RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 GPR132Q9UNW8 380 aa12.18□□□□□ -0.46
SCARB2-227ENST00000640957 SLC17A4Q9Y2C5 497 aa12.18□□□□□ -0.46
SCARB2-227ENST00000640957 WDFY4Q6ZS81 3184 aa12.18□□□□□ -0.46
SCARB2-227ENST00000640957 GPR89AB7ZAQ6 455 aa12.17□□□□□ -0.46
SCARB2-227ENST00000640957 SHISA8B8ZZ34 492 aa12.17□□□□□ -0.46
SCARB2-227ENST00000640957 SLC31A2O15432 143 aa12.17□□□□□ -0.46
SCARB2-227ENST00000640957 HEXBP07686 556 aa12.17□□□□□ -0.46
SCARB2-227ENST00000640957 GPR89BP0CG08 455 aa12.17□□□□□ -0.46
SCARB2-227ENST00000640957 CRABP1P29762 137 aa12.17□□□□□ -0.46
SCARB2-227ENST00000640957 ZNF93P35789 620 aaPredicted RBP12.17□□□□□ -0.46
SCARB2-227ENST00000640957 SLC25A1P53007 311 aa12.17□□□□□ -0.46
SCARB2-227ENST00000640957 RRADP55042 308 aa12.17□□□□□ -0.46
SCARB2-227ENST00000640957 CHAF1BQ13112 559 aa12.17□□□□□ -0.46
SCARB2-227ENST00000640957 OR8G1Q15617 311 aa12.17□□□□□ -0.46
SCARB2-227ENST00000640957 PHLDA2Q53GA4 152 aa12.17□□□□□ -0.46
SCARB2-227ENST00000640957 OR13H1Q8NG92 308 aa12.17□□□□□ -0.46
SCARB2-227ENST00000640957 ADAMTS18Q8TE60 1221 aa12.17□□□□□ -0.46
SCARB2-227ENST00000640957 RAB39BQ96DA2 213 aa12.17□□□□□ -0.46
SCARB2-227ENST00000640957 VSTM2LQ96N03 204 aa12.17□□□□□ -0.46
SCARB2-227ENST00000640957 AQP10Q96PS8 301 aa12.17□□□□□ -0.46
SCARB2-227ENST00000640957 LIPGQ9Y5X9 500 aa12.17□□□□□ -0.46
SCARB2-227ENST00000640957 KNTC1P50748 2209 aa12.17□□□□□ -0.46
SCARB2-227ENST00000640957 NCOR1O75376 2440 aa12.17□□□□□ -0.46
SCARB2-227ENST00000640957 CST4P01036 141 aa12.17□□□□□ -0.46
SCARB2-227ENST00000640957 ASAH2BP0C7U1 165 aa12.17□□□□□ -0.46
SCARB2-227ENST00000640957 ZNF823P16415 610 aa12.17□□□□□ -0.46
SCARB2-227ENST00000640957 HLA-GP17693 338 aa12.17□□□□□ -0.46
SCARB2-227ENST00000640957 OPRM1P35372 400 aa12.17□□□□□ -0.46
SCARB2-227ENST00000640957 SNU13P55769 128 aaKnown RBP12.17□□□□□ -0.46
SCARB2-227ENST00000640957 NKX6-1P78426 367 aaPredicted RBP12.17□□□□□ -0.46
SCARB2-227ENST00000640957 ATG4DQ86TL0 474 aaPredicted RBP12.17□□□□□ -0.46
SCARB2-227ENST00000640957 POC1AQ8NBT0 407 aa12.17□□□□□ -0.46
SCARB2-227ENST00000640957 ASB13Q8WXK3 278 aa12.17□□□□□ -0.46
SCARB2-227ENST00000640957 SLCO5A1Q9H2Y9 848 aa12.17□□□□□ -0.46
SCARB2-227ENST00000640957 C19orf12Q9NSK7 152 aa12.17□□□□□ -0.46
SCARB2-227ENST00000640957 PIAS3Q9Y6X2 628 aa12.17□□□□□ -0.46
SCARB2-227ENST00000640957 PRSS37A4D1T9 235 aa12.17□□□□□ -0.46
SCARB2-227ENST00000640957 MASP2O00187 686 aa12.17□□□□□ -0.46
SCARB2-227ENST00000640957 H2BFMP0C1H6 154 aa12.17□□□□□ -0.46
SCARB2-227ENST00000640957 TUBG1P23258 451 aa12.17□□□□□ -0.46
SCARB2-227ENST00000640957 PTGER4P35408 488 aa12.17□□□□□ -0.46
SCARB2-227ENST00000640957 RBMXP38159 391 aaKnown RBP12.17□□□□□ -0.46
SCARB2-227ENST00000640957 KCTD18Q6PI47 426 aaPredicted RBP12.17□□□□□ -0.46
SCARB2-227ENST00000640957 CATSPERDQ86XM0 798 aa12.17□□□□□ -0.46
SCARB2-227ENST00000640957 C20orf196Q8IYI0 205 aa12.17□□□□□ -0.46
SCARB2-227ENST00000640957 TMEM217Q8N7C4 229 aa12.17□□□□□ -0.46
SCARB2-227ENST00000640957 ZNF610Q8N9Z0 462 aa12.17□□□□□ -0.46
SCARB2-227ENST00000640957 NECAP1Q8NC96 275 aa12.17□□□□□ -0.46
SCARB2-227ENST00000640957 HPSE2Q8WWQ2 592 aa12.17□□□□□ -0.46
SCARB2-227ENST00000640957 DYRK2Q92630 601 aa12.17□□□□□ -0.46
SCARB2-227ENST00000640957 ZNF581Q9P0T4 197 aa12.17□□□□□ -0.46
SCARB2-227ENST00000640957 CACNA1EQ15878 2313 aa12.16□□□□□ -0.46
SCARB2-227ENST00000640957 TMEM50BP56557 158 aa12.16□□□□□ -0.46
SCARB2-227ENST00000640957 AKR1C8PQ5T2L2 129 aa12.16□□□□□ -0.46
SCARB2-227ENST00000640957 WBP2NLQ6ICG8 309 aa12.16□□□□□ -0.46
SCARB2-227ENST00000640957 ZNF880Q6PDB4 577 aa12.16□□□□□ -0.46
SCARB2-227ENST00000640957 HEPN1Q6WQI6 88 aa12.16□□□□□ -0.46
SCARB2-227ENST00000640957 SHISA6Q6ZSJ9 500 aa12.16□□□□□ -0.46
SCARB2-227ENST00000640957 TMEM123Q8N131 208 aa12.16□□□□□ -0.46
SCARB2-227ENST00000640957 SLC37A2Q8TED4 501 aa12.16□□□□□ -0.46
SCARB2-227ENST00000640957 TCTN2Q96GX1 697 aa12.16□□□□□ -0.46
SCARB2-227ENST00000640957 S100A13Q99584 98 aa12.16□□□□□ -0.46
SCARB2-227ENST00000640957 OR10A5Q9H207 317 aa12.16□□□□□ -0.46
SCARB2-227ENST00000640957 PARP11Q9NR21 331 aa12.16□□□□□ -0.46
SCARB2-227ENST00000640957 HDGFL3Q9Y3E1 203 aa12.16□□□□□ -0.46
SCARB2-227ENST00000640957 A0A087WZY1 265 aa12.16□□□□□ -0.46
SCARB2-227ENST00000640957 TRBV6-7A0A0A0MS04 114 aa12.16□□□□□ -0.46
SCARB2-227ENST00000640957 H3BQ15 152 aa12.16□□□□□ -0.46
SCARB2-227ENST00000640957 PGA4P0DJD7 388 aa12.16□□□□□ -0.46
SCARB2-227ENST00000640957 PGA5P0DJD9 388 aa12.16□□□□□ -0.46
SCARB2-227ENST00000640957 HHEXQ03014 270 aa12.16□□□□□ -0.46
SCARB2-227ENST00000640957 PCK2Q16822 640 aa12.16□□□□□ -0.46
SCARB2-227ENST00000640957 CARD17Q5XLA6 110 aa12.16□□□□□ -0.46
SCARB2-227ENST00000640957 C1QL2Q7Z5L3 287 aa12.16□□□□□ -0.46
SCARB2-227ENST00000640957 THAP3Q8WTV1 239 aaPredicted RBP12.16□□□□□ -0.46
SCARB2-227ENST00000640957 FRZBQ92765 325 aa12.16□□□□□ -0.46
SCARB2-227ENST00000640957 PRRX2Q99811 253 aa12.16□□□□□ -0.46
SCARB2-227ENST00000640957 MAGT1Q9H0U3 335 aa12.16□□□□□ -0.46
SCARB2-227ENST00000640957 NXF5Q9H1B4 397 aaKnown RBP12.16□□□□□ -0.46
SCARB2-227ENST00000640957 FAM212BQ9NTI7 297 aaPredicted RBP12.16□□□□□ -0.46
SCARB2-227ENST00000640957 LDLRAD4O15165 306 aa12.15□□□□□ -0.46
SCARB2-227ENST00000640957 CDAP32320 146 aa12.15□□□□□ -0.46
SCARB2-227ENST00000640957 TMEM268Q5VZI3 342 aa12.15□□□□□ -0.46
SCARB2-227ENST00000640957 ABHD12BQ7Z5M8 362 aaPredicted RBP12.15□□□□□ -0.46
SCARB2-227ENST00000640957 C5orf24Q7Z6I8 188 aa12.15□□□□□ -0.46
SCARB2-227ENST00000640957 FNDC9Q8TBE3 224 aa12.15□□□□□ -0.46
SCARB2-227ENST00000640957 CTHRC1Q96CG8 243 aa12.15□□□□□ -0.46
SCARB2-227ENST00000640957 BMFQ96LC9 184 aa12.15□□□□□ -0.46
SCARB2-227ENST00000640957 DGAT2Q96PD7 388 aa12.15□□□□□ -0.46
SCARB2-227ENST00000640957 LMF2Q9BU23 707 aaKnown RBP12.15□□□□□ -0.46
SCARB2-227ENST00000640957 SLC35B3Q9H1N7 401 aa12.15□□□□□ -0.46
SCARB2-227ENST00000640957 POLR1DQ9Y2S0 133 aa12.15□□□□□ -0.46
SCARB2-227ENST00000640957 A0A1W2PR80 420 aa12.15□□□□□ -0.46
SCARB2-227ENST00000640957 SCDO00767 359 aa12.15□□□□□ -0.46
SCARB2-227ENST00000640957 ONECUT2O95948 504 aa12.15□□□□□ -0.46
SCARB2-227ENST00000640957 TRGC1P0CF51 173 aa12.15□□□□□ -0.46
SCARB2-227ENST00000640957 HIST1H1BP16401 226 aaKnown RBP12.15□□□□□ -0.46
SCARB2-227ENST00000640957 SLC37A1P57057 533 aa12.15□□□□□ -0.46
SCARB2-227ENST00000640957 GGNBP1Q5YKI7 109 aa12.15□□□□□ -0.46
SCARB2-227ENST00000640957 MEX3BQ6ZN04 569 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms