RNA–Protein interactions for RNA: ENST00000611646.4

RNF38-210, Transcript of ring finger protein 38, humanhuman

TSL 5 BASIC

Gene RNF38, Length 5,185 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-210ENST00000611646 DEFB108AA8MXU0 73 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 OGG1O15527 345 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 EIF1BO60739 113 aaKnown RBP3.38□□□□□ -1.87
RNF38-210ENST00000611646 MPC2O95563 127 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 ARG1P05089 322 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 SULT1A3P0DMM9 295 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 SULT1A4P0DMN0 295 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 IRF2P14316 349 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 GLB1P16278 677 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 KIR2DL1P43626 348 aaPredicted RBP3.38□□□□□ -1.87
RNF38-210ENST00000611646 HOXA1P49639 335 aaPredicted RBP3.38□□□□□ -1.87
RNF38-210ENST00000611646 ZNF133P52736 654 aaPredicted RBP3.38□□□□□ -1.87
RNF38-210ENST00000611646 UBE2G2P60604 165 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 FOXK1P85037 733 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 DEFA6Q01524 100 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 ZNF816Q0VGE8 651 aaPredicted RBP3.38□□□□□ -1.87
RNF38-210ENST00000611646 PLGLAQ15195 96 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 C3AR1Q16581 482 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 TUSC1Q2TAM9 212 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 TMEM128Q5BJH2 165 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 LPCAT3Q6P1A2 487 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 C5orf46Q6UWT4 87 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 ATG4DQ86TL0 474 aaPredicted RBP3.38□□□□□ -1.87
RNF38-210ENST00000611646 CDC20BQ86Y33 519 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 SLC22A18ASQ8N1D0 253 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 CLRN3Q8NCR9 226 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 DEFB108BQ8NET1 73 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 OR6S1Q8NH40 331 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 SNIP1Q8TAD8 396 aaKnown RBP3.38□□□□□ -1.87
RNF38-210ENST00000611646 ZNRF4Q8WWF5 429 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 NAT6Q93015 286 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 C2orf50Q96LR7 162 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 SAMD10Q9BYL1 202 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 BCO1Q9HAY6 547 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 RGPD3A6NKT7 1758 aaPredicted RBP3.38□□□□□ -1.87
RNF38-210ENST00000611646 RGPD4Q7Z3J3 1758 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 RNASEK-C17orf49H0YIS7 233 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 FOXS1O43638 330 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 CDC14BO60729 498 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 EIF3GO75821 320 aaKnown RBP eCLIP3.38□□□□□ -1.87
RNF38-210ENST00000611646 BCKDHBP21953 392 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 INSM1Q01101 510 aaPredicted RBP3.38□□□□□ -1.87
RNF38-210ENST00000611646 TLE4Q04727 773 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 SHBQ15464 509 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 ZNF141Q15928 474 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 PDLIM3Q53GG5 364 aaPredicted RBP3.38□□□□□ -1.87
RNF38-210ENST00000611646 ELFN2Q5R3F8 820 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 WDR5BQ86VZ2 330 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 LRP11Q86VZ4 500 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 FAM24BQ8N5W8 94 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 OR8B12Q8NGG6 310 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 MITD1Q8WV92 249 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 ADAT3Q96EY9 351 aaPredicted RBP3.38□□□□□ -1.87
RNF38-210ENST00000611646 C10orf90Q96M02 699 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 TMEM68Q96MH6 324 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 LRFN5Q96NI6 719 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 OPN4Q9UHM6 478 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 OSGIN2Q9Y236 505 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 AMDHD2Q9Y303 409 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 PCDHGA9Q9Y5G4 932 aaKnown RBP3.38□□□□□ -1.87
RNF38-210ENST00000611646 DSPPQ9NZW4 1301 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 IGHV1OR21-1A0A087WYE8 117 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 A0A087WZY1 265 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 TRAV20A0A0B4J274 112 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 hCG_1809904A0A1W2PP81 198 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 A0A1W2PR64 198 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 A0A1W2PRV1 198 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 PLSCR5A0PG75 271 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 ANKUB1A6NFN9 424 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 FAM24AA6NFZ4 105 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 OR4C45A6NMZ5 311 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 ARPC3O15145 178 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 DHHO43323 396 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 PTP4A3O75365 173 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 ZIC2O95409 532 aaPredicted RBP3.38□□□□□ -1.87
RNF38-210ENST00000611646 IL5P05113 134 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 OR5AC1P0C628 307 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 HIST1H1DP16402 221 aaKnown RBP3.38□□□□□ -1.87
RNF38-210ENST00000611646 RCC1P18754 421 aaPredicted RBP3.38□□□□□ -1.87
RNF38-210ENST00000611646 GALNSP34059 522 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 KIR3DL2P43630 455 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 SLC25A1P53007 311 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 FGF8P55075 233 aaPredicted RBP3.38□□□□□ -1.87
RNF38-210ENST00000611646 SKP2Q13309 424 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 ZNF239Q16600 458 aaKnown RBP3.38□□□□□ -1.87
RNF38-210ENST00000611646 C9orf40Q8IXQ3 194 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 OR11G2Q8NGC1 345 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 ST8SIA1Q92185 356 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 APH1AQ96BI3 265 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 SEH1LQ96EE3 360 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 PGLYRP3Q96LB9 341 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 UCN2Q96RP3 112 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 GPHA2Q96T91 129 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 ZNF275Q9NSD4 429 aaPredicted RBP3.38□□□□□ -1.87
RNF38-210ENST00000611646 KLK13Q9UKR3 277 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 ZMIZ1Q9ULJ6 1067 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 SF3B6Q9Y3B4 125 aaKnown RBP3.38□□□□□ -1.87
RNF38-210ENST00000611646 CCDC88CQ9P219 2028 aa3.38□□□□□ -1.87
RNF38-210ENST00000611646 NYNRINQ9P2P1 1898 aaKnown RBP3.38□□□□□ -1.87
RNF38-210ENST00000611646 LOC101059948A0A1B0GTJ6 334 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms