RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 MGAT2Q10469 447 aa14.84□□□□□ -0.03
PMS1-213ENST00000441310 COL13A1Q5TAT6 717 aaPredicted RBP14.84□□□□□ -0.03
PMS1-213ENST00000441310 OR10J5Q8NHC4 309 aa14.84□□□□□ -0.03
PMS1-213ENST00000441310 SPACA7Q96KW9 195 aa14.84□□□□□ -0.03
PMS1-213ENST00000441310 NICN1Q9BSH3 213 aa14.84□□□□□ -0.03
PMS1-213ENST00000441310 OPN3Q9H1Y3 402 aaPredicted RBP14.84□□□□□ -0.03
PMS1-213ENST00000441310 WFDC1Q9HC57 220 aa14.84□□□□□ -0.03
PMS1-213ENST00000441310 IL17BQ9UHF5 180 aa14.84□□□□□ -0.03
PMS1-213ENST00000441310 ZNF264O43296 627 aa14.83□□□□□ -0.03
PMS1-213ENST00000441310 GMFGO60234 142 aa14.83□□□□□ -0.03
PMS1-213ENST00000441310 IGKV1D-16P01601 117 aa14.83□□□□□ -0.03
PMS1-213ENST00000441310 ACY1Q03154 408 aa14.83□□□□□ -0.03
PMS1-213ENST00000441310 ISXQ2M1V0 245 aa14.83□□□□□ -0.03
PMS1-213ENST00000441310 TMEM156Q8N614 296 aa14.83□□□□□ -0.03
PMS1-213ENST00000441310 BEND2Q8NDZ0 799 aa14.83□□□□□ -0.03
PMS1-213ENST00000441310 MMABQ96EY8 250 aaPredicted RBP14.83□□□□□ -0.03
PMS1-213ENST00000441310 CBLN4Q9NTU7 201 aa14.83□□□□□ -0.03
PMS1-213ENST00000441310 TMEM269A0A1B0GVZ9 245 aa14.83□□□□□ -0.04
PMS1-213ENST00000441310 RENP00797 406 aa14.83□□□□□ -0.04
PMS1-213ENST00000441310 NPSP0C0P6 89 aa14.83□□□□□ -0.04
PMS1-213ENST00000441310 SRFP11831 508 aa14.83□□□□□ -0.04
PMS1-213ENST00000441310 GPR137CQ8N3F9 429 aa14.83□□□□□ -0.04
PMS1-213ENST00000441310 DTD1Q8TEA8 209 aa14.83□□□□□ -0.04
PMS1-213ENST00000441310 FAM210BQ96KR6 192 aa14.83□□□□□ -0.04
PMS1-213ENST00000441310 TSPAN32Q96QS1 320 aa14.83□□□□□ -0.04
PMS1-213ENST00000441310 PHF7Q9BWX1 381 aaPredicted RBP14.83□□□□□ -0.04
PMS1-213ENST00000441310 RFNGQ9Y644 331 aa14.83□□□□□ -0.04
PMS1-213ENST00000441310 MUC3AQ02505 3323 aa14.83□□□□□ -0.04
PMS1-213ENST00000441310 LRP4O75096 1905 aa14.83□□□□□ -0.04
PMS1-213ENST00000441310 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.83□□□□□ -0.04
PMS1-213ENST00000441310 IL18BPO95998 194 aa14.83□□□□□ -0.04
PMS1-213ENST00000441310 CD38P28907 300 aa14.83□□□□□ -0.04
PMS1-213ENST00000441310 CCR4P51679 360 aa14.83□□□□□ -0.04
PMS1-213ENST00000441310 UBE2ZQ9H832 354 aaPredicted RBP14.83□□□□□ -0.04
PMS1-213ENST00000441310 BORCS7-ASMTA0A0B4J1R7 106 aa14.82□□□□□ -0.04
PMS1-213ENST00000441310 OR6A2O95222 327 aa14.82□□□□□ -0.04
PMS1-213ENST00000441310 SEC11BP0C7V7 166 aa14.82□□□□□ -0.04
PMS1-213ENST00000441310 PLXDC2Q6UX71 529 aa14.82□□□□□ -0.04
PMS1-213ENST00000441310 ZNF429Q86V71 674 aa14.82□□□□□ -0.04
PMS1-213ENST00000441310 EMC9Q9Y3B6 208 aa14.82□□□□□ -0.04
PMS1-213ENST00000441310 THADAQ6YHU6 1953 aa14.82□□□□□ -0.04
PMS1-213ENST00000441310 CCDC187A0A096LP49 1063 aa14.82□□□□□ -0.04
PMS1-213ENST00000441310 IGHV5-51A0A0C4DH38 117 aa14.82□□□□□ -0.04
PMS1-213ENST00000441310 MEGF11A6BM72 1044 aa14.82□□□□□ -0.04
PMS1-213ENST00000441310 A6NNC1 897 aa14.82□□□□□ -0.04
PMS1-213ENST00000441310 FOXS1O43638 330 aa14.82□□□□□ -0.04
PMS1-213ENST00000441310 OR5H8P0DN80 308 aa14.82□□□□□ -0.04
PMS1-213ENST00000441310 S1PR1P21453 382 aa14.82□□□□□ -0.04
PMS1-213ENST00000441310 GNALP38405 381 aa14.82□□□□□ -0.04
PMS1-213ENST00000441310 ASCL1P50553 236 aa14.82□□□□□ -0.04
PMS1-213ENST00000441310 SLC22A25Q6T423 547 aa14.82□□□□□ -0.04
PMS1-213ENST00000441310 PRSS58Q8IYP2 241 aa14.82□□□□□ -0.04
PMS1-213ENST00000441310 LRRC18Q8N456 261 aa14.82□□□□□ -0.04
PMS1-213ENST00000441310 GPX7Q96SL4 187 aaPredicted RBP14.82□□□□□ -0.04
PMS1-213ENST00000441310 IGKV1D-42A0A075B6H8 117 aa14.81□□□□□ -0.04
PMS1-213ENST00000441310 XRCC2O43543 280 aa14.81□□□□□ -0.04
PMS1-213ENST00000441310 DEDDO75618 318 aa14.81□□□□□ -0.04
PMS1-213ENST00000441310 CSTAP01040 98 aa14.81□□□□□ -0.04
PMS1-213ENST00000441310 MMP7P09237 267 aaPredicted RBP14.81□□□□□ -0.04
PMS1-213ENST00000441310 RAB38P57729 211 aa14.81□□□□□ -0.04
PMS1-213ENST00000441310 RPL18Q07020 188 aaKnown RBP14.81□□□□□ -0.04
PMS1-213ENST00000441310 NPSR1Q6W5P4 371 aa14.81□□□□□ -0.04
PMS1-213ENST00000441310 DTWD2Q8NBA8 298 aa14.81□□□□□ -0.04
PMS1-213ENST00000441310 LOC107986453A0A1B0GWG9 222 aa14.81□□□□□ -0.04
PMS1-213ENST00000441310 VSIG8P0DPA2 414 aa14.81□□□□□ -0.04
PMS1-213ENST00000441310 ZP2Q05996 745 aa14.81□□□□□ -0.04
PMS1-213ENST00000441310 HIKESHIQ53FT3 197 aa14.81□□□□□ -0.04
PMS1-213ENST00000441310 THNSL2Q86YJ6 484 aa14.81□□□□□ -0.04
PMS1-213ENST00000441310 NPRL2Q8WTW4 380 aa14.81□□□□□ -0.04
PMS1-213ENST00000441310 Q9N2J8 555 aa14.81□□□□□ -0.04
PMS1-213ENST00000441310 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.81□□□□□ -0.04
PMS1-213ENST00000441310 ZDBF2Q9HCK1 2354 aa14.81□□□□□ -0.04
PMS1-213ENST00000441310 C11orf98E9PRG8 122 aa14.81□□□□□ -0.04
PMS1-213ENST00000441310 APOBEC1P41238 236 aaKnown RBP14.81□□□□□ -0.04
PMS1-213ENST00000441310 PSG6Q00889 435 aa14.81□□□□□ -0.04
PMS1-213ENST00000441310 PCK2Q16822 640 aa14.81□□□□□ -0.04
PMS1-213ENST00000441310 C1QL3Q5VWW1 255 aa14.81□□□□□ -0.04
PMS1-213ENST00000441310 PLPP5Q8NEB5 264 aa14.81□□□□□ -0.04
PMS1-213ENST00000441310 OR52N4Q8NGI2 321 aa14.81□□□□□ -0.04
PMS1-213ENST00000441310 OR5H2Q8NGV7 314 aa14.81□□□□□ -0.04
PMS1-213ENST00000441310 FNDC9Q8TBE3 224 aa14.81□□□□□ -0.04
PMS1-213ENST00000441310 SPACA5Q96QH8 159 aa14.81□□□□□ -0.04
PMS1-213ENST00000441310 TMEM208Q9BTX3 173 aa14.81□□□□□ -0.04
PMS1-213ENST00000441310 GPR87Q9BY21 358 aa14.81□□□□□ -0.04
PMS1-213ENST00000441310 HHLA2Q9UM44 414 aa14.81□□□□□ -0.04
PMS1-213ENST00000441310 WDFY4Q6ZS81 3184 aa14.8□□□□□ -0.04
PMS1-213ENST00000441310 RBFOX3A6NFN3 312 aa14.8□□□□□ -0.04
PMS1-213ENST00000441310 TLCD2A6NGC4 264 aa14.8□□□□□ -0.04
PMS1-213ENST00000441310 CDRT15L2A8MXV6 281 aa14.8□□□□□ -0.04
PMS1-213ENST00000441310 HSD17B6O14756 317 aa14.8□□□□□ -0.04
PMS1-213ENST00000441310 AMBPP02760 352 aa14.8□□□□□ -0.04
PMS1-213ENST00000441310 TBPP20226 339 aa14.8□□□□□ -0.04
PMS1-213ENST00000441310 FPR2P25090 351 aa14.8□□□□□ -0.04
PMS1-213ENST00000441310 RBMXP38159 391 aaKnown RBP14.8□□□□□ -0.04
PMS1-213ENST00000441310 EMP2P54851 167 aa14.8□□□□□ -0.04
PMS1-213ENST00000441310 PPA1Q15181 289 aa14.8□□□□□ -0.04
PMS1-213ENST00000441310 C1orf100Q5SVJ3 147 aa14.8□□□□□ -0.04
PMS1-213ENST00000441310 OR13G1Q8NGZ3 307 aa14.8□□□□□ -0.04
PMS1-213ENST00000441310 ABHD14AQ9BUJ0 271 aa14.8□□□□□ -0.04
PMS1-213ENST00000441310 TWSG1Q9GZX9 223 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms