RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 PQLC2LA1A4F0 135 aa16.12■□□□□ 0.17
PDLIM3-202ENST00000284770 APOBEC3AP31941 199 aaPredicted RBP16.12■□□□□ 0.17
PDLIM3-202ENST00000284770 SERPINF1P36955 418 aa16.12■□□□□ 0.17
PDLIM3-202ENST00000284770 ATP1B3P54709 279 aa16.12■□□□□ 0.17
PDLIM3-202ENST00000284770 IFITM3Q01628 133 aa16.12■□□□□ 0.17
PDLIM3-202ENST00000284770 ZNF672Q499Z4 452 aaPredicted RBP16.12■□□□□ 0.17
PDLIM3-202ENST00000284770 C16orf87Q6PH81 154 aa16.12■□□□□ 0.17
PDLIM3-202ENST00000284770 SNX29P2Q8IUI4 249 aa16.12■□□□□ 0.17
PDLIM3-202ENST00000284770 PNLDC1Q8NA58 520 aaKnown RBP16.12■□□□□ 0.17
PDLIM3-202ENST00000284770 OR4M1Q8NGD0 313 aa16.12■□□□□ 0.17
PDLIM3-202ENST00000284770 OR8S1Q8NH09 359 aa16.12■□□□□ 0.17
PDLIM3-202ENST00000284770 RNF170Q96K19 258 aa16.12■□□□□ 0.17
PDLIM3-202ENST00000284770 SPOCK3Q9BQ16 436 aa16.12■□□□□ 0.17
PDLIM3-202ENST00000284770 ADAT1Q9BUB4 502 aaKnown RBP16.12■□□□□ 0.17
PDLIM3-202ENST00000284770 FGF23Q9GZV9 251 aaPredicted RBP16.12■□□□□ 0.17
PDLIM3-202ENST00000284770 MSL2Q9HCI7 577 aa16.12■□□□□ 0.17
PDLIM3-202ENST00000284770 NOP16Q9Y3C1 178 aaKnown RBP16.12■□□□□ 0.17
PDLIM3-202ENST00000284770 PLSCR5A0PG75 271 aa16.11■□□□□ 0.17
PDLIM3-202ENST00000284770 OR5B21A6NL26 309 aa16.11■□□□□ 0.17
PDLIM3-202ENST00000284770 PTBP1P26599 531 aaKnown RBP eCLIP16.11■□□□□ 0.17
PDLIM3-202ENST00000284770 POU3F4P49335 361 aa16.11■□□□□ 0.17
PDLIM3-202ENST00000284770 GPM6AP51674 278 aa16.11■□□□□ 0.17
PDLIM3-202ENST00000284770 PLA2G7Q13093 441 aa16.11■□□□□ 0.17
PDLIM3-202ENST00000284770 OR8G1Q15617 311 aa16.11■□□□□ 0.17
PDLIM3-202ENST00000284770 C2orf76Q3KRA6 126 aa16.11■□□□□ 0.17
PDLIM3-202ENST00000284770 CMTM4Q8IZR5 234 aa16.11■□□□□ 0.17
PDLIM3-202ENST00000284770 MICU1Q9BPX6 476 aa16.11■□□□□ 0.17
PDLIM3-202ENST00000284770 ABCG5Q9H222 651 aa16.11■□□□□ 0.17
PDLIM3-202ENST00000284770 LOC100289279A0A1B0GTE1 492 aa16.1■□□□□ 0.17
PDLIM3-202ENST00000284770 ZNF732B4DXR9 585 aa16.1■□□□□ 0.17
PDLIM3-202ENST00000284770 H0YL77 283 aa16.1■□□□□ 0.17
PDLIM3-202ENST00000284770 MLNRO43193 412 aa16.1■□□□□ 0.17
PDLIM3-202ENST00000284770 GNG3P63215 75 aa16.1■□□□□ 0.17
PDLIM3-202ENST00000284770 ANGPTL5Q86XS5 388 aa16.1■□□□□ 0.17
PDLIM3-202ENST00000284770 DHRS9Q9BPW9 319 aa16.1■□□□□ 0.17
PDLIM3-202ENST00000284770 RTL8AQ9BWD3 113 aa16.1■□□□□ 0.17
PDLIM3-202ENST00000284770 KCNK15Q9H427 330 aa16.1■□□□□ 0.17
PDLIM3-202ENST00000284770 LDLRAD4O15165 306 aa16.1■□□□□ 0.17
PDLIM3-202ENST00000284770 UPK1BO75841 260 aa16.1■□□□□ 0.17
PDLIM3-202ENST00000284770 ARSBP15848 533 aa16.1■□□□□ 0.17
PDLIM3-202ENST00000284770 PTGFRP43088 359 aa16.1■□□□□ 0.17
PDLIM3-202ENST00000284770 OR3A4PP47883 348 aa16.1■□□□□ 0.17
PDLIM3-202ENST00000284770 MADCAM1Q13477 382 aa16.1■□□□□ 0.17
PDLIM3-202ENST00000284770 NKPD1Q17RQ9 610 aa16.1■□□□□ 0.17
PDLIM3-202ENST00000284770 SPERTQ8NA61 448 aa16.1■□□□□ 0.17
PDLIM3-202ENST00000284770 OR10AD1Q8NGE0 317 aa16.1■□□□□ 0.17
PDLIM3-202ENST00000284770 RFT1Q96AA3 541 aa16.1■□□□□ 0.17
PDLIM3-202ENST00000284770 CCDC32Q9BV29 185 aa16.1■□□□□ 0.17
PDLIM3-202ENST00000284770 RHBDL2Q9NX52 303 aa16.1■□□□□ 0.17
PDLIM3-202ENST00000284770 PLCE1Q9P212 2302 aa16.1■□□□□ 0.17
PDLIM3-202ENST00000284770 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.09■□□□□ 0.17
PDLIM3-202ENST00000284770 TMEM272A0A1B0GTI8 110 aa16.09■□□□□ 0.17
PDLIM3-202ENST00000284770 ZSCAN5BA6NJL1 495 aa16.09■□□□□ 0.17
PDLIM3-202ENST00000284770 A6NNC1 897 aa16.09■□□□□ 0.17
PDLIM3-202ENST00000284770 TALDO1P37837 337 aa16.09■□□□□ 0.17
PDLIM3-202ENST00000284770 RANBP1P43487 201 aa16.09■□□□□ 0.17
PDLIM3-202ENST00000284770 ZP1P60852 638 aa16.09■□□□□ 0.17
PDLIM3-202ENST00000284770 EFNB3Q15768 340 aa16.09■□□□□ 0.17
PDLIM3-202ENST00000284770 FAM76BQ5HYJ3 339 aa16.09■□□□□ 0.17
PDLIM3-202ENST00000284770 OR5D18Q8NGL1 313 aa16.09■□□□□ 0.17
PDLIM3-202ENST00000284770 RAB40AQ8WXH6 277 aa16.09■□□□□ 0.17
PDLIM3-202ENST00000284770 MRPS28Q9Y2Q9 187 aaKnown RBP16.09■□□□□ 0.17
PDLIM3-202ENST00000284770 A0A0G2JMP0 313 aa16.08■□□□□ 0.17
PDLIM3-202ENST00000284770 A0A0X1KG70 313 aa16.08■□□□□ 0.17
PDLIM3-202ENST00000284770 GOSR1O95249 250 aa16.08■□□□□ 0.17
PDLIM3-202ENST00000284770 CLDN1O95832 211 aa16.08■□□□□ 0.17
PDLIM3-202ENST00000284770 NAT2P11245 290 aa16.08■□□□□ 0.17
PDLIM3-202ENST00000284770 EFNB2P52799 333 aa16.08■□□□□ 0.17
PDLIM3-202ENST00000284770 CAPZA1P52907 286 aa16.08■□□□□ 0.17
PDLIM3-202ENST00000284770 ART1P52961 327 aa16.08■□□□□ 0.17
PDLIM3-202ENST00000284770 IL18Q14116 193 aa16.08■□□□□ 0.17
PDLIM3-202ENST00000284770 AWAT2Q6E213 333 aa16.08■□□□□ 0.17
PDLIM3-202ENST00000284770 GDPD1Q8N9F7 314 aa16.08■□□□□ 0.17
PDLIM3-202ENST00000284770 DTX3Q8N9I9 347 aa16.08■□□□□ 0.17
PDLIM3-202ENST00000284770 OR4M2Q8NGB6 313 aa16.08■□□□□ 0.17
PDLIM3-202ENST00000284770 TNFAIP8L1Q8WVP5 186 aa16.08■□□□□ 0.17
PDLIM3-202ENST00000284770 GTF3AQ92664 365 aaKnown RBP16.08■□□□□ 0.17
PDLIM3-202ENST00000284770 C1orf147Q96MC9 270 aaPredicted RBP16.08■□□□□ 0.17
PDLIM3-202ENST00000284770 CXXC4Q9H2H0 198 aa16.08■□□□□ 0.17
PDLIM3-202ENST00000284770 NKIRAS2Q9NYR9 191 aa16.08■□□□□ 0.17
PDLIM3-202ENST00000284770 B9A039 149 aa16.08■□□□□ 0.16
PDLIM3-202ENST00000284770 ALDH3B1P43353 468 aa16.08■□□□□ 0.16
PDLIM3-202ENST00000284770 HAAOP46952 286 aa16.08■□□□□ 0.16
PDLIM3-202ENST00000284770 PITPNBP48739 271 aa16.08■□□□□ 0.16
PDLIM3-202ENST00000284770 ZNF81P51508 661 aa16.08■□□□□ 0.16
PDLIM3-202ENST00000284770 QRFPP83859 136 aa16.08■□□□□ 0.16
PDLIM3-202ENST00000284770 GLIPR1L1Q6UWM5 242 aa16.08■□□□□ 0.16
PDLIM3-202ENST00000284770 BIVMQ86UB2 503 aa16.08■□□□□ 0.16
PDLIM3-202ENST00000284770 ZNF573Q86YE8 665 aa16.08■□□□□ 0.16
PDLIM3-202ENST00000284770 CALHM1Q8IU99 346 aa16.08■□□□□ 0.16
PDLIM3-202ENST00000284770 OR2Z1Q8NG97 314 aa16.08■□□□□ 0.16
PDLIM3-202ENST00000284770 C14orf119Q9NWQ9 140 aa16.08■□□□□ 0.16
PDLIM3-202ENST00000284770 TMEM210A6NLX4 147 aa16.07■□□□□ 0.16
PDLIM3-202ENST00000284770 F5H5P2 479 aa16.07■□□□□ 0.16
PDLIM3-202ENST00000284770 BPNT1O95861 308 aa16.07■□□□□ 0.16
PDLIM3-202ENST00000284770 MZT1Q08AG7 82 aa16.07■□□□□ 0.16
PDLIM3-202ENST00000284770 PDZK1IP1Q13113 114 aa16.07■□□□□ 0.16
PDLIM3-202ENST00000284770 MAB21L1Q13394 359 aa16.07■□□□□ 0.16
PDLIM3-202ENST00000284770 BAK1Q16611 211 aa16.07■□□□□ 0.16
PDLIM3-202ENST00000284770 ZNF181Q2M3W8 571 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms