RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 PRR3P79522 188 aaKnown RBP2.11□□□□□ -2.07
HMGB1P49-201ENST00000418882 TWF1Q12792 350 aa2.11□□□□□ -2.07
HMGB1P49-201ENST00000418882 BNIP2Q12982 314 aa2.11□□□□□ -2.07
HMGB1P49-201ENST00000418882 ZNF266Q14584 549 aa2.11□□□□□ -2.07
HMGB1P49-201ENST00000418882 KIR2DS1Q14954 304 aa2.11□□□□□ -2.07
HMGB1P49-201ENST00000418882 GUSBP1Q15486 140 aa2.11□□□□□ -2.07
HMGB1P49-201ENST00000418882 OR4D1Q15615 310 aa2.11□□□□□ -2.07
HMGB1P49-201ENST00000418882 BCL2A1Q16548 175 aa2.11□□□□□ -2.07
HMGB1P49-201ENST00000418882 SNRNP35Q16560 246 aaKnown RBP2.11□□□□□ -2.07
HMGB1P49-201ENST00000418882 SMUG1Q53HV7 270 aa2.11□□□□□ -2.07
HMGB1P49-201ENST00000418882 ANKRD22Q5VYY1 191 aa2.11□□□□□ -2.07
HMGB1P49-201ENST00000418882 AP1ARQ63HQ0 302 aa2.11□□□□□ -2.07
HMGB1P49-201ENST00000418882 OAFQ86UD1 273 aa2.11□□□□□ -2.07
HMGB1P49-201ENST00000418882 FUNDC1Q8IVP5 155 aa2.11□□□□□ -2.07
HMGB1P49-201ENST00000418882 DAW1Q8N136 415 aa2.11□□□□□ -2.07
HMGB1P49-201ENST00000418882 NPWQ8N729 165 aa2.11□□□□□ -2.07
HMGB1P49-201ENST00000418882 DNAAF3Q8N9W5 541 aa2.11□□□□□ -2.07
HMGB1P49-201ENST00000418882 C11orf72Q8NBR9 251 aa2.11□□□□□ -2.07
HMGB1P49-201ENST00000418882 OR8J2Q8NGG1 315 aa2.11□□□□□ -2.07
HMGB1P49-201ENST00000418882 OR6K2Q8NGY2 324 aa2.11□□□□□ -2.07
HMGB1P49-201ENST00000418882 OR10J6PQ8NGY7 276 aa2.11□□□□□ -2.07
HMGB1P49-201ENST00000418882 CIRBP-AS1Q8TBR5 109 aa2.11□□□□□ -2.07
HMGB1P49-201ENST00000418882 CCDC127Q96BQ5 260 aa2.11□□□□□ -2.07
HMGB1P49-201ENST00000418882 MBOAT7Q96N66 472 aa2.11□□□□□ -2.07
HMGB1P49-201ENST00000418882 ZNF382Q96SR6 550 aa2.11□□□□□ -2.07
HMGB1P49-201ENST00000418882 MICU1Q9BPX6 476 aa2.11□□□□□ -2.07
HMGB1P49-201ENST00000418882 VCX3AQ9NNX9 186 aa2.11□□□□□ -2.07
HMGB1P49-201ENST00000418882 RHBDL2Q9NX52 303 aa2.11□□□□□ -2.07
HMGB1P49-201ENST00000418882 UVRAGQ9P2Y5 699 aa2.11□□□□□ -2.07
HMGB1P49-201ENST00000418882 NAGKQ9UJ70 344 aa2.11□□□□□ -2.07
HMGB1P49-201ENST00000418882 PSMD13Q9UNM6 376 aa2.11□□□□□ -2.07
HMGB1P49-201ENST00000418882 ZNF257Q9Y2Q1 563 aa2.11□□□□□ -2.07
HMGB1P49-201ENST00000418882 SIGLEC9Q9Y336 463 aa2.11□□□□□ -2.07
HMGB1P49-201ENST00000418882 SNX24Q9Y343 169 aa2.11□□□□□ -2.07
HMGB1P49-201ENST00000418882 RAD50Q92878 1312 aa2.11□□□□□ -2.07
HMGB1P49-201ENST00000418882 TMEM213A2RRL7 107 aa2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 A6NDN8 102 aa2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 SEC14L6B5MCN3 397 aa2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 F8VZ95 297 aa2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 H7C0C1 242 aa2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 H7C417 338 aa2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 J3QLI3 93 aa2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 PLPP3O14495 311 aa2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 CDIPTO14735 213 aa2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 CTNSO60931 367 aa2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 HPRT1P00492 218 aa2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 IGKV1D-16P01601 117 aa2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 CD8AP01732 235 aa2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 OR56A5P0C7T3 313 aa2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 ZNF806P0C7X5 589 aa2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 HLA-DMAP28067 261 aa2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 RANBP1P43487 201 aa2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 DNASE1L1P49184 302 aa2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 RPL14P50914 215 aaKnown RBP2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 AQP5P55064 265 aa2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 ZNF121P58317 390 aaPredicted RBP2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 ARG2P78540 354 aa2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 PITPNAQ00169 270 aa2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 CLINT1Q14677 625 aa2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 CLEC18BQ6UXF7 455 aa2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 FAM151BQ6UXP7 276 aa2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 PAGE2Q7Z2X7 111 aa2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 LRRC6Q86X45 466 aa2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 FAM71AQ8IYT1 594 aa2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 ATPAF2Q8N5M1 289 aa2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 TMEM156Q8N614 296 aa2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 LINC00304Q8N9R0 145 aa2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 SNX31Q8N9S9 440 aa2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 OR6K6Q8NGW6 343 aa2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 C17orf50Q8WW18 174 aa2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 TMEM234Q8WY98 164 aa2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 RORBQ92753 470 aa2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 FLYWCH2Q96CP2 140 aaKnown RBP2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 DNAJC1Q96KC8 554 aaKnown RBP2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 FAM19A4Q96LR4 140 aa2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 ZNF251Q9BRH9 671 aa2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 CALN1Q9BXU9 219 aa2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 OR51B5Q9H339 312 aa2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 SLC39A1Q9NY26 324 aa2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 MTFP1Q9UDX5 166 aa2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 FBXL3Q9UKT7 428 aa2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 CES1P1Q9UKY3 287 aa2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 CBY1Q9Y3M2 126 aa2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 AK9Q5TCS8 1911 aa2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 ABCB11O95342 1321 aa2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 PCDH11XQ9BZA7 1347 aa2.1□□□□□ -2.07
HMGB1P49-201ENST00000418882 TSPOAP1O95153 1857 aa2.09□□□□□ -2.07
HMGB1P49-201ENST00000418882 A0A1B0GX12 115 aa2.09□□□□□ -2.07
HMGB1P49-201ENST00000418882 ZNF850A8MQ14 1090 aa2.09□□□□□ -2.07
HMGB1P49-201ENST00000418882 FGF16O43320 207 aa2.09□□□□□ -2.07
HMGB1P49-201ENST00000418882 CRTAPO75718 401 aaPredicted RBP2.09□□□□□ -2.07
HMGB1P49-201ENST00000418882 CDRT1O95170 752 aa2.09□□□□□ -2.07
HMGB1P49-201ENST00000418882 APCSP02743 223 aa2.09□□□□□ -2.07
HMGB1P49-201ENST00000418882 CALM1P0DP23 149 aa2.09□□□□□ -2.07
HMGB1P49-201ENST00000418882 CALM2P0DP24 149 aa2.09□□□□□ -2.07
HMGB1P49-201ENST00000418882 CALM3P0DP25 149 aa2.09□□□□□ -2.07
HMGB1P49-201ENST00000418882 HSPD1P10809 573 aaKnown RBP2.09□□□□□ -2.07
HMGB1P49-201ENST00000418882 GFAPP14136 432 aa2.09□□□□□ -2.07
HMGB1P49-201ENST00000418882 RAB5AP20339 215 aa2.09□□□□□ -2.07
HMGB1P49-201ENST00000418882 MYCNOSP40205 109 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms