RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 PGA3P0DJD8 388 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 BCL2P10415 239 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 ESDP10768 282 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 CEACAM1P13688 526 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 CTSEP14091 401 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 ZNF708P17019 499 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 ZNF28P17035 718 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 ZNF43P17038 809 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 CSRP1P21291 193 aaKnown RBP4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 ZNF10P21506 573 aaPredicted RBP4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 IGFBP4P22692 258 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 RPS12P25398 132 aaKnown RBP4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 GRNP28799 593 aaKnown RBP4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 CCKBRP32239 447 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 APLNRP35414 380 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 GRK6P43250 576 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 GALR1P47211 349 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 SOX2P48431 317 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 PRLHRP49683 370 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 EFNA3P52797 238 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 TAS2R30P59541 319 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 CSNK1G2P78368 415 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 BTG2P78543 158 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 COL10A1Q03692 680 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 TLE3Q04726 772 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 IL15RAQ13261 267 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 TRA2AQ13595 282 aaKnown RBP eCLIP4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 OR1Q1Q15612 314 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 ZNF74Q16587 644 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 BSXQ3C1V8 233 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 ZNF684Q5T5D7 378 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 C1orf185Q5T7R7 199 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 AADACL3Q5VUY0 350 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 YOD1Q5VVQ6 348 aaPredicted RBP4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 TMEM225Q6GV28 225 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 KIRREL2Q6UWL6 708 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 TMEM182Q6ZP80 229 aaPredicted RBP4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 GTF2H5Q6ZYL4 71 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 COX15Q7KZN9 410 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 NUP54Q7Z3B4 507 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 MRGPRGQ86SM5 289 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 MAML2Q8IZL2 1156 aaPredicted RBP4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 SLC22A24Q8N4F4 322 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 CYB561D1Q8N8Q1 229 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 CCDC71LQ8N9Z2 235 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 CHST4Q8NCG5 386 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 NUP43Q8NFH3 380 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 OR5AU1Q8NGC0 362 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 OR2I1PQ8NGU4 316 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 OR2G3Q8NGZ4 309 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 OR2T10Q8NGZ9 312 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 OR4K13Q8NH42 304 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 OR14C36Q8NHC7 312 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 MARCH1Q8TCQ1 289 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 RNASE8Q8TDE3 154 aaKnown RBP4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 ADAMTS18Q8TE60 1221 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 PGAM5Q96HS1 289 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 LMLNQ96KR4 655 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 CAPNS2Q96L46 248 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 SGCZQ96LD1 299 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 C4orf45Q96LM5 186 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 GABRG3Q99928 467 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 ALG12Q9BV10 488 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 ELOVL1Q9BW60 279 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 SF3B5Q9BWJ5 86 aaKnown RBP4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 SLC46A2Q9BY10 475 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 CXCL16Q9H2A7 254 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 GLIPR2Q9H4G4 154 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 GOLGA2P5Q9HBQ8 144 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 ANKRD10Q9NXR5 420 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 MRPL27Q9P0M9 148 aaKnown RBP4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 KLK13Q9UKR3 277 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 ANAPC10Q9UM13 185 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 HHLA2Q9UM44 414 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 LAMP3Q9UQV4 416 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 TMED7Q9Y3B3 224 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 PTRH2Q9Y3E5 179 aaKnown RBP4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 HS3ST3B1Q9Y662 390 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 ZFP37Q9Y6Q3 630 aaPredicted RBP4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 COL16A1Q07092 1604 aaPredicted RBP4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 A0A0D9SEW6 157 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 MBLAC1A4D2B0 266 aaPredicted RBP4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 MEIS3P1A6NDR6 274 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 ZNF727A8MUV8 499 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 SERPINE3A8MV23 424 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 UPK3BL1B0FP48 263 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 ZNF814B7Z6K7 855 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 UPK3BL2E5RIL1 263 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 TRAPPC2LH3BP13 241 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 FAM229AH3BQW9 127 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 TGFBR3LH3BV60 316 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 SIRPB1O00241 398 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 ETV2O00321 342 aaPredicted RBP4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 SCDO00767 359 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 PTGESO14684 152 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 RAMP3O60896 148 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 ALOX12BO75342 701 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 B3GAT3O94766 335 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 CLDN7O95471 211 aa4.97□□□□□ -1.61
VTI1BP4-201ENST00000427516 TBX18O95935 607 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms