RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 RYDENQ9NUL5 291 aaKnown RBP16.29■□□□□ 0.2
PDLIM4-201ENST00000253754 ZNF581Q9P0T4 197 aa16.29■□□□□ 0.2
PDLIM4-201ENST00000253754 APOC1P02654 83 aa16.28■□□□□ 0.2
PDLIM4-201ENST00000253754 AMY2BP19961 511 aa16.28■□□□□ 0.2
PDLIM4-201ENST00000253754 ALDH3B1P43353 468 aa16.28■□□□□ 0.2
PDLIM4-201ENST00000253754 ATXN7L3Q14CW9 347 aaPredicted RBP16.28■□□□□ 0.2
PDLIM4-201ENST00000253754 GSG1LQ6UXU4 331 aa16.28■□□□□ 0.2
PDLIM4-201ENST00000253754 GALNTL5Q7Z4T8 443 aa16.28■□□□□ 0.2
PDLIM4-201ENST00000253754 S100A13Q99584 98 aa16.28■□□□□ 0.2
PDLIM4-201ENST00000253754 OCSTAMPQ9BR26 566 aa16.28■□□□□ 0.2
PDLIM4-201ENST00000253754 C1QTNF6Q9BXI9 259 aa16.28■□□□□ 0.2
PDLIM4-201ENST00000253754 PECRQ9BY49 303 aa16.28■□□□□ 0.2
PDLIM4-201ENST00000253754 WNT5BQ9H1J7 359 aa16.28■□□□□ 0.2
PDLIM4-201ENST00000253754 GPR35Q9HC97 309 aa16.28■□□□□ 0.2
PDLIM4-201ENST00000253754 PRR13Q9NZ81 148 aa16.28■□□□□ 0.2
PDLIM4-201ENST00000253754 TMA7Q9Y2S6 64 aaKnown RBP16.28■□□□□ 0.2
PDLIM4-201ENST00000253754 MGAQ8IWI9 3026 aa16.28■□□□□ 0.2
PDLIM4-201ENST00000253754 IGKV1-27A0A075B6S5 117 aa16.28■□□□□ 0.2
PDLIM4-201ENST00000253754 FAM230AA0A1W2PPH8 454 aa16.28■□□□□ 0.2
PDLIM4-201ENST00000253754 OR6C6A6NF89 314 aa16.28■□□□□ 0.2
PDLIM4-201ENST00000253754 FAM166BA8MTA8 275 aa16.28■□□□□ 0.2
PDLIM4-201ENST00000253754 SPRY1O43609 319 aaPredicted RBP16.28■□□□□ 0.2
PDLIM4-201ENST00000253754 HTR3BO95264 441 aa16.28■□□□□ 0.2
PDLIM4-201ENST00000253754 CD8AP01732 235 aa16.28■□□□□ 0.2
PDLIM4-201ENST00000253754 ZNF250P15622 560 aa16.28■□□□□ 0.2
PDLIM4-201ENST00000253754 RPA2P15927 270 aa16.28■□□□□ 0.2
PDLIM4-201ENST00000253754 GABRR1P24046 479 aa16.28■□□□□ 0.2
PDLIM4-201ENST00000253754 MTCP1P56278 107 aa16.28■□□□□ 0.2
PDLIM4-201ENST00000253754 PNLIPRP3Q17RR3 467 aa16.28■□□□□ 0.2
PDLIM4-201ENST00000253754 MYO7BQ6PIF6 2116 aa16.28■□□□□ 0.2
PDLIM4-201ENST00000253754 C6orf201Q7Z4U5 140 aa16.28■□□□□ 0.2
PDLIM4-201ENST00000253754 ZNF546Q86UE3 836 aa16.28■□□□□ 0.2
PDLIM4-201ENST00000253754 SKA3Q8IX90 412 aa16.28■□□□□ 0.2
PDLIM4-201ENST00000253754 OR2M7Q8NG81 312 aa16.28■□□□□ 0.2
PDLIM4-201ENST00000253754 TERB2Q8NHR7 220 aa16.28■□□□□ 0.2
PDLIM4-201ENST00000253754 COQ8AQ8NI60 647 aa16.28■□□□□ 0.2
PDLIM4-201ENST00000253754 PRELID1Q9Y255 219 aa16.28■□□□□ 0.2
PDLIM4-201ENST00000253754 I3L521 148 aa16.27■□□□□ 0.2
PDLIM4-201ENST00000253754 CYTIPO60759 359 aa16.27■□□□□ 0.2
PDLIM4-201ENST00000253754 TMEM225BP0DP42 221 aa16.27■□□□□ 0.2
PDLIM4-201ENST00000253754 ATP1B3P54709 279 aa16.27■□□□□ 0.2
PDLIM4-201ENST00000253754 SCRN3Q0VDG4 424 aa16.27■□□□□ 0.2
PDLIM4-201ENST00000253754 VAX1Q5SQQ9 334 aa16.27■□□□□ 0.2
PDLIM4-201ENST00000253754 C9orf135Q5VTT2 229 aa16.27■□□□□ 0.2
PDLIM4-201ENST00000253754 SLC16A14Q7RTX9 510 aa16.27■□□□□ 0.2
PDLIM4-201ENST00000253754 SPERTQ8NA61 448 aa16.27■□□□□ 0.2
PDLIM4-201ENST00000253754 CXorf58Q96LI9 332 aa16.27■□□□□ 0.2
PDLIM4-201ENST00000253754 PHB2Q99623 299 aa16.27■□□□□ 0.2
PDLIM4-201ENST00000253754 OR2H1Q9GZK4 316 aa16.27■□□□□ 0.2
PDLIM4-201ENST00000253754 C5orf66Q9H5L9 145 aa16.27■□□□□ 0.2
PDLIM4-201ENST00000253754 ZNF703Q9H7S9 590 aaPredicted RBP16.27■□□□□ 0.2
PDLIM4-201ENST00000253754 GHRLQ9UBU3 117 aa16.27■□□□□ 0.2
PDLIM4-201ENST00000253754 BOKQ9UMX3 212 aaPredicted RBP16.27■□□□□ 0.2
PDLIM4-201ENST00000253754 ARGFXA6NJG6 315 aa16.26■□□□□ 0.19
PDLIM4-201ENST00000253754 SPDEFO95238 335 aa16.26■□□□□ 0.19
PDLIM4-201ENST00000253754 RRASP10301 218 aa16.26■□□□□ 0.19
PDLIM4-201ENST00000253754 SPINK2P20155 84 aa16.26■□□□□ 0.19
PDLIM4-201ENST00000253754 SNU13P55769 128 aaKnown RBP16.26■□□□□ 0.19
PDLIM4-201ENST00000253754 NKAPLQ5M9Q1 402 aa16.26■□□□□ 0.19
PDLIM4-201ENST00000253754 TSPO2Q5TGU0 170 aa16.26■□□□□ 0.19
PDLIM4-201ENST00000253754 OR5H2Q8NGV7 314 aa16.26■□□□□ 0.19
PDLIM4-201ENST00000253754 OR13G1Q8NGZ3 307 aa16.26■□□□□ 0.19
PDLIM4-201ENST00000253754 PPP1R1CQ8WVI7 109 aa16.26■□□□□ 0.19
PDLIM4-201ENST00000253754 ASB13Q8WXK3 278 aa16.26■□□□□ 0.19
PDLIM4-201ENST00000253754 CPNE4Q96A23 557 aaPredicted RBP16.26■□□□□ 0.19
PDLIM4-201ENST00000253754 HDHD3Q9BSH5 251 aaPredicted RBP16.26■□□□□ 0.19
PDLIM4-201ENST00000253754 ABI3Q9P2A4 366 aa16.26■□□□□ 0.19
PDLIM4-201ENST00000253754 MPGP29372 298 aa16.26■□□□□ 0.19
PDLIM4-201ENST00000253754 GK2Q14410 553 aaPredicted RBP16.26■□□□□ 0.19
PDLIM4-201ENST00000253754 SULF2Q8IWU5 870 aa16.26■□□□□ 0.19
PDLIM4-201ENST00000253754 TMEM230Q96A57 120 aa16.26■□□□□ 0.19
PDLIM4-201ENST00000253754 DMRTA2Q96SC8 542 aa16.26■□□□□ 0.19
PDLIM4-201ENST00000253754 RDH8Q9NYR8 311 aa16.26■□□□□ 0.19
PDLIM4-201ENST00000253754 MCTS1Q9ULC4 181 aaKnown RBP16.26■□□□□ 0.19
PDLIM4-201ENST00000253754 IGKV1D-8A0A087WSZ0 117 aa16.25■□□□□ 0.19
PDLIM4-201ENST00000253754 EEF1E1-BLOC1S5C9J1V9 151 aa16.25■□□□□ 0.19
PDLIM4-201ENST00000253754 TEX46H3BTG2 121 aa16.25■□□□□ 0.19
PDLIM4-201ENST00000253754 NKX2-8O15522 239 aa16.25■□□□□ 0.19
PDLIM4-201ENST00000253754 KCNAB3O43448 404 aa16.25■□□□□ 0.19
PDLIM4-201ENST00000253754 MAGEA5P43359 124 aa16.25■□□□□ 0.19
PDLIM4-201ENST00000253754 AANATQ16613 207 aa16.25■□□□□ 0.19
PDLIM4-201ENST00000253754 BEX5Q5H9J7 111 aa16.25■□□□□ 0.19
PDLIM4-201ENST00000253754 ZNF660Q6AZW8 331 aaPredicted RBP16.25■□□□□ 0.19
PDLIM4-201ENST00000253754 LPCAT3Q6P1A2 487 aa16.25■□□□□ 0.19
PDLIM4-201ENST00000253754 CSNK2A3Q8NEV1 391 aa16.25■□□□□ 0.19
PDLIM4-201ENST00000253754 FAM173AQ9BQD7 235 aa16.25■□□□□ 0.19
PDLIM4-201ENST00000253754 TM2D1Q9BX74 207 aa16.25■□□□□ 0.19
PDLIM4-201ENST00000253754 SLC6A15Q9H2J7 730 aa16.25■□□□□ 0.19
PDLIM4-201ENST00000253754 MRPS18CQ9Y3D5 142 aaKnown RBP16.25■□□□□ 0.19
PDLIM4-201ENST00000253754 TIMM10BQ9Y5J6 103 aa16.25■□□□□ 0.19
PDLIM4-201ENST00000253754 B3GALNT1O75752 331 aa16.25■□□□□ 0.19
PDLIM4-201ENST00000253754 LHX2P50458 406 aa16.25■□□□□ 0.19
PDLIM4-201ENST00000253754 ZNF92Q03936 586 aa16.25■□□□□ 0.19
PDLIM4-201ENST00000253754 SRSF4Q08170 494 aaKnown RBP16.25■□□□□ 0.19
PDLIM4-201ENST00000253754 RIPPLY1Q0D2K3 151 aa16.25■□□□□ 0.19
PDLIM4-201ENST00000253754 OR1C1Q15619 314 aa16.25■□□□□ 0.19
PDLIM4-201ENST00000253754 KRTAP27-1Q3LI81 207 aa16.25■□□□□ 0.19
PDLIM4-201ENST00000253754 FAHD2BQ6P2I3 314 aaPredicted RBP16.25■□□□□ 0.19
PDLIM4-201ENST00000253754 IGF2-ASQ6U949 168 aa16.25■□□□□ 0.19
PDLIM4-201ENST00000253754 RFPL4BQ6ZWI9 263 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms