RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 EXOSC1Q9Y3B2 195 aaKnown RBP15.46■□□□□ 0.07
CHTOP-202ENST00000368687 EFCAB10A6NFE3 127 aa15.45■□□□□ 0.06
CHTOP-202ENST00000368687 CLIC3O95833 236 aa15.45■□□□□ 0.06
CHTOP-202ENST00000368687 PIPP12273 146 aaPredicted RBP15.45■□□□□ 0.06
CHTOP-202ENST00000368687 ZFP36P26651 326 aaKnown RBP15.45■□□□□ 0.06
CHTOP-202ENST00000368687 KIR3DL2P43630 455 aa15.45■□□□□ 0.06
CHTOP-202ENST00000368687 TGM4P49221 684 aa15.45■□□□□ 0.06
CHTOP-202ENST00000368687 ALKBH1Q13686 389 aaKnown RBP15.45■□□□□ 0.06
CHTOP-202ENST00000368687 CNN3Q15417 329 aaKnown RBP15.45■□□□□ 0.06
CHTOP-202ENST00000368687 SMN1Q16637 294 aaKnown RBP15.45■□□□□ 0.06
CHTOP-202ENST00000368687 CCDC58Q4VC31 144 aa15.45■□□□□ 0.06
CHTOP-202ENST00000368687 NANPQ8TBE9 248 aa15.45■□□□□ 0.06
CHTOP-202ENST00000368687 TFAP2CQ92754 450 aa15.45■□□□□ 0.06
CHTOP-202ENST00000368687 COMMD4Q9H0A8 199 aa15.45■□□□□ 0.06
CHTOP-202ENST00000368687 C7orf69Q9H7B7 122 aa15.45■□□□□ 0.06
CHTOP-202ENST00000368687 NEK6Q9HC98 313 aa15.45■□□□□ 0.06
CHTOP-202ENST00000368687 RASL12Q9NYN1 266 aa15.45■□□□□ 0.06
CHTOP-202ENST00000368687 CNOT2Q9NZN8 540 aaKnown RBP15.45■□□□□ 0.06
CHTOP-202ENST00000368687 DIMT1Q9UNQ2 313 aaKnown RBP15.45■□□□□ 0.06
CHTOP-202ENST00000368687 CAB39Q9Y376 341 aaPredicted RBP15.45■□□□□ 0.06
CHTOP-202ENST00000368687 NKX6-3A6NJ46 265 aa15.44■□□□□ 0.06
CHTOP-202ENST00000368687 J3QT63 122 aa15.44■□□□□ 0.06
CHTOP-202ENST00000368687 GPR37O15354 613 aa15.44■□□□□ 0.06
CHTOP-202ENST00000368687 PHF1O43189 567 aaPredicted RBP15.44■□□□□ 0.06
CHTOP-202ENST00000368687 ADAM20O43506 726 aa15.44■□□□□ 0.06
CHTOP-202ENST00000368687 ECDO95905 644 aaPredicted RBP15.44■□□□□ 0.06
CHTOP-202ENST00000368687 PPIAL4GP0DN37 164 aa15.44■□□□□ 0.06
CHTOP-202ENST00000368687 ZNF20P17024 532 aa15.44■□□□□ 0.06
CHTOP-202ENST00000368687 SEC61A1P61619 476 aaKnown RBP15.44■□□□□ 0.06
CHTOP-202ENST00000368687 WDR25Q64LD2 544 aaPredicted RBP15.44■□□□□ 0.06
CHTOP-202ENST00000368687 C1QL2Q7Z5L3 287 aa15.44■□□□□ 0.06
CHTOP-202ENST00000368687 ZNF676Q8N7Q3 588 aa15.44■□□□□ 0.06
CHTOP-202ENST00000368687 RNF166Q96A37 237 aaPredicted RBP15.44■□□□□ 0.06
CHTOP-202ENST00000368687 MDFIQ99750 246 aa15.44■□□□□ 0.06
CHTOP-202ENST00000368687 TMPRSS13Q9BYE2 586 aa15.44■□□□□ 0.06
CHTOP-202ENST00000368687 METTL17Q9H7H0 456 aaPredicted RBP15.44■□□□□ 0.06
CHTOP-202ENST00000368687 NKX1-2Q9UD57 310 aaPredicted RBP15.44■□□□□ 0.06
CHTOP-202ENST00000368687 INSIG2Q9Y5U4 225 aa15.44■□□□□ 0.06
CHTOP-202ENST00000368687 PQLC2LA1A4F0 135 aa15.43■□□□□ 0.06
CHTOP-202ENST00000368687 OR4C45A6NMZ5 311 aa15.43■□□□□ 0.06
CHTOP-202ENST00000368687 TNFRSF13BO14836 293 aaPredicted RBP15.43■□□□□ 0.06
CHTOP-202ENST00000368687 TMPRSS2O15393 492 aa15.43■□□□□ 0.06
CHTOP-202ENST00000368687 ENSAO43768 121 aaKnown RBP15.43■□□□□ 0.06
CHTOP-202ENST00000368687 GYPAP02724 150 aa15.43■□□□□ 0.06
CHTOP-202ENST00000368687 LIPFP07098 398 aa15.43■□□□□ 0.06
CHTOP-202ENST00000368687 GLRA1P23415 457 aa15.43■□□□□ 0.06
CHTOP-202ENST00000368687 RBMXP38159 391 aaKnown RBP15.43■□□□□ 0.06
CHTOP-202ENST00000368687 HAAOP46952 286 aa15.43■□□□□ 0.06
CHTOP-202ENST00000368687 HSPA13P48723 471 aa15.43■□□□□ 0.06
CHTOP-202ENST00000368687 FUT6P51993 359 aa15.43■□□□□ 0.06
CHTOP-202ENST00000368687 SMIM21Q3B7S5 101 aa15.43■□□□□ 0.06
CHTOP-202ENST00000368687 ATPAF1Q5TC12 328 aaPredicted RBP15.43■□□□□ 0.06
CHTOP-202ENST00000368687 HAGHLQ6PII5 290 aaPredicted RBP15.43■□□□□ 0.06
CHTOP-202ENST00000368687 IL17RELQ6ZVW7 336 aa15.43■□□□□ 0.06
CHTOP-202ENST00000368687 UTS2BQ765I0 119 aa15.43■□□□□ 0.06
CHTOP-202ENST00000368687 C19orf18Q8NEA5 215 aa15.43■□□□□ 0.06
CHTOP-202ENST00000368687 DNAAF1Q8NEP3 725 aa15.43■□□□□ 0.06
CHTOP-202ENST00000368687 FBLIM1Q8WUP2 373 aa15.43■□□□□ 0.06
CHTOP-202ENST00000368687 RAB40AQ8WXH6 277 aa15.43■□□□□ 0.06
CHTOP-202ENST00000368687 AQP3Q92482 292 aa15.43■□□□□ 0.06
CHTOP-202ENST00000368687 TMEM80Q96HE8 168 aa15.43■□□□□ 0.06
CHTOP-202ENST00000368687 DMRTB1Q96MA1 342 aa15.43■□□□□ 0.06
CHTOP-202ENST00000368687 ZNF649Q9BS31 505 aa15.43■□□□□ 0.06
CHTOP-202ENST00000368687 PKIBQ9C010 78 aa15.43■□□□□ 0.06
CHTOP-202ENST00000368687 FGF23Q9GZV9 251 aaPredicted RBP15.43■□□□□ 0.06
CHTOP-202ENST00000368687 GPR173Q9NS66 373 aa15.43■□□□□ 0.06
CHTOP-202ENST00000368687 PLCXD1Q9NUJ7 323 aa15.43■□□□□ 0.06
CHTOP-202ENST00000368687 METRNQ9UJH8 293 aa15.43■□□□□ 0.06
CHTOP-202ENST00000368687 ARHGAP32A7KAX9 2087 aa15.43■□□□□ 0.06
CHTOP-202ENST00000368687 LOC105371242A0A075B767 164 aa15.42■□□□□ 0.06
CHTOP-202ENST00000368687 IGHV2-70DA0A0C4DH43 119 aa15.42■□□□□ 0.06
CHTOP-202ENST00000368687 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.42■□□□□ 0.06
CHTOP-202ENST00000368687 NOS1APO75052 506 aaPredicted RBP15.42■□□□□ 0.06
CHTOP-202ENST00000368687 ACAA1P09110 424 aaPredicted RBP15.42■□□□□ 0.06
CHTOP-202ENST00000368687 GNAO1P09471 354 aa15.42■□□□□ 0.06
CHTOP-202ENST00000368687 LIMS3P0CW19 117 aa15.42■□□□□ 0.06
CHTOP-202ENST00000368687 LIMS4P0CW20 117 aa15.42■□□□□ 0.06
CHTOP-202ENST00000368687 EGR1P18146 543 aa15.42■□□□□ 0.06
CHTOP-202ENST00000368687 PRKACBP22694 351 aa15.42■□□□□ 0.06
CHTOP-202ENST00000368687 MPZP25189 248 aa15.42■□□□□ 0.06
CHTOP-202ENST00000368687 NANOS3P60323 173 aaKnown RBP15.42■□□□□ 0.06
CHTOP-202ENST00000368687 STUMQ69YW2 141 aa15.42■□□□□ 0.06
CHTOP-202ENST00000368687 LYPD2Q6UXB3 125 aa15.42■□□□□ 0.06
CHTOP-202ENST00000368687 ZNF841Q6ZN19 808 aa15.42■□□□□ 0.06
CHTOP-202ENST00000368687 OR13C3Q8NGS6 347 aa15.42■□□□□ 0.06
CHTOP-202ENST00000368687 OR52N1Q8NH53 320 aa15.42■□□□□ 0.06
CHTOP-202ENST00000368687 OR5AK2Q8NH90 309 aa15.42■□□□□ 0.06
CHTOP-202ENST00000368687 SPSB1Q96BD6 273 aa15.42■□□□□ 0.06
CHTOP-202ENST00000368687 TMIGD2Q96BF3 282 aa15.42■□□□□ 0.06
CHTOP-202ENST00000368687 MED30Q96HR3 178 aa15.42■□□□□ 0.06
CHTOP-202ENST00000368687 ISG20L2Q9H9L3 353 aaKnown RBP15.42■□□□□ 0.06
CHTOP-202ENST00000368687 AUP1Q9Y679 476 aa15.42■□□□□ 0.06
CHTOP-202ENST00000368687 TRAPPC2LH3BP13 241 aa15.41■□□□□ 0.06
CHTOP-202ENST00000368687 AKR7A2O43488 359 aa15.41■□□□□ 0.06
CHTOP-202ENST00000368687 OCM2P0CE71 109 aa15.41■□□□□ 0.06
CHTOP-202ENST00000368687 OCMP0CE72 109 aaPredicted RBP15.41■□□□□ 0.06
CHTOP-202ENST00000368687 IL24Q13007 206 aa15.41■□□□□ 0.06
CHTOP-202ENST00000368687 RIPK1Q13546 671 aa15.41■□□□□ 0.06
CHTOP-202ENST00000368687 LRRC10Q5BKY1 277 aa15.41■□□□□ 0.06
CHTOP-202ENST00000368687 RPL22L1Q6P5R6 122 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms