RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 KLHL12Q53G59 568 aa3.81□□□□□ -1.8
CUL3-216ENST00000617432 DMRTC1Q5HYR2 192 aa3.81□□□□□ -1.8
CUL3-216ENST00000617432 FAHD2BQ6P2I3 314 aaPredicted RBP3.81□□□□□ -1.8
CUL3-216ENST00000617432 DUX4L9Q6RFH8 374 aaPredicted RBP3.81□□□□□ -1.8
CUL3-216ENST00000617432 LYPD2Q6UXB3 125 aa3.81□□□□□ -1.8
CUL3-216ENST00000617432 COLCA1Q6ZS62 124 aa3.81□□□□□ -1.8
CUL3-216ENST00000617432 ZNF826PQ6ZT77 177 aa3.81□□□□□ -1.8
CUL3-216ENST00000617432 DCXRQ7Z4W1 244 aa3.81□□□□□ -1.8
CUL3-216ENST00000617432 WDR86Q86TI4 376 aa3.81□□□□□ -1.8
CUL3-216ENST00000617432 MOGAT3Q86VF5 341 aa3.81□□□□□ -1.8
CUL3-216ENST00000617432 SPATA24Q86W54 205 aa3.81□□□□□ -1.8
CUL3-216ENST00000617432 ZNF283Q8N7M2 679 aa3.81□□□□□ -1.8
CUL3-216ENST00000617432 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.81□□□□□ -1.8
CUL3-216ENST00000617432 ATG16L2Q8NAA4 619 aa3.81□□□□□ -1.8
CUL3-216ENST00000617432 ZNF540Q8NDQ6 660 aa3.81□□□□□ -1.8
CUL3-216ENST00000617432 OR52L1Q8NGH7 329 aa3.81□□□□□ -1.8
CUL3-216ENST00000617432 OR6K6Q8NGW6 343 aa3.81□□□□□ -1.8
CUL3-216ENST00000617432 ST7LQ8TDW4 575 aa3.81□□□□□ -1.8
CUL3-216ENST00000617432 OTULINQ96BN8 352 aa3.81□□□□□ -1.8
CUL3-216ENST00000617432 HAVCR1Q96D42 359 aa3.81□□□□□ -1.8
CUL3-216ENST00000617432 SLAMF6Q96DU3 332 aa3.81□□□□□ -1.8
CUL3-216ENST00000617432 ZMYND19Q96E35 227 aaPredicted RBP3.81□□□□□ -1.8
CUL3-216ENST00000617432 SEH1LQ96EE3 360 aa3.81□□□□□ -1.8
CUL3-216ENST00000617432 FAHD2AQ96GK7 314 aa3.81□□□□□ -1.8
CUL3-216ENST00000617432 ATF6BQ99941 703 aa3.81□□□□□ -1.8
CUL3-216ENST00000617432 GAL3ST1Q99999 423 aa3.81□□□□□ -1.8
CUL3-216ENST00000617432 CHCHD6Q9BRQ6 235 aa3.81□□□□□ -1.8
CUL3-216ENST00000617432 C19orf24Q9BVV8 132 aa3.81□□□□□ -1.8
CUL3-216ENST00000617432 CADM1Q9BY67 442 aaKnown RBP3.81□□□□□ -1.8
CUL3-216ENST00000617432 NMNAT2Q9BZQ4 307 aa3.81□□□□□ -1.8
CUL3-216ENST00000617432 TRIM15Q9C019 465 aa3.81□□□□□ -1.8
CUL3-216ENST00000617432 FGF23Q9GZV9 251 aaPredicted RBP3.81□□□□□ -1.8
CUL3-216ENST00000617432 HDHD2Q9H0R4 259 aa3.81□□□□□ -1.8
CUL3-216ENST00000617432 MAGIXQ9H6Y5 334 aa3.81□□□□□ -1.8
CUL3-216ENST00000617432 REEP1Q9H902 201 aa3.81□□□□□ -1.8
CUL3-216ENST00000617432 ELOVL3Q9HB03 270 aa3.81□□□□□ -1.8
CUL3-216ENST00000617432 NTN4Q9HB63 628 aa3.81□□□□□ -1.8
CUL3-216ENST00000617432 KRCC1Q9NPI7 259 aaPredicted RBP3.81□□□□□ -1.8
CUL3-216ENST00000617432 ESM1Q9NQ30 184 aa3.81□□□□□ -1.8
CUL3-216ENST00000617432 UFSP2Q9NUQ7 469 aa3.81□□□□□ -1.8
CUL3-216ENST00000617432 IL20Q9NYY1 176 aa3.81□□□□□ -1.8
CUL3-216ENST00000617432 DNAJC27Q9NZQ0 273 aa3.81□□□□□ -1.8
CUL3-216ENST00000617432 PDP1Q9P0J1 537 aaPredicted RBP3.81□□□□□ -1.8
CUL3-216ENST00000617432 DUX4Q9UBX2 424 aa3.81□□□□□ -1.8
CUL3-216ENST00000617432 PRPF19Q9UMS4 504 aaKnown RBP3.81□□□□□ -1.8
CUL3-216ENST00000617432 POMPQ9Y244 141 aa3.81□□□□□ -1.8
CUL3-216ENST00000617432 NPTNQ9Y639 398 aa3.81□□□□□ -1.8
CUL3-216ENST00000617432 ARHGAP32A7KAX9 2087 aa3.81□□□□□ -1.8
CUL3-216ENST00000617432 IGHV3OR15-7A0A075B7D8 119 aa3.8□□□□□ -1.8
CUL3-216ENST00000617432 MDFIC2A0A1B0GVS7 189 aa3.8□□□□□ -1.8
CUL3-216ENST00000617432 TCRBV3S1A0A5B6 114 aa3.8□□□□□ -1.8
CUL3-216ENST00000617432 CCDC182A6NF36 153 aa3.8□□□□□ -1.8
CUL3-216ENST00000617432 CEACAM18A8MTB9 384 aa3.8□□□□□ -1.8
CUL3-216ENST00000617432 IQCF6A8MYZ5 107 aa3.8□□□□□ -1.8
CUL3-216ENST00000617432 B4DSR2 109 aa3.8□□□□□ -1.8
CUL3-216ENST00000617432 F5H0A9 414 aaPredicted RBP3.8□□□□□ -1.8
CUL3-216ENST00000617432 H3BN98 237 aa3.8□□□□□ -1.8
CUL3-216ENST00000617432 TMEM178BH3BS89 294 aa3.8□□□□□ -1.8
CUL3-216ENST00000617432 M0R135 149 aa3.8□□□□□ -1.8
CUL3-216ENST00000617432 AP4M1O00189 453 aa3.8□□□□□ -1.8
CUL3-216ENST00000617432 PSMD9O00233 223 aa3.8□□□□□ -1.8
CUL3-216ENST00000617432 ZNF593O00488 134 aaPredicted RBP3.8□□□□□ -1.8
CUL3-216ENST00000617432 MAGEB4O15481 346 aaPredicted RBP3.8□□□□□ -1.8
CUL3-216ENST00000617432 FKBP6O75344 327 aa3.8□□□□□ -1.8
CUL3-216ENST00000617432 TOMM40O96008 361 aa3.8□□□□□ -1.8
CUL3-216ENST00000617432 MT-ND5P03915 603 aa3.8□□□□□ -1.8
CUL3-216ENST00000617432 LCATP04180 440 aa3.8□□□□□ -1.8
CUL3-216ENST00000617432 MRPL3P09001 348 aaKnown RBP3.8□□□□□ -1.8
CUL3-216ENST00000617432 CA6P23280 308 aa3.8□□□□□ -1.8
CUL3-216ENST00000617432 EPHA2P29317 976 aa3.8□□□□□ -1.8
CUL3-216ENST00000617432 CRABP1P29762 137 aa3.8□□□□□ -1.8
CUL3-216ENST00000617432 IFNGR2P38484 337 aa3.8□□□□□ -1.8
CUL3-216ENST00000617432 NAA10P41227 235 aaPredicted RBP3.8□□□□□ -1.8
CUL3-216ENST00000617432 ENTPD1P49961 510 aa3.8□□□□□ -1.8
CUL3-216ENST00000617432 RAD23AP54725 363 aa3.8□□□□□ -1.8
CUL3-216ENST00000617432 DLX1P56177 255 aa3.8□□□□□ -1.8
CUL3-216ENST00000617432 TMEM33P57088 247 aa3.8□□□□□ -1.8
CUL3-216ENST00000617432 BTG1P62324 171 aa3.8□□□□□ -1.8
CUL3-216ENST00000617432 MRPS11P82912 194 aaKnown RBP3.8□□□□□ -1.8
CUL3-216ENST00000617432 CBX1P83916 185 aa3.8□□□□□ -1.8
CUL3-216ENST00000617432 PRB3Q04118 309 aaPredicted RBP3.8□□□□□ -1.8
CUL3-216ENST00000617432 EIF2B1Q14232 305 aaKnown RBP3.8□□□□□ -1.8
CUL3-216ENST00000617432 GINS1Q14691 196 aa3.8□□□□□ -1.8
CUL3-216ENST00000617432 FAM98BQ52LJ0 330 aaKnown RBP3.8□□□□□ -1.8
CUL3-216ENST00000617432 KLF17Q5JT82 389 aaPredicted RBP3.8□□□□□ -1.8
CUL3-216ENST00000617432 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.8□□□□□ -1.81e-6■■■■■ 36.8
CUL3-216ENST00000617432 PLBD1Q6P4A8 553 aa3.8□□□□□ -1.8
CUL3-216ENST00000617432 DNM1P34Q6PK57 102 aa3.8□□□□□ -1.8
CUL3-216ENST00000617432 FBXW12Q6X9E4 464 aa3.8□□□□□ -1.8
CUL3-216ENST00000617432 DPY19L4Q7Z388 723 aa3.8□□□□□ -1.8
CUL3-216ENST00000617432 ANKRD13BQ86YJ7 626 aa3.8□□□□□ -1.8
CUL3-216ENST00000617432 ERI1Q8IV48 349 aaKnown RBP3.8□□□□□ -1.8
CUL3-216ENST00000617432 TIGD4Q8IY51 512 aa3.8□□□□□ -1.8
CUL3-216ENST00000617432 OR2C3Q8N628 320 aa3.8□□□□□ -1.8
CUL3-216ENST00000617432 ZBTB34Q8NCN2 500 aa3.8□□□□□ -1.8
CUL3-216ENST00000617432 DEFB108BQ8NET1 73 aa3.8□□□□□ -1.8
CUL3-216ENST00000617432 GJC3Q8NFK1 279 aa3.8□□□□□ -1.8
CUL3-216ENST00000617432 OR8G5Q8NG78 346 aa3.8□□□□□ -1.8
CUL3-216ENST00000617432 OR56B2PQ8NGI1 322 aa3.8□□□□□ -1.8
CUL3-216ENST00000617432 OR6N2Q8NGY6 317 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms