RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 ZMAT3Q9HA38 289 aaKnown RBP13.06□□□□□ -0.32
ACTB-204ENST00000425660 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.06□□□□□ -0.32
ACTB-204ENST00000425660 NPAP1Q9NZP6 1156 aa13.06□□□□□ -0.32
ACTB-204ENST00000425660 CRIM1Q9NZV1 1036 aa13.06□□□□□ -0.32
ACTB-204ENST00000425660 MPC1Q9Y5U8 109 aa13.06□□□□□ -0.32
ACTB-204ENST00000425660 AGFG2O95081 481 aa13.06□□□□□ -0.32
ACTB-204ENST00000425660 MT-ND4P03905 459 aa13.06□□□□□ -0.32
ACTB-204ENST00000425660 GSTP1P09211 210 aaKnown RBP13.06□□□□□ -0.32
ACTB-204ENST00000425660 CECR9P0C854 216 aa13.06□□□□□ -0.32
ACTB-204ENST00000425660 TUBG1P23258 451 aa13.06□□□□□ -0.32
ACTB-204ENST00000425660 GIFP27352 417 aa13.06□□□□□ -0.32
ACTB-204ENST00000425660 PPP1CBP62140 327 aa13.06□□□□□ -0.32
ACTB-204ENST00000425660 KLRB1Q12918 225 aa13.06□□□□□ -0.32
ACTB-204ENST00000425660 CDNFQ49AH0 187 aa13.06□□□□□ -0.32
ACTB-204ENST00000425660 PLAC9Q5JTB6 97 aa13.06□□□□□ -0.32
ACTB-204ENST00000425660 MYO7BQ6PIF6 2116 aa13.06□□□□□ -0.32
ACTB-204ENST00000425660 ZSCAN4Q8NAM6 433 aaPredicted RBP13.06□□□□□ -0.32
ACTB-204ENST00000425660 CACNG6Q9BXT2 260 aa13.06□□□□□ -0.32
ACTB-204ENST00000425660 SELENOIQ9C0D9 397 aa13.06□□□□□ -0.32
ACTB-204ENST00000425660 FGF23Q9GZV9 251 aaPredicted RBP13.06□□□□□ -0.32
ACTB-204ENST00000425660 METTL9Q9H1A3 318 aa13.06□□□□□ -0.32
ACTB-204ENST00000425660 TUBG2Q9NRH3 451 aa13.06□□□□□ -0.32
ACTB-204ENST00000425660 MRPL15Q9P015 296 aaKnown RBP13.06□□□□□ -0.32
ACTB-204ENST00000425660 ELF5Q9UKW6 265 aaPredicted RBP13.06□□□□□ -0.32
ACTB-204ENST00000425660 KCNK7Q9Y2U2 307 aa13.06□□□□□ -0.32
ACTB-204ENST00000425660 A0A0G2JNJ9 132 aa13.05□□□□□ -0.32
ACTB-204ENST00000425660 SOCS1O15524 211 aa13.05□□□□□ -0.32
ACTB-204ENST00000425660 TCRBP04435 133 aa13.05□□□□□ -0.32
ACTB-204ENST00000425660 RAC2P15153 192 aa13.05□□□□□ -0.32
ACTB-204ENST00000425660 HIST1H1DP16402 221 aaKnown RBP13.05□□□□□ -0.32
ACTB-204ENST00000425660 SERPINA2P20848 420 aa13.05□□□□□ -0.32
ACTB-204ENST00000425660 CPT2P23786 658 aa13.05□□□□□ -0.32
ACTB-204ENST00000425660 IL32P24001 234 aa13.05□□□□□ -0.32
ACTB-204ENST00000425660 RBPJQ06330 500 aa13.05□□□□□ -0.32
ACTB-204ENST00000425660 C11orf91Q3C1V1 193 aa13.05□□□□□ -0.32
ACTB-204ENST00000425660 C3orf36Q3SXR2 165 aa13.05□□□□□ -0.32
ACTB-204ENST00000425660 TMEM255AQ5JRV8 349 aa13.05□□□□□ -0.32
ACTB-204ENST00000425660 UNQ6126/PRO20091Q6UXV3 157 aa13.05□□□□□ -0.32
ACTB-204ENST00000425660 MRGPRGQ86SM5 289 aa13.05□□□□□ -0.32
ACTB-204ENST00000425660 ZNF554Q86TJ5 538 aa13.05□□□□□ -0.32
ACTB-204ENST00000425660 OR5A2Q8NGI9 324 aa13.05□□□□□ -0.32
ACTB-204ENST00000425660 RAB3CQ96E17 227 aa13.05□□□□□ -0.32
ACTB-204ENST00000425660 MRPS24Q96EL2 167 aaKnown RBP13.05□□□□□ -0.32
ACTB-204ENST00000425660 RNF170Q96K19 258 aa13.05□□□□□ -0.32
ACTB-204ENST00000425660 Q96M66 194 aa13.05□□□□□ -0.32
ACTB-204ENST00000425660 Q9UFV3 132 aa13.05□□□□□ -0.32
ACTB-204ENST00000425660 NUBP2Q9Y5Y2 271 aa13.05□□□□□ -0.32
ACTB-204ENST00000425660 IGHV1-18A0A0C4DH31 117 aa13.04□□□□□ -0.32
ACTB-204ENST00000425660 IGKV1-12A0A0C4DH73 117 aa13.04□□□□□ -0.32
ACTB-204ENST00000425660 ANKRD30BLA7E2S9 258 aa13.04□□□□□ -0.32
ACTB-204ENST00000425660 MFNGO00587 321 aa13.04□□□□□ -0.32
ACTB-204ENST00000425660 SPRY1O43609 319 aaPredicted RBP13.04□□□□□ -0.32
ACTB-204ENST00000425660 IGKV1D-12P01611 117 aa13.04□□□□□ -0.32
ACTB-204ENST00000425660 GTF2F2P13984 249 aa13.04□□□□□ -0.32
ACTB-204ENST00000425660 GNB3P16520 340 aa13.04□□□□□ -0.32
ACTB-204ENST00000425660 RAG2P55895 527 aa13.04□□□□□ -0.32
ACTB-204ENST00000425660 BTG1P62324 171 aa13.04□□□□□ -0.32
ACTB-204ENST00000425660 TATDN3Q17R31 274 aa13.04□□□□□ -0.32
ACTB-204ENST00000425660 CALHM1Q8IU99 346 aa13.04□□□□□ -0.32
ACTB-204ENST00000425660 C1orf174Q8IYL3 243 aa13.04□□□□□ -0.32
ACTB-204ENST00000425660 CHST4Q8NCG5 386 aa13.04□□□□□ -0.32
ACTB-204ENST00000425660 Q8NFD4 153 aa13.04□□□□□ -0.32
ACTB-204ENST00000425660 OR51T1Q8NGJ9 327 aa13.04□□□□□ -0.32
ACTB-204ENST00000425660 OR10K1Q8NGX5 313 aa13.04□□□□□ -0.32
ACTB-204ENST00000425660 OR5P3Q8WZ94 311 aa13.04□□□□□ -0.32
ACTB-204ENST00000425660 S100PBPQ96BU1 408 aa13.04□□□□□ -0.32
ACTB-204ENST00000425660 C1QTNF6Q9BXI9 259 aa13.04□□□□□ -0.32
ACTB-204ENST00000425660 OR2J1Q9GZK6 312 aa13.04□□□□□ -0.32
ACTB-204ENST00000425660 OR51B6Q9H340 312 aa13.04□□□□□ -0.32
ACTB-204ENST00000425660 RP1L1Q8IWN7 2480 aaPredicted RBP13.04□□□□□ -0.32
ACTB-204ENST00000425660 INMT-MINDY4F8WBC2 141 aa13.04□□□□□ -0.32
ACTB-204ENST00000425660 ANGPTL7O43827 346 aa13.04□□□□□ -0.32
ACTB-204ENST00000425660 LILRA1O75019 489 aa13.04□□□□□ -0.32
ACTB-204ENST00000425660 BMP5P22003 454 aa13.04□□□□□ -0.32
ACTB-204ENST00000425660 FAUP35544 74 aaKnown RBP13.04□□□□□ -0.32
ACTB-204ENST00000425660 CCR6P51684 374 aa13.04□□□□□ -0.32
ACTB-204ENST00000425660 RSU1Q15404 277 aa13.04□□□□□ -0.32
ACTB-204ENST00000425660 PNLIPRP3Q17RR3 467 aa13.04□□□□□ -0.32
ACTB-204ENST00000425660 SPATA46Q5T0L3 261 aa13.04□□□□□ -0.32
ACTB-204ENST00000425660 RSBN1Q5VWQ0 802 aaPredicted RBP13.04□□□□□ -0.32
ACTB-204ENST00000425660 OR2T2Q6IF00 324 aa13.04□□□□□ -0.32
ACTB-204ENST00000425660 ZNF611Q8N823 705 aa13.04□□□□□ -0.32
ACTB-204ENST00000425660 TMEM229BQ8NBD8 167 aa13.04□□□□□ -0.32
ACTB-204ENST00000425660 BHLHE23Q8NDY6 225 aa13.04□□□□□ -0.32
ACTB-204ENST00000425660 POM121Q96HA1 1249 aa13.04□□□□□ -0.32
ACTB-204ENST00000425660 PRORYQ9H606 182 aa13.04□□□□□ -0.32
ACTB-204ENST00000425660 ELL3Q9HB65 397 aaPredicted RBP13.04□□□□□ -0.32
ACTB-204ENST00000425660 NUDT15Q9NV35 164 aa13.04□□□□□ -0.32
ACTB-204ENST00000425660 JKAMPQ9P055 326 aa13.04□□□□□ -0.32
ACTB-204ENST00000425660 NBEAQ8NFP9 2946 aa13.03□□□□□ -0.32
ACTB-204ENST00000425660 OR5B21A6NL26 309 aa13.03□□□□□ -0.32
ACTB-204ENST00000425660 AKR7A2O43488 359 aa13.03□□□□□ -0.32
ACTB-204ENST00000425660 CSTBP04080 98 aaKnown RBP13.03□□□□□ -0.32
ACTB-204ENST00000425660 RAD52P43351 418 aa13.03□□□□□ -0.32
ACTB-204ENST00000425660 TAS2R19P59542 299 aa13.03□□□□□ -0.32
ACTB-204ENST00000425660 ARL6IP1Q15041 203 aa13.03□□□□□ -0.32
ACTB-204ENST00000425660 BTN2A1Q7KYR7 527 aa13.03□□□□□ -0.32
ACTB-204ENST00000425660 FJX1Q86VR8 437 aa13.03□□□□□ -0.32
ACTB-204ENST00000425660 TMEM200AQ86VY9 491 aa13.03□□□□□ -0.32
ACTB-204ENST00000425660 SAXO1Q8IYX7 474 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms