RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 ADAMTS9Q9P2N4 1935 aa17.4■□□□□ 0.38
CRLF3-201ENST00000324238 F2RL1P55085 397 aa17.4■□□□□ 0.38
CRLF3-201ENST00000324238 GPR85P60893 370 aa17.4■□□□□ 0.38
CRLF3-201ENST00000324238 DHRS7BQ6IAN0 325 aaPredicted RBP17.4■□□□□ 0.38
CRLF3-201ENST00000324238 Q6ZRG5 221 aa17.4■□□□□ 0.38
CRLF3-201ENST00000324238 MISPQ8IVT2 679 aa17.4■□□□□ 0.38
CRLF3-201ENST00000324238 TDHQ8IZJ6 230 aa17.4■□□□□ 0.38
CRLF3-201ENST00000324238 ADAMTS17Q8TE56 1095 aa17.4■□□□□ 0.38
CRLF3-201ENST00000324238 PLEKHJ1Q9NW61 149 aa17.4■□□□□ 0.38
CRLF3-201ENST00000324238 MYOTQ9UBF9 498 aa17.4■□□□□ 0.38
CRLF3-201ENST00000324238 WIF1Q9Y5W5 379 aa17.4■□□□□ 0.38
CRLF3-201ENST00000324238 TMEM225BP0DP42 221 aa17.4■□□□□ 0.38
CRLF3-201ENST00000324238 RPL12P30050 165 aaKnown RBP17.4■□□□□ 0.38
CRLF3-201ENST00000324238 FCGR2CP31995 323 aa17.4■□□□□ 0.38
CRLF3-201ENST00000324238 DHRS11Q6UWP2 260 aa17.4■□□□□ 0.38
CRLF3-201ENST00000324238 LHFPL1Q86WI0 220 aa17.4■□□□□ 0.38
CRLF3-201ENST00000324238 CLCC1Q96S66 551 aa17.4■□□□□ 0.38
CRLF3-201ENST00000324238 OCIAD1Q9NX40 245 aa17.4■□□□□ 0.38
CRLF3-201ENST00000324238 AMDHD2Q9Y303 409 aa17.4■□□□□ 0.38
CRLF3-201ENST00000324238 FAM230AA0A1W2PPH8 454 aa17.39■□□□□ 0.37
CRLF3-201ENST00000324238 SLC33A1O00400 549 aaPredicted RBP17.39■□□□□ 0.37
CRLF3-201ENST00000324238 MSTNO14793 375 aa17.39■□□□□ 0.37
CRLF3-201ENST00000324238 RBMXP38159 391 aaKnown RBP17.39■□□□□ 0.37
CRLF3-201ENST00000324238 RFC3P40938 356 aa17.39■□□□□ 0.37
CRLF3-201ENST00000324238 Q7L0L9 218 aa17.39■□□□□ 0.37
CRLF3-201ENST00000324238 WDSUB1Q8N9V3 476 aa17.39■□□□□ 0.37
CRLF3-201ENST00000324238 SULT4A1Q9BR01 284 aa17.39■□□□□ 0.37
CRLF3-201ENST00000324238 RAB33BQ9H082 229 aa17.39■□□□□ 0.37
CRLF3-201ENST00000324238 KNTC1P50748 2209 aa17.39■□□□□ 0.37
CRLF3-201ENST00000324238 TMEM33P57088 247 aa17.39■□□□□ 0.37
CRLF3-201ENST00000324238 PHLDA2Q53GA4 152 aa17.39■□□□□ 0.37
CRLF3-201ENST00000324238 RHBDD2Q6NTF9 364 aa17.39■□□□□ 0.37
CRLF3-201ENST00000324238 CADM4Q8NFZ8 388 aa17.39■□□□□ 0.37
CRLF3-201ENST00000324238 UBE2ZQ9H832 354 aaPredicted RBP17.39■□□□□ 0.37
CRLF3-201ENST00000324238 ZFP57Q9NU63 452 aa17.39■□□□□ 0.37
CRLF3-201ENST00000324238 NXT1Q9UKK6 140 aaKnown RBP17.39■□□□□ 0.37
CRLF3-201ENST00000324238 CARHSP1Q9Y2V2 147 aaKnown RBP17.39■□□□□ 0.37
CRLF3-201ENST00000324238 K7EPK0 472 aa17.38■□□□□ 0.37
CRLF3-201ENST00000324238 SNRPEP62304 92 aaKnown RBP17.38■□□□□ 0.37
CRLF3-201ENST00000324238 SNAI3Q3KNW1 292 aa17.38■□□□□ 0.37
CRLF3-201ENST00000324238 DOK3Q7L591 496 aa17.38■□□□□ 0.37
CRLF3-201ENST00000324238 FAM71E2Q8N5Q1 922 aa17.38■□□□□ 0.37
CRLF3-201ENST00000324238 C14orf79Q96F83 325 aa17.38■□□□□ 0.37
CRLF3-201ENST00000324238 NECAB3Q96P71 396 aaPredicted RBP17.38■□□□□ 0.37
CRLF3-201ENST00000324238 AQP10Q96PS8 301 aa17.38■□□□□ 0.37
CRLF3-201ENST00000324238 C14orf166Q9Y224 244 aaKnown RBP17.38■□□□□ 0.37
CRLF3-201ENST00000324238 CAV2P51636 162 aa17.38■□□□□ 0.37
CRLF3-201ENST00000324238 NAAAQ02083 359 aa17.38■□□□□ 0.37
CRLF3-201ENST00000324238 ZNF616Q08AN1 781 aa17.38■□□□□ 0.37
CRLF3-201ENST00000324238 PEA15Q15121 130 aa17.38■□□□□ 0.37
CRLF3-201ENST00000324238 SHBQ15464 509 aa17.38■□□□□ 0.37
CRLF3-201ENST00000324238 RSPO1Q2MKA7 263 aaPredicted RBP17.38■□□□□ 0.37
CRLF3-201ENST00000324238 FAM76BQ5HYJ3 339 aa17.38■□□□□ 0.37
CRLF3-201ENST00000324238 PEG10Q86TG7 708 aaKnown RBP17.38■□□□□ 0.37
CRLF3-201ENST00000324238 MRGPRX4Q96LA9 322 aa17.38■□□□□ 0.37
CRLF3-201ENST00000324238 DEFB126Q9BYW3 111 aa17.38■□□□□ 0.37
CRLF3-201ENST00000324238 SCGNO76038 276 aa17.37■□□□□ 0.37
CRLF3-201ENST00000324238 F10P00742 488 aa17.37■□□□□ 0.37
CRLF3-201ENST00000324238 H2AFB1P0C5Y9 115 aa17.37■□□□□ 0.37
CRLF3-201ENST00000324238 GLYATL2Q8WU03 294 aa17.37■□□□□ 0.37
CRLF3-201ENST00000324238 USB1Q9BQ65 265 aaKnown RBP17.37■□□□□ 0.37
CRLF3-201ENST00000324238 SEC11CQ9BY50 192 aa17.37■□□□□ 0.37
CRLF3-201ENST00000324238 CHRNA10Q9GZZ6 450 aa17.37■□□□□ 0.37
CRLF3-201ENST00000324238 B3GALT1Q9Y5Z6 326 aa17.37■□□□□ 0.37
CRLF3-201ENST00000324238 MTRF1O75570 445 aaKnown RBP17.37■□□□□ 0.37
CRLF3-201ENST00000324238 SPINK2P20155 84 aa17.37■□□□□ 0.37
CRLF3-201ENST00000324238 DCDP81605 110 aaKnown RBP17.37■□□□□ 0.37
CRLF3-201ENST00000324238 GGNBP1Q5YKI7 109 aa17.37■□□□□ 0.37
CRLF3-201ENST00000324238 SULF2Q8IWU5 870 aa17.37■□□□□ 0.37
CRLF3-201ENST00000324238 OR2M3Q8NG83 312 aa17.37■□□□□ 0.37
CRLF3-201ENST00000324238 GPHA2Q96T91 129 aa17.37■□□□□ 0.37
CRLF3-201ENST00000324238 FBLN5Q9UBX5 448 aa17.37■□□□□ 0.37
CRLF3-201ENST00000324238 ZNF407Q9C0G0 2248 aa17.37■□□□□ 0.37
CRLF3-201ENST00000324238 A0A1W2PNV4 684 aa17.37■□□□□ 0.37
CRLF3-201ENST00000324238 IFNA2P01563 188 aa17.37■□□□□ 0.37
CRLF3-201ENST00000324238 SNRNP70P08621 437 aaKnown RBP17.37■□□□□ 0.37
CRLF3-201ENST00000324238 GSK3AP49840 483 aa17.37■□□□□ 0.37
CRLF3-201ENST00000324238 RBMS3Q6XE24 437 aaKnown RBP17.37■□□□□ 0.37
CRLF3-201ENST00000324238 SHDQ96IW2 340 aa17.37■□□□□ 0.37
CRLF3-201ENST00000324238 RPS10P5Q9NQ39 176 aa17.37■□□□□ 0.37
CRLF3-201ENST00000324238 PLEK2Q9NYT0 353 aa17.37■□□□□ 0.37
CRLF3-201ENST00000324238 RARRES3Q9UL19 164 aa17.37■□□□□ 0.37
CRLF3-201ENST00000324238 ADH6P28332 368 aa17.36■□□□□ 0.37
CRLF3-201ENST00000324238 PNLIPRP3Q17RR3 467 aa17.36■□□□□ 0.37
CRLF3-201ENST00000324238 AVPI1Q5T686 147 aa17.36■□□□□ 0.37
CRLF3-201ENST00000324238 CPEB2Q7Z5Q1 589 aaKnown RBP17.36■□□□□ 0.37
CRLF3-201ENST00000324238 RASL10BQ96S79 203 aa17.36■□□□□ 0.37
CRLF3-201ENST00000324238 CNTNAP3Q9BZ76 1288 aa17.36■□□□□ 0.37
CRLF3-201ENST00000324238 ZNF850A8MQ14 1090 aa17.36■□□□□ 0.37
CRLF3-201ENST00000324238 GUCA1AP43080 201 aaPredicted RBP17.36■□□□□ 0.37
CRLF3-201ENST00000324238 IL15RAQ13261 267 aa17.36■□□□□ 0.37
CRLF3-201ENST00000324238 C10orf91Q5T1B1 145 aa17.36■□□□□ 0.37
CRLF3-201ENST00000324238 OR6X1Q8NH79 312 aa17.36■□□□□ 0.37
CRLF3-201ENST00000324238 FNDC9Q8TBE3 224 aa17.36■□□□□ 0.37
CRLF3-201ENST00000324238 OXGR1Q96P68 337 aa17.36■□□□□ 0.37
CRLF3-201ENST00000324238 IP6K3Q96PC2 410 aa17.36■□□□□ 0.37
CRLF3-201ENST00000324238 PIGQQ9BRB3 760 aa17.36■□□□□ 0.37
CRLF3-201ENST00000324238 RCL1Q9Y2P8 373 aaKnown RBP17.36■□□□□ 0.37
CRLF3-201ENST00000324238 CPT2P23786 658 aa17.35■□□□□ 0.37
CRLF3-201ENST00000324238 ACKR3P25106 362 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms