RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 HSCBQ8IWL3 235 aa3.83□□□□□ -1.8
SBDSP1-204ENST00000453858 KLHL7Q8IXQ5 586 aa3.83□□□□□ -1.8
SBDSP1-204ENST00000453858 C5orf56Q8N8D9 126 aa3.83□□□□□ -1.8
SBDSP1-204ENST00000453858 BHLHE23Q8NDY6 225 aa3.83□□□□□ -1.8
SBDSP1-204ENST00000453858 OR5T2Q8NGG2 359 aa3.83□□□□□ -1.8
SBDSP1-204ENST00000453858 CDC26Q8NHZ8 85 aa3.83□□□□□ -1.8
SBDSP1-204ENST00000453858 FAM76AQ8TAV0 307 aa3.83□□□□□ -1.8
SBDSP1-204ENST00000453858 C7orf26Q96N11 449 aa3.83□□□□□ -1.8
SBDSP1-204ENST00000453858 OR4C12Q96R67 309 aa3.83□□□□□ -1.8
SBDSP1-204ENST00000453858 DGCR6LQ9BY27 220 aa3.83□□□□□ -1.8
SBDSP1-204ENST00000453858 NDEL1Q9GZM8 345 aa3.83□□□□□ -1.8
SBDSP1-204ENST00000453858 DNTTIP1Q9H147 329 aa3.83□□□□□ -1.8
SBDSP1-204ENST00000453858 WFDC10AQ9H1F0 79 aa3.83□□□□□ -1.8
SBDSP1-204ENST00000453858 CCNB1IP1Q9NPC3 277 aa3.83□□□□□ -1.8
SBDSP1-204ENST00000453858 POLE3Q9NRF9 147 aa3.83□□□□□ -1.8
SBDSP1-204ENST00000453858 TIMM10BQ9Y5J6 103 aa3.83□□□□□ -1.8
SBDSP1-204ENST00000453858 COMMD3-BMI1R4GMX3 469 aa3.83□□□□□ -1.8
SBDSP1-204ENST00000453858 MINOS1-NBL1R4GNA1 71 aa3.83□□□□□ -1.8
SBDSP1-204ENST00000453858 TEX13CA0A0J9YWL9 993 aa3.82□□□□□ -1.8
SBDSP1-204ENST00000453858 A0A1W2PPH5 198 aa3.82□□□□□ -1.8
SBDSP1-204ENST00000453858 CBY3A6NI87 242 aa3.82□□□□□ -1.8
SBDSP1-204ENST00000453858 C17orf98A8MV24 154 aa3.82□□□□□ -1.8
SBDSP1-204ENST00000453858 MIF4GDA9UHW6 222 aaKnown RBP3.82□□□□□ -1.8
SBDSP1-204ENST00000453858 H0Y980 276 aa3.82□□□□□ -1.8
SBDSP1-204ENST00000453858 SIGLEC5O15389 551 aa3.82□□□□□ -1.8
SBDSP1-204ENST00000453858 OR4F21O95013 312 aa3.82□□□□□ -1.8
SBDSP1-204ENST00000453858 KRT16P08779 473 aa3.82□□□□□ -1.8
SBDSP1-204ENST00000453858 ACAA1P09110 424 aaPredicted RBP3.82□□□□□ -1.8
SBDSP1-204ENST00000453858 FAM90A13PP0C7W8 464 aa3.82□□□□□ -1.8
SBDSP1-204ENST00000453858 FAM90A24PP0C7X0 464 aa3.82□□□□□ -1.8
SBDSP1-204ENST00000453858 GKN3PP0CG01 181 aa3.82□□□□□ -1.8
SBDSP1-204ENST00000453858 UMPSP11172 480 aa3.82□□□□□ -1.8
SBDSP1-204ENST00000453858 TNFRSF1BP20333 461 aa3.82□□□□□ -1.8
SBDSP1-204ENST00000453858 RPS4Y1P22090 263 aaKnown RBP3.82□□□□□ -1.8
SBDSP1-204ENST00000453858 POU1F1P28069 291 aa3.82□□□□□ -1.8
SBDSP1-204ENST00000453858 OTX1P32242 354 aaPredicted RBP3.82□□□□□ -1.8
SBDSP1-204ENST00000453858 P2RX3P56373 397 aa3.82□□□□□ -1.8
SBDSP1-204ENST00000453858 PUDPQ08623 228 aa3.82□□□□□ -1.8
SBDSP1-204ENST00000453858 BEND6Q5SZJ8 279 aaPredicted RBP3.82□□□□□ -1.8
SBDSP1-204ENST00000453858 PGAM4Q8N0Y7 254 aa3.82□□□□□ -1.8
SBDSP1-204ENST00000453858 UBL4BQ8N7F7 174 aa3.82□□□□□ -1.8
SBDSP1-204ENST00000453858 ANGPTL6Q8NI99 470 aa3.82□□□□□ -1.8
SBDSP1-204ENST00000453858 SCARB1Q8WTV0 552 aa3.82□□□□□ -1.8
SBDSP1-204ENST00000453858 CAPSLQ8WWF8 208 aa3.82□□□□□ -1.8
SBDSP1-204ENST00000453858 SLC7A6Q92536 515 aa3.82□□□□□ -1.8
SBDSP1-204ENST00000453858 TMEM18Q96B42 140 aa3.82□□□□□ -1.8
SBDSP1-204ENST00000453858 RASD2Q96D21 266 aa3.82□□□□□ -1.8
SBDSP1-204ENST00000453858 CHCHD6Q9BRQ6 235 aa3.82□□□□□ -1.8
SBDSP1-204ENST00000453858 RBM38Q9H0Z9 239 aaKnown RBP3.82□□□□□ -1.8
SBDSP1-204ENST00000453858 KCNN2Q9H2S1 579 aa3.82□□□□□ -1.8
SBDSP1-204ENST00000453858 OR51J1Q9H342 316 aa3.82□□□□□ -1.8
SBDSP1-204ENST00000453858 REEP4Q9H6H4 257 aa3.82□□□□□ -1.8
SBDSP1-204ENST00000453858 MRPL39Q9NYK5 338 aaKnown RBP3.82□□□□□ -1.8
SBDSP1-204ENST00000453858 PTTG3PQ9NZH4 202 aa3.82□□□□□ -1.8
SBDSP1-204ENST00000453858 ADA2Q9NZK5 511 aa3.82□□□□□ -1.8
SBDSP1-204ENST00000453858 STUB1Q9UNE7 303 aa3.82□□□□□ -1.8
SBDSP1-204ENST00000453858 WDR45Q9Y484 360 aa3.82□□□□□ -1.8
SBDSP1-204ENST00000453858 CCL27Q9Y4X3 112 aa3.82□□□□□ -1.8
SBDSP1-204ENST00000453858 POLR3HQ9Y535 204 aaPredicted RBP3.82□□□□□ -1.8
SBDSP1-204ENST00000453858 TNFRSF18Q9Y5U5 241 aa3.82□□□□□ -1.8
SBDSP1-204ENST00000453858 TRAV36DV7A0A075B6V5 113 aa3.81□□□□□ -1.8
SBDSP1-204ENST00000453858 DUXAA6NLW8 204 aa3.81□□□□□ -1.8
SBDSP1-204ENST00000453858 LSM1O15116 133 aaKnown RBP3.81□□□□□ -1.8
SBDSP1-204ENST00000453858 TOMM40O96008 361 aa3.81□□□□□ -1.8
SBDSP1-204ENST00000453858 KRT6AP02538 564 aa3.81□□□□□ -1.8
SBDSP1-204ENST00000453858 BGLAPP02818 100 aa3.81□□□□□ -1.8
SBDSP1-204ENST00000453858 CD74P04233 296 aa3.81□□□□□ -1.8
SBDSP1-204ENST00000453858 KRT6BP04259 564 aa3.81□□□□□ -1.8
SBDSP1-204ENST00000453858 IGKV2-30P06310 120 aa3.81□□□□□ -1.8
SBDSP1-204ENST00000453858 RPS17P08708 135 aaKnown RBP3.81□□□□□ -1.8
SBDSP1-204ENST00000453858 CST2P09228 141 aa3.81□□□□□ -1.8
SBDSP1-204ENST00000453858 CD7P09564 240 aa3.81□□□□□ -1.8
SBDSP1-204ENST00000453858 P0DMU3 169 aa3.81□□□□□ -1.8
SBDSP1-204ENST00000453858 FAM231AP0DMU4 169 aa3.81□□□□□ -1.8
SBDSP1-204ENST00000453858 FAM231CP0DMU5 169 aa3.81□□□□□ -1.8
SBDSP1-204ENST00000453858 CCL3L1P16619 93 aa3.81□□□□□ -1.8
SBDSP1-204ENST00000453858 CTRB1P17538 263 aa3.81□□□□□ -1.8
SBDSP1-204ENST00000453858 LAP3P28838 519 aa3.81□□□□□ -1.8
SBDSP1-204ENST00000453858 KRT6CP48668 564 aa3.81□□□□□ -1.8
SBDSP1-204ENST00000453858 CLNS1AP54105 237 aaKnown RBP3.81□□□□□ -1.8
SBDSP1-204ENST00000453858 MFAP2P55001 183 aa3.81□□□□□ -1.8
SBDSP1-204ENST00000453858 ENDOGQ14249 297 aaKnown RBP3.81□□□□□ -1.8
SBDSP1-204ENST00000453858 RSPO1Q2MKA7 263 aaPredicted RBP3.81□□□□□ -1.8
SBDSP1-204ENST00000453858 CCDC92Q53HC0 331 aaPredicted RBP3.81□□□□□ -1.8
SBDSP1-204ENST00000453858 MRPL2Q5T653 305 aaKnown RBP3.81□□□□□ -1.8
SBDSP1-204ENST00000453858 CTRB2Q6GPI1 263 aa3.81□□□□□ -1.8
SBDSP1-204ENST00000453858 C8orf74Q6P047 294 aa3.81□□□□□ -1.8
SBDSP1-204ENST00000453858 SMARCD3Q6STE5 483 aa3.81□□□□□ -1.8
SBDSP1-204ENST00000453858 KCTD8Q6ZWB6 473 aa3.81□□□□□ -1.8
SBDSP1-204ENST00000453858 MOB3CQ70IA8 216 aa3.81□□□□□ -1.8
SBDSP1-204ENST00000453858 SLC35D2Q76EJ3 337 aa3.81□□□□□ -1.8
SBDSP1-204ENST00000453858 SLC35E3Q7Z769 313 aa3.81□□□□□ -1.8
SBDSP1-204ENST00000453858 CMC1Q7Z7K0 106 aa3.81□□□□□ -1.8
SBDSP1-204ENST00000453858 CADM3Q8N126 398 aa3.81□□□□□ -1.8
SBDSP1-204ENST00000453858 CADM2Q8N3J6 435 aa3.81□□□□□ -1.8
SBDSP1-204ENST00000453858 UBALD1Q8TB05 177 aa3.81□□□□□ -1.8
SBDSP1-204ENST00000453858 MIPOL1Q8TD10 442 aa3.81□□□□□ -1.8
SBDSP1-204ENST00000453858 DEFB104AQ8WTQ1 72 aa3.81□□□□□ -1.8
SBDSP1-204ENST00000453858 SNAPC3Q92966 411 aa3.81□□□□□ -1.8
SBDSP1-204ENST00000453858 ROPN1LQ96C74 230 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms