RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 OR4A4PQ8NGN8 299 aa2.04□□□□□ -2.08
SCAMP1-205ENST00000614488 OR52E5Q8NH55 327 aa2.04□□□□□ -2.08
SCAMP1-205ENST00000614488 NUBPLQ8TB37 319 aa2.04□□□□□ -2.08
SCAMP1-205ENST00000614488 CIDECQ96AQ7 238 aaPredicted RBP2.04□□□□□ -2.08
SCAMP1-205ENST00000614488 TMEM175Q9BSA9 504 aa2.04□□□□□ -2.08
SCAMP1-205ENST00000614488 CHID1Q9BWS9 393 aa2.04□□□□□ -2.08
SCAMP1-205ENST00000614488 RAB1BQ9H0U4 201 aa2.04□□□□□ -2.08
SCAMP1-205ENST00000614488 ZNF302Q9NR11 478 aa2.04□□□□□ -2.08
SCAMP1-205ENST00000614488 EURLQ9NYK6 297 aa2.04□□□□□ -2.08
SCAMP1-205ENST00000614488 IFNKQ9P0W0 207 aa2.04□□□□□ -2.08
SCAMP1-205ENST00000614488 POFUT2Q9Y2G5 429 aa2.04□□□□□ -2.08
SCAMP1-205ENST00000614488 BAZ2AQ9UIF9 1905 aaKnown RBP2.03□□□□□ -2.08
SCAMP1-205ENST00000614488 MYO16Q9Y6X6 1858 aa2.03□□□□□ -2.08
SCAMP1-205ENST00000614488 COL22A1Q8NFW1 1626 aaPredicted RBP2.03□□□□□ -2.08
SCAMP1-205ENST00000614488 SMIM26A0A096LP01 95 aa2.03□□□□□ -2.08
SCAMP1-205ENST00000614488 IGHV3OR16-9A0A0B4J2B5 98 aa2.03□□□□□ -2.08
SCAMP1-205ENST00000614488 KBTBD11-OT1A0A1B0GTJ5 212 aa2.03□□□□□ -2.08
SCAMP1-205ENST00000614488 CALUO43852 315 aaPredicted RBP2.03□□□□□ -2.08
SCAMP1-205ENST00000614488 SMC2O95347 1197 aa2.03□□□□□ -2.08
SCAMP1-205ENST00000614488 BCKDHBP21953 392 aa2.03□□□□□ -2.08
SCAMP1-205ENST00000614488 IL12BP29460 328 aa2.03□□□□□ -2.08
SCAMP1-205ENST00000614488 SPAM1P38567 509 aa2.03□□□□□ -2.08
SCAMP1-205ENST00000614488 HAAOP46952 286 aa2.03□□□□□ -2.08
SCAMP1-205ENST00000614488 BLVRAP53004 296 aa2.03□□□□□ -2.08
SCAMP1-205ENST00000614488 UBE2MP61081 183 aaKnown RBP2.03□□□□□ -2.08
SCAMP1-205ENST00000614488 PSMC5P62195 406 aa2.03□□□□□ -2.08
SCAMP1-205ENST00000614488 LCN2P80188 198 aa2.03□□□□□ -2.08
SCAMP1-205ENST00000614488 RAD51Q06609 339 aa2.03□□□□□ -2.08
SCAMP1-205ENST00000614488 ITGB3BPQ13352 177 aaPredicted RBP2.03□□□□□ -2.08
SCAMP1-205ENST00000614488 DGCR6Q14129 220 aa2.03□□□□□ -2.08
SCAMP1-205ENST00000614488 DMC1Q14565 340 aa2.03□□□□□ -2.08
SCAMP1-205ENST00000614488 USF2Q15853 346 aaPredicted RBP2.03□□□□□ -2.08
SCAMP1-205ENST00000614488 ZNF470Q6ECI4 717 aa2.03□□□□□ -2.08
SCAMP1-205ENST00000614488 REEP3Q6NUK4 255 aa2.03□□□□□ -2.08
SCAMP1-205ENST00000614488 SLC16A14Q7RTX9 510 aa2.03□□□□□ -2.08
SCAMP1-205ENST00000614488 CYP4Z1Q86W10 505 aa2.03□□□□□ -2.08
SCAMP1-205ENST00000614488 CMTM1Q8IZ96 169 aa2.03□□□□□ -2.08
SCAMP1-205ENST00000614488 OR51E1Q8TCB6 317 aa2.03□□□□□ -2.08
SCAMP1-205ENST00000614488 CPNE4Q96A23 557 aaPredicted RBP2.03□□□□□ -2.08
SCAMP1-205ENST00000614488 UQCC2Q9BRT2 126 aa2.03□□□□□ -2.08
SCAMP1-205ENST00000614488 TMEM243Q9BU79 118 aa2.03□□□□□ -2.08
SCAMP1-205ENST00000614488 NSRP1Q9H0G5 558 aaKnown RBP2.03□□□□□ -2.08
SCAMP1-205ENST00000614488 GOLPH3Q9H4A6 298 aa2.03□□□□□ -2.08
SCAMP1-205ENST00000614488 BEX1Q9HBH7 125 aa2.03□□□□□ -2.08
SCAMP1-205ENST00000614488 MS4A12Q9NXJ0 267 aa2.03□□□□□ -2.08
SCAMP1-205ENST00000614488 ADA2Q9NZK5 511 aa2.03□□□□□ -2.08
SCAMP1-205ENST00000614488 SLC17A7Q9P2U7 560 aa2.03□□□□□ -2.08
SCAMP1-205ENST00000614488 CLN8Q9UBY8 286 aa2.03□□□□□ -2.08
SCAMP1-205ENST00000614488 SBNO1A3KN83 1393 aa2.02□□□□□ -2.09
SCAMP1-205ENST00000614488 TRBV9A0A0B4J1U6 114 aa2.02□□□□□ -2.09
SCAMP1-205ENST00000614488 A0A1B0GW15 77 aa2.02□□□□□ -2.09
SCAMP1-205ENST00000614488 ZNF878C9JN71 531 aa2.02□□□□□ -2.09
SCAMP1-205ENST00000614488 M0R3G1 203 aa2.02□□□□□ -2.09
SCAMP1-205ENST00000614488 ZBTB5O15062 677 aa2.02□□□□□ -2.09
SCAMP1-205ENST00000614488 HUS1O60921 280 aa2.02□□□□□ -2.09
SCAMP1-205ENST00000614488 SCN2BO60939 215 aa2.02□□□□□ -2.09
SCAMP1-205ENST00000614488 FCN3O75636 299 aa2.02□□□□□ -2.09
SCAMP1-205ENST00000614488 IFNW1P05000 195 aa2.02□□□□□ -2.09
SCAMP1-205ENST00000614488 MYL2P10916 166 aa2.02□□□□□ -2.09
SCAMP1-205ENST00000614488 PMCHP20382 165 aa2.02□□□□□ -2.09
SCAMP1-205ENST00000614488 IL32P24001 234 aa2.02□□□□□ -2.09
SCAMP1-205ENST00000614488 GABRR2P28476 465 aa2.02□□□□□ -2.09
SCAMP1-205ENST00000614488 GALR1P47211 349 aa2.02□□□□□ -2.09
SCAMP1-205ENST00000614488 UBE2IP63279 158 aaKnown RBP2.02□□□□□ -2.09
SCAMP1-205ENST00000614488 MRPS15P82914 257 aaKnown RBP2.02□□□□□ -2.09
SCAMP1-205ENST00000614488 STX3Q13277 289 aa2.02□□□□□ -2.09
SCAMP1-205ENST00000614488 PMS2P3Q13401 168 aa2.02□□□□□ -2.09
SCAMP1-205ENST00000614488 IHHQ14623 411 aa2.02□□□□□ -2.09
SCAMP1-205ENST00000614488 TSC22D1Q15714 1073 aa2.02□□□□□ -2.09
SCAMP1-205ENST00000614488 C18orf21Q32NC0 220 aaPredicted RBP2.02□□□□□ -2.09
SCAMP1-205ENST00000614488 SLC25A35Q3KQZ1 300 aa2.02□□□□□ -2.09
SCAMP1-205ENST00000614488 KLHL12Q53G59 568 aa2.02□□□□□ -2.09
SCAMP1-205ENST00000614488 TPTE2P1Q5T6R2 138 aa2.02□□□□□ -2.09
SCAMP1-205ENST00000614488 STUMQ69YW2 141 aa2.02□□□□□ -2.09
SCAMP1-205ENST00000614488 ZFAND6Q6FIF0 208 aa2.02□□□□□ -2.09
SCAMP1-205ENST00000614488 C22orf42Q6IC83 251 aa2.02□□□□□ -2.09
SCAMP1-205ENST00000614488 FAM122BQ7Z309 247 aa2.02□□□□□ -2.09
SCAMP1-205ENST00000614488 CBLN2Q8IUK8 224 aa2.02□□□□□ -2.09
SCAMP1-205ENST00000614488 ARHGAP18Q8N392 663 aa2.02□□□□□ -2.09
SCAMP1-205ENST00000614488 TRAM1L1Q8N609 369 aa2.02□□□□□ -2.09
SCAMP1-205ENST00000614488 ZNF645Q8N7E2 425 aa2.02□□□□□ -2.09
SCAMP1-205ENST00000614488 C8orf31Q8N9H6 132 aa2.02□□□□□ -2.09
SCAMP1-205ENST00000614488 DNAAF3Q8N9W5 541 aa2.02□□□□□ -2.09
SCAMP1-205ENST00000614488 GPR26Q8NDV2 337 aa2.02□□□□□ -2.09
SCAMP1-205ENST00000614488 TCP10LQ8TDR4 215 aa2.02□□□□□ -2.09
SCAMP1-205ENST00000614488 ANKRD7Q92527 254 aa2.02□□□□□ -2.09
SCAMP1-205ENST00000614488 NAT6Q93015 286 aa2.02□□□□□ -2.09
SCAMP1-205ENST00000614488 C8orf44Q96CB5 159 aa2.02□□□□□ -2.09
SCAMP1-205ENST00000614488 GLT1D1Q96MS3 346 aa2.02□□□□□ -2.09
SCAMP1-205ENST00000614488 RNF145Q96MT1 663 aa2.02□□□□□ -2.09
SCAMP1-205ENST00000614488 TOLLIPQ9H0E2 274 aa2.02□□□□□ -2.09
SCAMP1-205ENST00000614488 PRSS16Q9NQE7 514 aa2.02□□□□□ -2.09
SCAMP1-205ENST00000614488 SDHAF3Q9NRP4 125 aa2.02□□□□□ -2.09
SCAMP1-205ENST00000614488 SCML1Q9UN30 329 aa2.02□□□□□ -2.09
SCAMP1-205ENST00000614488 KCNE1BA0A087WTH5 132 aa2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 GSTTP1A0A1W2PQM5 241 aa2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 SYCE1LA8MT33 242 aa2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 SMLR1H3BR10 107 aa2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 H7C1H1 209 aa2.01□□□□□ -2.09
SCAMP1-205ENST00000614488 GOLGA8RI6L899 631 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms