RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 MDFIC2A0A1B0GVS7 189 aa14.58□□□□□ -0.08
SHKBP1-203ENST00000594298 A0A1W2PQL4 384 aaPredicted RBP14.58□□□□□ -0.08
SHKBP1-203ENST00000594298 ERICH4A6NGS2 130 aa14.58□□□□□ -0.08
SHKBP1-203ENST00000594298 ANXA2P2A6NMY6 339 aa14.58□□□□□ -0.08
SHKBP1-203ENST00000594298 SRRM5B3KS81 715 aa14.58□□□□□ -0.08
SHKBP1-203ENST00000594298 HOXA3O43365 443 aaPredicted RBP14.58□□□□□ -0.08
SHKBP1-203ENST00000594298 MTRF1O75570 445 aaKnown RBP14.58□□□□□ -0.08
SHKBP1-203ENST00000594298 ELF3P78545 371 aaPredicted RBP14.58□□□□□ -0.08
SHKBP1-203ENST00000594298 DEFB112Q30KQ8 113 aa14.58□□□□□ -0.08
SHKBP1-203ENST00000594298 BCL2L15Q5TBC7 163 aa14.58□□□□□ -0.08
SHKBP1-203ENST00000594298 WDR25Q64LD2 544 aaPredicted RBP14.58□□□□□ -0.08
SHKBP1-203ENST00000594298 ZNF841Q6ZN19 808 aa14.58□□□□□ -0.08
SHKBP1-203ENST00000594298 FAM220AQ7Z4H9 259 aa14.58□□□□□ -0.08
SHKBP1-203ENST00000594298 KCTD20Q7Z5Y7 419 aa14.58□□□□□ -0.08
SHKBP1-203ENST00000594298 COMMD2Q86X83 199 aa14.58□□□□□ -0.08
SHKBP1-203ENST00000594298 NOX4Q9NPH5 578 aa14.58□□□□□ -0.08
SHKBP1-203ENST00000594298 GTF2A1LQ9UNN4 478 aa14.58□□□□□ -0.08
SHKBP1-203ENST00000594298 IGHV3-64DA0A0J9YX35 117 aa14.57□□□□□ -0.08
SHKBP1-203ENST00000594298 DAPL1A0PJW8 107 aa14.57□□□□□ -0.08
SHKBP1-203ENST00000594298 PRR32B1ATL7 298 aa14.57□□□□□ -0.08
SHKBP1-203ENST00000594298 CASQ2O14958 399 aaPredicted RBP14.57□□□□□ -0.08
SHKBP1-203ENST00000594298 APOL3O95236 402 aa14.57□□□□□ -0.08
SHKBP1-203ENST00000594298 PTBP3O95758 552 aaKnown RBP14.57□□□□□ -0.08
SHKBP1-203ENST00000594298 GABRB1P18505 474 aa14.57□□□□□ -0.08
SHKBP1-203ENST00000594298 PEX2P28328 305 aa14.57□□□□□ -0.08
SHKBP1-203ENST00000594298 PSMB10P40306 273 aa14.57□□□□□ -0.08
SHKBP1-203ENST00000594298 FGF12P61328 243 aa14.57□□□□□ -0.08
SHKBP1-203ENST00000594298 IL5RAQ01344 420 aa14.57□□□□□ -0.08
SHKBP1-203ENST00000594298 FAM201AQ5SY85 155 aa14.57□□□□□ -0.08
SHKBP1-203ENST00000594298 BRD3OSQ6XYD6 125 aa14.57□□□□□ -0.08
SHKBP1-203ENST00000594298 DHRSXQ8N5I4 330 aa14.57□□□□□ -0.08
SHKBP1-203ENST00000594298 SETD9Q8NE22 299 aa14.57□□□□□ -0.08
SHKBP1-203ENST00000594298 HIST1H2AAQ96QV6 131 aa14.57□□□□□ -0.08
SHKBP1-203ENST00000594298 MICU1Q9BPX6 476 aa14.57□□□□□ -0.08
SHKBP1-203ENST00000594298 PAPOLGQ9BWT3 736 aaKnown RBP14.57□□□□□ -0.08
SHKBP1-203ENST00000594298 OR52A1Q9UKL2 312 aa14.57□□□□□ -0.08
SHKBP1-203ENST00000594298 EXOGQ9Y2C4 368 aaKnown RBP14.57□□□□□ -0.08
SHKBP1-203ENST00000594298 RHBDD3Q9Y3P4 386 aa14.57□□□□□ -0.08
SHKBP1-203ENST00000594298 RPL36Q9Y3U8 105 aaKnown RBP14.57□□□□□ -0.08
SHKBP1-203ENST00000594298 MAGEB4O15481 346 aaPredicted RBP14.56□□□□□ -0.08
SHKBP1-203ENST00000594298 ENSAO43768 121 aaKnown RBP14.56□□□□□ -0.08
SHKBP1-203ENST00000594298 FADS2O95864 444 aaKnown RBP14.56□□□□□ -0.08
SHKBP1-203ENST00000594298 CST4P01036 141 aa14.56□□□□□ -0.08
SHKBP1-203ENST00000594298 OMGP23515 440 aa14.56□□□□□ -0.08
SHKBP1-203ENST00000594298 NPY4RP50391 375 aa14.56□□□□□ -0.08
SHKBP1-203ENST00000594298 RIPPLY1Q0D2K3 151 aa14.56□□□□□ -0.08
SHKBP1-203ENST00000594298 KLHL22Q53GT1 634 aa14.56□□□□□ -0.08
SHKBP1-203ENST00000594298 OGFRL1Q5TC84 451 aaPredicted RBP14.56□□□□□ -0.08
SHKBP1-203ENST00000594298 GPR157Q5UAW9 335 aa14.56□□□□□ -0.08
SHKBP1-203ENST00000594298 LYPD2Q6UXB3 125 aa14.56□□□□□ -0.08
SHKBP1-203ENST00000594298 Q6YL49 198 aa14.56□□□□□ -0.08
SHKBP1-203ENST00000594298 THAP5Q7Z6K1 395 aa14.56□□□□□ -0.08
SHKBP1-203ENST00000594298 ELMOD2Q8IZ81 293 aa14.56□□□□□ -0.08
SHKBP1-203ENST00000594298 TMEM86BQ8N661 226 aa14.56□□□□□ -0.08
SHKBP1-203ENST00000594298 ACBD7Q8N6N7 88 aa14.56□□□□□ -0.08
SHKBP1-203ENST00000594298 OR4F5Q8NH21 305 aa14.56□□□□□ -0.08
SHKBP1-203ENST00000594298 OR51E1Q8TCB6 317 aa14.56□□□□□ -0.08
SHKBP1-203ENST00000594298 CYGBQ8WWM9 190 aa14.56□□□□□ -0.08
SHKBP1-203ENST00000594298 WFDC12Q8WWY7 111 aa14.56□□□□□ -0.08
SHKBP1-203ENST00000594298 ZDHHC16Q969W1 377 aa14.56□□□□□ -0.08
SHKBP1-203ENST00000594298 LYZL4Q96KX0 146 aa14.56□□□□□ -0.08
SHKBP1-203ENST00000594298 GPR84Q9NQS5 396 aa14.56□□□□□ -0.08
SHKBP1-203ENST00000594298 RNF7Q9UBF6 113 aa14.56□□□□□ -0.08
SHKBP1-203ENST00000594298 ZNF816-ZNF321PA0A0X1KG74 233 aa14.55□□□□□ -0.08
SHKBP1-203ENST00000594298 FAM181BA6NEQ2 426 aa14.55□□□□□ -0.08
SHKBP1-203ENST00000594298 C22orf46C9J442 243 aa14.55□□□□□ -0.08
SHKBP1-203ENST00000594298 DLGAP1O14490 977 aa14.55□□□□□ -0.08
SHKBP1-203ENST00000594298 SRSF10O75494 262 aaKnown RBP14.55□□□□□ -0.08
SHKBP1-203ENST00000594298 RPP14O95059 124 aaKnown RBP14.55□□□□□ -0.08
SHKBP1-203ENST00000594298 KNG1P01042 644 aa14.55□□□□□ -0.08
SHKBP1-203ENST00000594298 GRPP07492 148 aa14.55□□□□□ -0.08
SHKBP1-203ENST00000594298 DBTP11182 482 aaKnown RBP14.55□□□□□ -0.08
SHKBP1-203ENST00000594298 ZNF85Q03923 595 aa14.55□□□□□ -0.08
SHKBP1-203ENST00000594298 SLC34A1Q06495 639 aa14.55□□□□□ -0.08
SHKBP1-203ENST00000594298 RAB40BQ12829 278 aa14.55□□□□□ -0.08
SHKBP1-203ENST00000594298 IL18R1Q13478 541 aa14.55□□□□□ -0.08
SHKBP1-203ENST00000594298 ZNF684Q5T5D7 378 aa14.55□□□□□ -0.08
SHKBP1-203ENST00000594298 ZBTB37Q5TC79 503 aa14.55□□□□□ -0.08
SHKBP1-203ENST00000594298 PRAMEF6Q5VXH4 476 aa14.55□□□□□ -0.08
SHKBP1-203ENST00000594298 SSX6Q7RTT6 188 aa14.55□□□□□ -0.08
SHKBP1-203ENST00000594298 EGFL6Q8IUX8 553 aa14.55□□□□□ -0.08
SHKBP1-203ENST00000594298 CCDC54Q8NEL0 328 aa14.55□□□□□ -0.08
SHKBP1-203ENST00000594298 PIGCQ92535 297 aa14.55□□□□□ -0.08
SHKBP1-203ENST00000594298 LGALS12Q96DT0 336 aa14.55□□□□□ -0.08
SHKBP1-203ENST00000594298 ADI1Q9BV57 179 aa14.55□□□□□ -0.08
SHKBP1-203ENST00000594298 RTL8AQ9BWD3 113 aa14.55□□□□□ -0.08
SHKBP1-203ENST00000594298 BEX1Q9HBH7 125 aa14.55□□□□□ -0.08
SHKBP1-203ENST00000594298 UFSP2Q9NUQ7 469 aa14.55□□□□□ -0.08
SHKBP1-203ENST00000594298 GNG8Q9UK08 70 aa14.55□□□□□ -0.08
SHKBP1-203ENST00000594298 A6NLC8 198 aa14.54□□□□□ -0.08
SHKBP1-203ENST00000594298 ZNF850A8MQ14 1090 aa14.54□□□□□ -0.08
SHKBP1-203ENST00000594298 J3QRE1 110 aa14.54□□□□□ -0.08
SHKBP1-203ENST00000594298 TNFRSF13BO14836 293 aaPredicted RBP14.54□□□□□ -0.08
SHKBP1-203ENST00000594298 FAM20BO75063 409 aa14.54□□□□□ -0.08
SHKBP1-203ENST00000594298 DHRS3O75911 302 aa14.54□□□□□ -0.08
SHKBP1-203ENST00000594298 NDUFA7O95182 113 aa14.54□□□□□ -0.08
SHKBP1-203ENST00000594298 TTRP02766 147 aa14.54□□□□□ -0.08
SHKBP1-203ENST00000594298 LIPFP07098 398 aa14.54□□□□□ -0.08
SHKBP1-203ENST00000594298 RAG2P55895 527 aa14.54□□□□□ -0.08
SHKBP1-203ENST00000594298 ACTA2P62736 377 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms