RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 TPRP12270 2363 aaKnown RBP15.84■□□□□ 0.13
USP39-201ENST00000323701 NBASA2RRP1 2371 aa15.84■□□□□ 0.13
USP39-201ENST00000323701 A0A0A6YYH2 397 aa15.83■□□□□ 0.13
USP39-201ENST00000323701 HMX3A6NHT5 357 aa15.83■□□□□ 0.13
USP39-201ENST00000323701 A6NJ64 397 aa15.83■□□□□ 0.13
USP39-201ENST00000323701 CD300LBA8K4G0 201 aa15.83■□□□□ 0.13
USP39-201ENST00000323701 SMPD2O60906 423 aa15.83■□□□□ 0.13
USP39-201ENST00000323701 PRDX4Q13162 271 aa15.83■□□□□ 0.13
USP39-201ENST00000323701 TATDN3Q17R31 274 aa15.83■□□□□ 0.13
USP39-201ENST00000323701 OR2T2Q6IF00 324 aa15.83■□□□□ 0.13
USP39-201ENST00000323701 C1orf162Q8NEQ5 155 aaPredicted RBP15.83■□□□□ 0.13
USP39-201ENST00000323701 CADP27708 2225 aa15.83■□□□□ 0.12
USP39-201ENST00000323701 TCRBP04435 133 aa15.83■□□□□ 0.12
USP39-201ENST00000323701 CRHP06850 196 aa15.83■□□□□ 0.12
USP39-201ENST00000323701 CBR1P16152 277 aa15.83■□□□□ 0.12
USP39-201ENST00000323701 PRKACBP22694 351 aa15.83■□□□□ 0.12
USP39-201ENST00000323701 RPS27AP62979 156 aaKnown RBP15.83■□□□□ 0.12
USP39-201ENST00000323701 BHLHA15Q7RTS1 189 aaPredicted RBP15.83■□□□□ 0.12
USP39-201ENST00000323701 CCDC36Q8IYA8 594 aa15.83■□□□□ 0.12
USP39-201ENST00000323701 BATF2Q8N1L9 274 aa15.83■□□□□ 0.12
USP39-201ENST00000323701 CENPXA8MT69 81 aa15.82■□□□□ 0.12
USP39-201ENST00000323701 CD3DP04234 171 aa15.82■□□□□ 0.12
USP39-201ENST00000323701 LPLP06858 475 aa15.82■□□□□ 0.12
USP39-201ENST00000323701 UBBP0CG47 229 aa15.82■□□□□ 0.12
USP39-201ENST00000323701 P2RY6Q15077 328 aa15.82■□□□□ 0.12
USP39-201ENST00000323701 ALKBH6Q3KRA9 238 aa15.82■□□□□ 0.12
USP39-201ENST00000323701 RAB12Q6IQ22 244 aa15.82■□□□□ 0.12
USP39-201ENST00000323701 BEND4Q6ZU67 534 aa15.82■□□□□ 0.12
USP39-201ENST00000323701 C22orf34Q6ZV56 151 aa15.82■□□□□ 0.12
USP39-201ENST00000323701 GVQW1Q8N7I0 195 aa15.82■□□□□ 0.12
USP39-201ENST00000323701 OR8S1Q8NH09 359 aa15.82■□□□□ 0.12
USP39-201ENST00000323701 OR2J1Q9GZK6 312 aa15.82■□□□□ 0.12
USP39-201ENST00000323701 A0A0G2JNJ9 132 aa15.82■□□□□ 0.12
USP39-201ENST00000323701 FOXI3A8MTJ6 420 aaPredicted RBP15.82■□□□□ 0.12
USP39-201ENST00000323701 SSX5O60225 188 aa15.82■□□□□ 0.12
USP39-201ENST00000323701 ECDO95905 644 aaPredicted RBP15.82■□□□□ 0.12
USP39-201ENST00000323701 CECR9P0C854 216 aa15.82■□□□□ 0.12
USP39-201ENST00000323701 BMP5P22003 454 aa15.82■□□□□ 0.12
USP39-201ENST00000323701 FUT6P51993 359 aa15.82■□□□□ 0.12
USP39-201ENST00000323701 ZBTB37Q5TC79 503 aa15.82■□□□□ 0.12
USP39-201ENST00000323701 LHFPL2Q6ZUX7 228 aa15.82■□□□□ 0.12
USP39-201ENST00000323701 FJX1Q86VR8 437 aa15.82■□□□□ 0.12
USP39-201ENST00000323701 FAM89BQ8N5H3 189 aa15.82■□□□□ 0.12
USP39-201ENST00000323701 OR4C16Q8NGL9 310 aa15.82■□□□□ 0.12
USP39-201ENST00000323701 ARHGAP5-AS1Q96IT6 56 aa15.82■□□□□ 0.12
USP39-201ENST00000323701 BEX2Q9BXY8 128 aa15.82■□□□□ 0.12
USP39-201ENST00000323701 DPAGT1Q9H3H5 408 aa15.82■□□□□ 0.12
USP39-201ENST00000323701 MCUBQ9NWR8 336 aa15.82■□□□□ 0.12
USP39-201ENST00000323701 Q9UFV3 132 aa15.82■□□□□ 0.12
USP39-201ENST00000323701 FLVCR2Q9UPI3 526 aa15.82■□□□□ 0.12
USP39-201ENST00000323701 ALG5Q9Y673 324 aa15.82■□□□□ 0.12
USP39-201ENST00000323701 INMT-MINDY4F8WBC2 141 aa15.81■□□□□ 0.12
USP39-201ENST00000323701 SFTPBP07988 381 aa15.81■□□□□ 0.12
USP39-201ENST00000323701 GPM6AP51674 278 aa15.81■□□□□ 0.12
USP39-201ENST00000323701 OR4S1Q8NGB4 309 aa15.81■□□□□ 0.12
USP39-201ENST00000323701 OR51T1Q8NGJ9 327 aa15.81■□□□□ 0.12
USP39-201ENST00000323701 CREB3L1Q96BA8 519 aa15.81■□□□□ 0.12
USP39-201ENST00000323701 FYTTD1Q96QD9 318 aaKnown RBP15.81■□□□□ 0.12
USP39-201ENST00000323701 CST11Q9H112 138 aa15.81■□□□□ 0.12
USP39-201ENST00000323701 RANGRFQ9HD47 186 aaPredicted RBP15.81■□□□□ 0.12
USP39-201ENST00000323701 ZNF835Q9Y2P0 537 aa15.81■□□□□ 0.12
USP39-201ENST00000323701 OR5H1A6NKK0 313 aa15.8■□□□□ 0.12
USP39-201ENST00000323701 C3orf80F5H4A9 247 aa15.8■□□□□ 0.12
USP39-201ENST00000323701 PRRG2O14669 202 aa15.8■□□□□ 0.12
USP39-201ENST00000323701 CST4P01036 141 aa15.8■□□□□ 0.12
USP39-201ENST00000323701 MELTFP08582 738 aa15.8■□□□□ 0.12
USP39-201ENST00000323701 HOXB1P14653 301 aaPredicted RBP15.8■□□□□ 0.12
USP39-201ENST00000323701 HOXC12P31275 282 aa15.8■□□□□ 0.12
USP39-201ENST00000323701 PDZK1IP1Q13113 114 aa15.8■□□□□ 0.12
USP39-201ENST00000323701 ZFP69Q49AA0 526 aa15.8■□□□□ 0.12
USP39-201ENST00000323701 S100PBPQ96BU1 408 aa15.8■□□□□ 0.12
USP39-201ENST00000323701 C7orf50Q9BRJ6 194 aaKnown RBP15.8■□□□□ 0.12
USP39-201ENST00000323701 CDH20Q9HBT6 801 aa15.8■□□□□ 0.12
USP39-201ENST00000323701 GHRLQ9UBU3 117 aa15.8■□□□□ 0.12
USP39-201ENST00000323701 SLC7A11Q9UPY5 501 aa15.8■□□□□ 0.12
USP39-201ENST00000323701 ESPL1Q14674 2120 aa15.8■□□□□ 0.12
USP39-201ENST00000323701 PQLC2LA1A4F0 135 aa15.8■□□□□ 0.12
USP39-201ENST00000323701 ICMTO60725 284 aa15.8■□□□□ 0.12
USP39-201ENST00000323701 TRAPPC2P0DI81 140 aa15.8■□□□□ 0.12
USP39-201ENST00000323701 TRAPPC2BP0DI82 140 aa15.8■□□□□ 0.12
USP39-201ENST00000323701 ZNF35P13682 527 aa15.8■□□□□ 0.12
USP39-201ENST00000323701 GTF2F2P13984 249 aa15.8■□□□□ 0.12
USP39-201ENST00000323701 UCP2P55851 309 aa15.8■□□□□ 0.12
USP39-201ENST00000323701 AP3S2P59780 193 aa15.8■□□□□ 0.12
USP39-201ENST00000323701 PPP1CBP62140 327 aa15.8■□□□□ 0.12
USP39-201ENST00000323701 ALKBH2Q6NS38 261 aa15.8■□□□□ 0.12
USP39-201ENST00000323701 ASCL4Q6XD76 172 aa15.8■□□□□ 0.12
USP39-201ENST00000323701 RAB3CQ96E17 227 aa15.8■□□□□ 0.12
USP39-201ENST00000323701 RADILQ96JH8 1075 aa15.8■□□□□ 0.12
USP39-201ENST00000323701 S100A13Q99584 98 aa15.8■□□□□ 0.12
USP39-201ENST00000323701 SFXN3Q9BWM7 321 aa15.8■□□□□ 0.12
USP39-201ENST00000323701 NKIRAS2Q9NYR9 191 aa15.8■□□□□ 0.12
USP39-201ENST00000323701 BOLA1Q9Y3E2 137 aa15.8■□□□□ 0.12
USP39-201ENST00000323701 SLC25A15Q9Y619 301 aa15.8■□□□□ 0.12
USP39-201ENST00000323701 PKD1L2Q7Z442 2459 aa15.8■□□□□ 0.12
USP39-201ENST00000323701 POLEQ07864 2286 aa15.79■□□□□ 0.12
USP39-201ENST00000323701 IGHV1-18A0A0C4DH31 117 aa15.79■□□□□ 0.12
USP39-201ENST00000323701 ANKRD34BA5PLL1 514 aa15.79■□□□□ 0.12
USP39-201ENST00000323701 HTR3BO95264 441 aa15.79■□□□□ 0.12
USP39-201ENST00000323701 IGLV1-44P01699 117 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms