RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 CDK2P24941 298 aa17.83■□□□□ 0.44
PNKP-203ENST00000593946 ZP1P60852 638 aa17.83■□□□□ 0.44
PNKP-203ENST00000593946 PSG7Q13046 419 aa17.83■□□□□ 0.44
PNKP-203ENST00000593946 UNC119Q13432 240 aa17.83■□□□□ 0.44
PNKP-203ENST00000593946 CEACAM21Q3KPI0 293 aa17.83■□□□□ 0.44
PNKP-203ENST00000593946 TMEM255AQ5JRV8 349 aa17.83■□□□□ 0.44
PNKP-203ENST00000593946 OR10K2Q6IF99 312 aa17.83■□□□□ 0.44
PNKP-203ENST00000593946 PYHIN1Q6K0P9 492 aa17.83■□□□□ 0.44
PNKP-203ENST00000593946 OR5D18Q8NGL1 313 aa17.83■□□□□ 0.44
PNKP-203ENST00000593946 HPSE2Q8WWQ2 592 aa17.83■□□□□ 0.44
PNKP-203ENST00000593946 ABHD1Q96SE0 405 aa17.83■□□□□ 0.44
PNKP-203ENST00000593946 ABCB10Q9NRK6 738 aa17.83■□□□□ 0.44
PNKP-203ENST00000593946 MRPL15Q9P015 296 aaKnown RBP17.83■□□□□ 0.44
PNKP-203ENST00000593946 TMEM14DPA8MWL7 114 aa17.82■□□□□ 0.44
PNKP-203ENST00000593946 IQCF6A8MYZ5 107 aa17.82■□□□□ 0.44
PNKP-203ENST00000593946 SELEP16581 610 aa17.82■□□□□ 0.44
PNKP-203ENST00000593946 CD40P25942 277 aa17.82■□□□□ 0.44
PNKP-203ENST00000593946 MPV17P39210 176 aa17.82■□□□□ 0.44
PNKP-203ENST00000593946 MMP15P51511 669 aa17.82■□□□□ 0.44
PNKP-203ENST00000593946 BAK1Q16611 211 aa17.82■□□□□ 0.44
PNKP-203ENST00000593946 TNFAIP8L1Q8WVP5 186 aa17.82■□□□□ 0.44
PNKP-203ENST00000593946 FGF23Q9GZV9 251 aaPredicted RBP17.82■□□□□ 0.44
PNKP-203ENST00000593946 C14orf119Q9NWQ9 140 aa17.82■□□□□ 0.44
PNKP-203ENST00000593946 RABL2AQ9UBK7 228 aaPredicted RBP17.82■□□□□ 0.44
PNKP-203ENST00000593946 GHRLQ9UBU3 117 aa17.82■□□□□ 0.44
PNKP-203ENST00000593946 ERRFI1Q9UJM3 462 aaPredicted RBP17.82■□□□□ 0.44
PNKP-203ENST00000593946 RABL2BQ9UNT1 228 aa17.82■□□□□ 0.44
PNKP-203ENST00000593946 MPC1Q9Y5U8 109 aa17.82■□□□□ 0.44
PNKP-203ENST00000593946 ATP1B3P54709 279 aa17.81■□□□□ 0.44
PNKP-203ENST00000593946 TLE1Q04724 770 aa17.81■□□□□ 0.44
PNKP-203ENST00000593946 MBNL2Q5VZF2 373 aaKnown RBP17.81■□□□□ 0.44
PNKP-203ENST00000593946 STEAP3Q658P3 488 aa17.81■□□□□ 0.44
PNKP-203ENST00000593946 OR2W3Q7Z3T1 314 aa17.81■□□□□ 0.44
PNKP-203ENST00000593946 C1QL2Q7Z5L3 287 aa17.81■□□□□ 0.44
PNKP-203ENST00000593946 LYSMD2Q8IV50 215 aa17.81■□□□□ 0.44
PNKP-203ENST00000593946 OR8H2Q8N162 312 aa17.81■□□□□ 0.44
PNKP-203ENST00000593946 Q8N402 240 aa17.81■□□□□ 0.44
PNKP-203ENST00000593946 PRR7Q8TB68 274 aa17.81■□□□□ 0.44
PNKP-203ENST00000593946 RNASE6Q93091 150 aaKnown RBP17.81■□□□□ 0.44
PNKP-203ENST00000593946 ITPKCQ96DU7 683 aa17.81■□□□□ 0.44
PNKP-203ENST00000593946 MYEF2Q9P2K5 600 aaKnown RBP17.81■□□□□ 0.44
PNKP-203ENST00000593946 RAB22AQ9UL26 194 aa17.81■□□□□ 0.44
PNKP-203ENST00000593946 HCFC1P51610 2035 aa17.81■□□□□ 0.44
PNKP-203ENST00000593946 PQLC2LA1A4F0 135 aa17.81■□□□□ 0.44
PNKP-203ENST00000593946 NKX2-6A6NCS4 301 aa17.81■□□□□ 0.44
PNKP-203ENST00000593946 CSF3P09919 207 aa17.81■□□□□ 0.44
PNKP-203ENST00000593946 MNDAP41218 407 aa17.81■□□□□ 0.44
PNKP-203ENST00000593946 UQCRFS1P47985 274 aa17.81■□□□□ 0.44
PNKP-203ENST00000593946 NKX6-1P78426 367 aaPredicted RBP17.81■□□□□ 0.44
PNKP-203ENST00000593946 SNTB2Q13425 540 aaKnown RBP17.81■□□□□ 0.44
PNKP-203ENST00000593946 CDSNQ15517 529 aa17.81■□□□□ 0.44
PNKP-203ENST00000593946 ALKBH6Q3KRA9 238 aa17.81■□□□□ 0.44
PNKP-203ENST00000593946 ZNF718Q3SXZ3 478 aa17.81■□□□□ 0.44
PNKP-203ENST00000593946 TMEM108Q6UXF1 575 aa17.81■□□□□ 0.44
PNKP-203ENST00000593946 WFDC8Q8IUA0 241 aa17.81■□□□□ 0.44
PNKP-203ENST00000593946 IZUMO1Q8IYV9 350 aa17.81■□□□□ 0.44
PNKP-203ENST00000593946 ZC3HAV1LQ96H79 300 aaKnown RBP17.81■□□□□ 0.44
PNKP-203ENST00000593946 WFIKKN1Q96NZ8 548 aa17.81■□□□□ 0.44
PNKP-203ENST00000593946 SPEF1Q9Y4P9 236 aa17.81■□□□□ 0.44
PNKP-203ENST00000593946 XRCC3O43542 346 aa17.8■□□□□ 0.44
PNKP-203ENST00000593946 TPPPO94811 219 aa17.8■□□□□ 0.44
PNKP-203ENST00000593946 IL7P13232 177 aa17.8■□□□□ 0.44
PNKP-203ENST00000593946 KITLGP21583 273 aa17.8■□□□□ 0.44
PNKP-203ENST00000593946 GNLYP22749 145 aa17.8■□□□□ 0.44
PNKP-203ENST00000593946 PTH2RP49190 550 aa17.8■□□□□ 0.44
PNKP-203ENST00000593946 C4orf17Q53FE4 359 aa17.8■□□□□ 0.44
PNKP-203ENST00000593946 TMEM69Q5SWH9 247 aa17.8■□□□□ 0.44
PNKP-203ENST00000593946 MTFR2Q6P444 385 aa17.8■□□□□ 0.44
PNKP-203ENST00000593946 OR5A2Q8NGI9 324 aa17.8■□□□□ 0.44
PNKP-203ENST00000593946 KCNG3Q8TAE7 436 aa17.8■□□□□ 0.44
PNKP-203ENST00000593946 CA5BP1Q8WTZ4 195 aa17.8■□□□□ 0.44
PNKP-203ENST00000593946 OR5P3Q8WZ94 311 aa17.8■□□□□ 0.44
PNKP-203ENST00000593946 DVL3Q92997 716 aaPredicted RBP17.8■□□□□ 0.44
PNKP-203ENST00000593946 PURGQ9UJV8 347 aaKnown RBP17.8■□□□□ 0.44
PNKP-203ENST00000593946 ANKHD1Q8IWZ3 2542 aaKnown RBP17.79■□□□□ 0.44
PNKP-203ENST00000593946 ATP6V1G2-DDX39BF2Z307 99 aa17.79■□□□□ 0.44
PNKP-203ENST00000593946 KDM4BO94953 1096 aa17.79■□□□□ 0.44
PNKP-203ENST00000593946 CA6P23280 308 aa17.79■□□□□ 0.44
PNKP-203ENST00000593946 PTAFRP25105 342 aa17.79■□□□□ 0.44
PNKP-203ENST00000593946 PITPNAQ00169 270 aa17.79■□□□□ 0.44
PNKP-203ENST00000593946 IGFBP7Q16270 282 aa17.79■□□□□ 0.44
PNKP-203ENST00000593946 TMEM104Q8NE00 496 aa17.79■□□□□ 0.44
PNKP-203ENST00000593946 FAM46BQ96A09 425 aa17.79■□□□□ 0.44
PNKP-203ENST00000593946 ATG5Q9H1Y0 275 aa17.79■□□□□ 0.44
PNKP-203ENST00000593946 DIABLOQ9NR28 239 aa17.79■□□□□ 0.44
PNKP-203ENST00000593946 MRPS7Q9Y2R9 242 aaKnown RBP17.79■□□□□ 0.44
PNKP-203ENST00000593946 HLA-DQB1P01920 261 aa17.78■□□□□ 0.44
PNKP-203ENST00000593946 TMEM225BP0DP42 221 aa17.78■□□□□ 0.44
PNKP-203ENST00000593946 GLRXP35754 106 aa17.78■□□□□ 0.44
PNKP-203ENST00000593946 GPM6AP51674 278 aa17.78■□□□□ 0.44
PNKP-203ENST00000593946 SLC22A6Q4U2R8 563 aa17.78■□□□□ 0.44
PNKP-203ENST00000593946 RGS7BPQ6MZT1 257 aaPredicted RBP17.78■□□□□ 0.44
PNKP-203ENST00000593946 ASCL4Q6XD76 172 aa17.78■□□□□ 0.44
PNKP-203ENST00000593946 HIST1H2AAQ96QV6 131 aa17.78■□□□□ 0.44
PNKP-203ENST00000593946 ING4Q9UNL4 249 aa17.78■□□□□ 0.44
PNKP-203ENST00000593946 SPTBN1Q01082 2364 aaKnown RBP17.78■□□□□ 0.44
PNKP-203ENST00000593946 A0A0A6YYH2 397 aa17.78■□□□□ 0.44
PNKP-203ENST00000593946 ISPDA4D126 451 aa17.78■□□□□ 0.44
PNKP-203ENST00000593946 A6NJ64 397 aa17.78■□□□□ 0.44
PNKP-203ENST00000593946 OR5B21A6NL26 309 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms