RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 SP1P08047 785 aa4.33□□□□□ -1.72
RC3H1-201ENST00000258349 FGF9P31371 208 aaPredicted RBP4.33□□□□□ -1.72
RC3H1-201ENST00000258349 PPICP45877 212 aa4.33□□□□□ -1.72
RC3H1-201ENST00000258349 TMEM267Q0VDI3 215 aaPredicted RBP4.33□□□□□ -1.72
RC3H1-201ENST00000258349 CEBPEQ15744 281 aa4.33□□□□□ -1.72
RC3H1-201ENST00000258349 SIGIRRQ6IA17 410 aa4.33□□□□□ -1.72
RC3H1-201ENST00000258349 C16orf52Q8NHV5 167 aa4.33□□□□□ -1.72
RC3H1-201ENST00000258349 SMIM14Q96QK8 99 aa4.33□□□□□ -1.72
RC3H1-201ENST00000258349 SDCBPO00560 298 aaPredicted RBP4.33□□□□□ -1.72
RC3H1-201ENST00000258349 SLC25A4P12235 298 aa4.33□□□□□ -1.72
RC3H1-201ENST00000258349 ZBTB25P24278 435 aa4.33□□□□□ -1.72
RC3H1-201ENST00000258349 IRS1P35568 1242 aa4.33□□□□□ -1.72
RC3H1-201ENST00000258349 GPR3P46089 330 aa4.33□□□□□ -1.72
RC3H1-201ENST00000258349 MEOX2P50222 304 aa4.33□□□□□ -1.72
RC3H1-201ENST00000258349 SLC25A35Q3KQZ1 300 aa4.33□□□□□ -1.72
RC3H1-201ENST00000258349 OR1F12Q8NHA8 337 aa4.33□□□□□ -1.72
RC3H1-201ENST00000258349 AKR7LQ8NHP1 331 aa4.33□□□□□ -1.72
RC3H1-201ENST00000258349 ZNF775Q96BV0 537 aaPredicted RBP4.33□□□□□ -1.72
RC3H1-201ENST00000258349 ESRP2Q9H6T0 727 aaKnown RBP4.33□□□□□ -1.72
RC3H1-201ENST00000258349 FLVCR2Q9UPI3 526 aa4.33□□□□□ -1.72
RC3H1-201ENST00000258349 SIT1Q9Y3P8 196 aa4.33□□□□□ -1.72
RC3H1-201ENST00000258349 MED13Q9UHV7 2174 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 EFSO43281 561 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 DEDDO75618 318 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 TSPAN12O95859 305 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 GP1BAP07359 652 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 OR5H8P0DN80 308 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 RAB7AP51149 207 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 DEFB103AP81534 67 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 ELOBQ15370 118 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 GUK1Q16774 197 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 XAF1Q6GPH4 301 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 RNASEKQ6P5S7 137 aaKnown RBP4.32□□□□□ -1.72
RC3H1-201ENST00000258349 OR5M1Q8NGP8 315 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 OTOSQ8NHW6 89 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 SLC37A2Q8TED4 501 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 DUSP13Q9UII6 198 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 FAM24AA6NFZ4 105 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 FIGNL2A6NMB9 653 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 ATF1P18846 271 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 OPRM1P35372 400 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 CD200P41217 278 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 PNRC1Q12796 327 aaPredicted RBP4.32□□□□□ -1.72
RC3H1-201ENST00000258349 COTL1Q14019 142 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 LRRC10Q5BKY1 277 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 SIRT6Q8N6T7 355 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 FGF21Q9NSA1 209 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 MARCH5Q9NX47 278 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 LRP12Q9Y561 859 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 PLPP2O43688 288 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 CD1CP29017 333 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 RPS16P62249 146 aaKnown RBP4.32□□□□□ -1.72
RC3H1-201ENST00000258349 RHOBP62745 196 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 RNPS1Q15287 305 aaKnown RBP4.32□□□□□ -1.72
RC3H1-201ENST00000258349 SHBQ15464 509 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 C12orf73Q69YU5 71 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 ABLIM2Q6H8Q1 611 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 CD300LDQ6UXZ3 194 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 IFI44Q8TCB0 444 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 LINC00615Q96LM1 132 aaPredicted RBP4.32□□□□□ -1.72
RC3H1-201ENST00000258349 BET1LQ9NYM9 111 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 A6NDN8 102 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 SOX15O60248 233 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 YIF1AO95070 293 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 HRASP01112 189 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 F11P03951 625 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 HAAOP46952 286 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 CCR5P51681 352 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 DHRS2Q13268 280 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 HLXQ14774 488 aaPredicted RBP4.32□□□□□ -1.72
RC3H1-201ENST00000258349 TMEM241Q24JQ0 296 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 STUMQ69YW2 141 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 PRSS42Q7Z5A4 293 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 KMT5CQ86Y97 462 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 TBC1D29Q9UFV1 150 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 TRBV5-4A0A0C4DH59 114 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 G3V3Y1 287 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 TCAPO15273 167 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 ZNF207O43670 478 aaKnown RBP4.32□□□□□ -1.72
RC3H1-201ENST00000258349 WDR1O75083 606 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 RPL7P18124 248 aaKnown RBP4.32□□□□□ -1.72
RC3H1-201ENST00000258349 PNLIPRP2P54317 469 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 LINC00303Q3SY05 128 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 TRIM61Q5EBN2 209 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 OR2A2Q6IF42 318 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 TCTN3Q6NUS6 607 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 BTNL3Q6UXE8 466 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 CA13Q8N1Q1 262 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 OIT3Q8WWZ8 545 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 C9orf170A2RU37 121 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 OR2M5A3KFT3 312 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 AP4M1O00189 453 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 GSTZ1O43708 216 aaPredicted RBP4.32□□□□□ -1.72
RC3H1-201ENST00000258349 B4GALT3O60512 393 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 RNF165Q6ZSG1 346 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 MYPOPQ86VE0 399 aaPredicted RBP4.32□□□□□ -1.72
RC3H1-201ENST00000258349 TCTEX1D1Q8N7M0 179 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 RTN4IP1Q8WWV3 396 aaPredicted RBP4.32□□□□□ -1.72
RC3H1-201ENST00000258349 SPSB1Q96BD6 273 aa4.32□□□□□ -1.72
RC3H1-201ENST00000258349 FAM210BQ96KR6 192 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms