RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 U3KQ87 197 aa14.5□□□□□ -0.09
SAMM50-201ENST00000350028 ZNF816-ZNF321PA0A0X1KG74 233 aa14.49□□□□□ -0.09
SAMM50-201ENST00000350028 CSTBP04080 98 aaKnown RBP14.49□□□□□ -0.09
SAMM50-201ENST00000350028 EDN3P14138 238 aa14.49□□□□□ -0.09
SAMM50-201ENST00000350028 ZBTB25P24278 435 aa14.49□□□□□ -0.09
SAMM50-201ENST00000350028 ARR3P36575 388 aa14.49□□□□□ -0.09
SAMM50-201ENST00000350028 ATP1B3P54709 279 aa14.49□□□□□ -0.09
SAMM50-201ENST00000350028 DHRS2Q13268 280 aa14.49□□□□□ -0.09
SAMM50-201ENST00000350028 LYG2Q86SG7 212 aa14.49□□□□□ -0.09
SAMM50-201ENST00000350028 OR5H2Q8NGV7 314 aa14.49□□□□□ -0.09
SAMM50-201ENST00000350028 TERB2Q8NHR7 220 aa14.49□□□□□ -0.09
SAMM50-201ENST00000350028 FBXW5Q969U6 566 aa14.49□□□□□ -0.09
SAMM50-201ENST00000350028 WDYHV1Q96HA8 205 aa14.49□□□□□ -0.09
SAMM50-201ENST00000350028 Q96M66 194 aa14.49□□□□□ -0.09
SAMM50-201ENST00000350028 KCNN3Q9UGI6 736 aa14.49□□□□□ -0.09
SAMM50-201ENST00000350028 HMSDA8MTL9 139 aa14.49□□□□□ -0.09
SAMM50-201ENST00000350028 IL2RAP01589 272 aa14.49□□□□□ -0.09
SAMM50-201ENST00000350028 AMY2BP19961 511 aa14.49□□□□□ -0.09
SAMM50-201ENST00000350028 NFYAP23511 347 aaPredicted RBP14.49□□□□□ -0.09
SAMM50-201ENST00000350028 CD34P28906 385 aa14.49□□□□□ -0.09
SAMM50-201ENST00000350028 TAS2R31P59538 309 aa14.49□□□□□ -0.09
SAMM50-201ENST00000350028 RSU1Q15404 277 aa14.49□□□□□ -0.09
SAMM50-201ENST00000350028 C3AR1Q16581 482 aa14.49□□□□□ -0.09
SAMM50-201ENST00000350028 C9orf135Q5VTT2 229 aa14.49□□□□□ -0.09
SAMM50-201ENST00000350028 LPCAT3Q6P1A2 487 aa14.49□□□□□ -0.09
SAMM50-201ENST00000350028 IGF2-ASQ6U949 168 aa14.49□□□□□ -0.09
SAMM50-201ENST00000350028 MOB3CQ70IA8 216 aa14.49□□□□□ -0.09
SAMM50-201ENST00000350028 NUFIP2Q7Z417 695 aaKnown RBP14.49□□□□□ -0.09
SAMM50-201ENST00000350028 ZNF680Q8NEM1 530 aa14.49□□□□□ -0.09
SAMM50-201ENST00000350028 WDR89Q96FK6 387 aaPredicted RBP14.49□□□□□ -0.09
SAMM50-201ENST00000350028 ZDHHC11Q9H8X9 412 aa14.49□□□□□ -0.09
SAMM50-201ENST00000350028 GP6Q9HCN6 339 aa14.49□□□□□ -0.09
SAMM50-201ENST00000350028 PTPRZ1P23471 2315 aaPredicted RBP14.49□□□□□ -0.09
SAMM50-201ENST00000350028 IGKV1-27A0A075B6S5 117 aa14.48□□□□□ -0.09
SAMM50-201ENST00000350028 A0A096LPE4 126 aa14.48□□□□□ -0.09
SAMM50-201ENST00000350028 A0A1W2PPZ6 126 aa14.48□□□□□ -0.09
SAMM50-201ENST00000350028 OR2AT4A6NND4 320 aa14.48□□□□□ -0.09
SAMM50-201ENST00000350028 L7N2F9 121 aa14.48□□□□□ -0.09
SAMM50-201ENST00000350028 TM4SF5O14894 197 aa14.48□□□□□ -0.09
SAMM50-201ENST00000350028 HTR3BO95264 441 aa14.48□□□□□ -0.09
SAMM50-201ENST00000350028 SSTR2P30874 369 aa14.48□□□□□ -0.09
SAMM50-201ENST00000350028 TNFSF10P50591 281 aa14.48□□□□□ -0.09
SAMM50-201ENST00000350028 TAS2R46P59540 309 aa14.48□□□□□ -0.09
SAMM50-201ENST00000350028 GMFBP60983 142 aa14.48□□□□□ -0.09
SAMM50-201ENST00000350028 DPPA2Q7Z7J5 298 aa14.48□□□□□ -0.09
SAMM50-201ENST00000350028 VASH2Q86V25 355 aa14.48□□□□□ -0.09
SAMM50-201ENST00000350028 TMEM17Q86X19 198 aa14.48□□□□□ -0.09
SAMM50-201ENST00000350028 PXT1Q8NFP0 134 aa14.48□□□□□ -0.09
SAMM50-201ENST00000350028 SCGB3A2Q96PL1 93 aa14.48□□□□□ -0.09
SAMM50-201ENST00000350028 DPCDQ9BVM2 203 aaPredicted RBP14.48□□□□□ -0.09
SAMM50-201ENST00000350028 TMEM165Q9HC07 324 aa14.48□□□□□ -0.09
SAMM50-201ENST00000350028 PCDHB16Q9NRJ7 776 aa14.48□□□□□ -0.09
SAMM50-201ENST00000350028 CNOT1A5YKK6 2376 aaKnown RBP14.48□□□□□ -0.09
SAMM50-201ENST00000350028 LOC100509620A0A075B734 347 aa14.47□□□□□ -0.09
SAMM50-201ENST00000350028 CEACAM18A8MTB9 384 aa14.47□□□□□ -0.09
SAMM50-201ENST00000350028 MCRIP1C9JLW8 97 aa14.47□□□□□ -0.09
SAMM50-201ENST00000350028 NKX2-8O15522 239 aa14.47□□□□□ -0.09
SAMM50-201ENST00000350028 HLA-AP01891 365 aaKnown RBP14.47□□□□□ -0.09
SAMM50-201ENST00000350028 HLA-HP01893 362 aa14.47□□□□□ -0.09
SAMM50-201ENST00000350028 HLA-GP17693 338 aa14.47□□□□□ -0.09
SAMM50-201ENST00000350028 OR3A3P47888 321 aa14.47□□□□□ -0.09
SAMM50-201ENST00000350028 OR3A2P47893 321 aa14.47□□□□□ -0.09
SAMM50-201ENST00000350028 FOXG1P55316 489 aaPredicted RBP14.47□□□□□ -0.09
SAMM50-201ENST00000350028 SRSF4Q08170 494 aaKnown RBP14.47□□□□□ -0.09
SAMM50-201ENST00000350028 OPCMLQ14982 345 aa14.47□□□□□ -0.09
SAMM50-201ENST00000350028 GRK1Q15835 563 aa14.47□□□□□ -0.09
SAMM50-201ENST00000350028 DCAF12L2Q5VW00 463 aa14.47□□□□□ -0.09
SAMM50-201ENST00000350028 LIN54Q6MZP7 749 aa14.47□□□□□ -0.09
SAMM50-201ENST00000350028 C17orf107Q6ZR85 190 aa14.47□□□□□ -0.09
SAMM50-201ENST00000350028 PIGCQ92535 297 aa14.47□□□□□ -0.09
SAMM50-201ENST00000350028 ST6GALNAC5Q9BVH7 336 aa14.47□□□□□ -0.09
SAMM50-201ENST00000350028 IL36GQ9NZH8 169 aa14.47□□□□□ -0.09
SAMM50-201ENST00000350028 SPRR3Q9UBC9 169 aa14.47□□□□□ -0.09
SAMM50-201ENST00000350028 HSF4Q9ULV5 492 aa14.47□□□□□ -0.09
SAMM50-201ENST00000350028 NOP16Q9Y3C1 178 aaKnown RBP14.47□□□□□ -0.09
SAMM50-201ENST00000350028 ZNF175Q9Y473 711 aa14.47□□□□□ -0.09
SAMM50-201ENST00000350028 RTTNQ86VV8 2226 aa14.47□□□□□ -0.09
SAMM50-201ENST00000350028 MYO7BQ6PIF6 2116 aa14.47□□□□□ -0.09
SAMM50-201ENST00000350028 C9orf170A2RU37 121 aa14.46□□□□□ -0.09
SAMM50-201ENST00000350028 EFSO43281 561 aa14.46□□□□□ -0.09
SAMM50-201ENST00000350028 IFNA7P01567 189 aa14.46□□□□□ -0.09
SAMM50-201ENST00000350028 SERPINA5P05154 406 aa14.46□□□□□ -0.09
SAMM50-201ENST00000350028 CXCL2P19875 107 aa14.46□□□□□ -0.09
SAMM50-201ENST00000350028 SNU13P55769 128 aaKnown RBP14.46□□□□□ -0.09
SAMM50-201ENST00000350028 SEC61A1P61619 476 aaKnown RBP14.46□□□□□ -0.09
SAMM50-201ENST00000350028 PLP2Q04941 152 aa14.46□□□□□ -0.09
SAMM50-201ENST00000350028 IKZF1Q13422 519 aa14.46□□□□□ -0.09
SAMM50-201ENST00000350028 PPP1R1AQ13522 171 aa14.46□□□□□ -0.09
SAMM50-201ENST00000350028 CAMK2BQ13554 666 aa14.46□□□□□ -0.09
SAMM50-201ENST00000350028 RNFT1Q5M7Z0 435 aa14.46□□□□□ -0.09
SAMM50-201ENST00000350028 PLCXD3Q63HM9 321 aa14.46□□□□□ -0.09
SAMM50-201ENST00000350028 CSNK2A3Q8NEV1 391 aa14.46□□□□□ -0.09
SAMM50-201ENST00000350028 OR5M8Q8NGP6 311 aa14.46□□□□□ -0.09
SAMM50-201ENST00000350028 MITD1Q8WV92 249 aa14.46□□□□□ -0.09
SAMM50-201ENST00000350028 APOBEC3DQ96AK3 386 aaPredicted RBP14.46□□□□□ -0.09
SAMM50-201ENST00000350028 MRPS24Q96EL2 167 aaKnown RBP14.46□□□□□ -0.09
SAMM50-201ENST00000350028 ELMOD3Q96FG2 381 aa14.46□□□□□ -0.09
SAMM50-201ENST00000350028 PLEKHJ1Q9NW61 149 aa14.46□□□□□ -0.09
SAMM50-201ENST00000350028 SLC22A20A6NK97 555 aa14.46□□□□□ -0.1
SAMM50-201ENST00000350028 M0R233 179 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 235.3 ms