RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 LZICQ8WZA0 190 aa4.62□□□□□ -1.67
DNMT1-220ENST00000589351 BPIFA2Q96DR5 249 aa4.62□□□□□ -1.67
DNMT1-220ENST00000589351 SIGLEC11Q96RL6 698 aa4.62□□□□□ -1.67
DNMT1-220ENST00000589351 CGREF1Q99674 301 aa4.62□□□□□ -1.67
DNMT1-220ENST00000589351 RBM4BQ9BQ04 359 aaKnown RBP4.62□□□□□ -1.67
DNMT1-220ENST00000589351 ECSITQ9BQ95 431 aa4.62□□□□□ -1.67
DNMT1-220ENST00000589351 PRSS27Q9BQR3 290 aa4.62□□□□□ -1.67
DNMT1-220ENST00000589351 TMEM246Q9BRR3 403 aa4.62□□□□□ -1.67
DNMT1-220ENST00000589351 PCGF1Q9BSM1 259 aa4.62□□□□□ -1.67
DNMT1-220ENST00000589351 ABHD6Q9BV23 337 aa4.62□□□□□ -1.67
DNMT1-220ENST00000589351 TPPP3Q9BW30 176 aa4.62□□□□□ -1.67
DNMT1-220ENST00000589351 HCAR1Q9BXC0 346 aa4.62□□□□□ -1.67
DNMT1-220ENST00000589351 CHIAQ9BZP6 476 aa4.62□□□□□ -1.67
DNMT1-220ENST00000589351 MARCH7Q9H992 704 aa4.62□□□□□ -1.67
DNMT1-220ENST00000589351 ACOXLQ9NUZ1 547 aa4.62□□□□□ -1.67
DNMT1-220ENST00000589351 TMEM100Q9NV29 134 aa4.62□□□□□ -1.67
DNMT1-220ENST00000589351 C1RLQ9NZP8 487 aa4.62□□□□□ -1.67
DNMT1-220ENST00000589351 PDP1Q9P0J1 537 aaPredicted RBP4.62□□□□□ -1.67
DNMT1-220ENST00000589351 PEMTQ9UBM1 199 aa4.62□□□□□ -1.67
DNMT1-220ENST00000589351 FAM96BQ9Y3D0 163 aa4.62□□□□□ -1.67
DNMT1-220ENST00000589351 UGT2A1Q9Y4X1 527 aa4.62□□□□□ -1.67
DNMT1-220ENST00000589351 TRBV5-3A0A0A0MS03 114 aa4.61□□□□□ -1.67
DNMT1-220ENST00000589351 FAM230AA0A1W2PPH8 454 aa4.61□□□□□ -1.67
DNMT1-220ENST00000589351 A0A1W2PRX2 142 aa4.61□□□□□ -1.67
DNMT1-220ENST00000589351 OR6C6A6NF89 314 aa4.61□□□□□ -1.67
DNMT1-220ENST00000589351 ZNF879B4DU55 563 aa4.61□□□□□ -1.67
DNMT1-220ENST00000589351 TNFRSF13BO14836 293 aaPredicted RBP4.61□□□□□ -1.67
DNMT1-220ENST00000589351 SELENOFO60613 162 aa4.61□□□□□ -1.67
DNMT1-220ENST00000589351 CLPXO76031 633 aa4.61□□□□□ -1.67
DNMT1-220ENST00000589351 LYPD3O95274 346 aa4.61□□□□□ -1.67
DNMT1-220ENST00000589351 ECDO95905 644 aaPredicted RBP4.61□□□□□ -1.67
DNMT1-220ENST00000589351 CYB5R3P00387 301 aaPredicted RBP4.61□□□□□ -1.67
DNMT1-220ENST00000589351 THY1P04216 161 aa4.61□□□□□ -1.67
DNMT1-220ENST00000589351 MELTFP08582 738 aa4.61□□□□□ -1.67
DNMT1-220ENST00000589351 TSPAN19P0C672 248 aa4.61□□□□□ -1.67
DNMT1-220ENST00000589351 IFI30P13284 250 aa4.61□□□□□ -1.67
DNMT1-220ENST00000589351 MMP9P14780 707 aa4.61□□□□□ -1.67
DNMT1-220ENST00000589351 FPR3P25089 353 aa4.61□□□□□ -1.67
DNMT1-220ENST00000589351 BMI1P35226 326 aa4.61□□□□□ -1.67
DNMT1-220ENST00000589351 RPL4P36578 427 aaKnown RBP4.61□□□□□ -1.67
DNMT1-220ENST00000589351 SLC9A3P48764 834 aa4.61□□□□□ -1.67
DNMT1-220ENST00000589351 F2RL1P55085 397 aa4.61□□□□□ -1.67
DNMT1-220ENST00000589351 MAGOHP61326 146 aaKnown RBP4.61□□□□□ -1.67
DNMT1-220ENST00000589351 FGF12P61328 243 aa4.61□□□□□ -1.67
DNMT1-220ENST00000589351 LSM6P62312 80 aaKnown RBP4.61□□□□□ -1.67
DNMT1-220ENST00000589351 SRSF4Q08170 494 aaKnown RBP4.61□□□□□ -1.67
DNMT1-220ENST00000589351 AQP6Q13520 282 aa4.61□□□□□ -1.67
DNMT1-220ENST00000589351 ZNF404Q494X3 552 aa4.61□□□□□ -1.67
DNMT1-220ENST00000589351 SPRNQ5BIV9 151 aa4.61□□□□□ -1.67
DNMT1-220ENST00000589351 WDR25Q64LD2 544 aaPredicted RBP4.61□□□□□ -1.67
DNMT1-220ENST00000589351 ASPHD2Q6ICH7 369 aa4.61□□□□□ -1.67
DNMT1-220ENST00000589351 OR2T2Q6IF00 324 aa4.61□□□□□ -1.67
DNMT1-220ENST00000589351 ERICH5Q6P6B1 374 aa4.61□□□□□ -1.67
DNMT1-220ENST00000589351 DLEU7Q6UYE1 221 aa4.61□□□□□ -1.67
DNMT1-220ENST00000589351 Q6ZR03 302 aa4.61□□□□□ -1.67
DNMT1-220ENST00000589351 FOXL2NBQ6ZUU3 175 aa4.61□□□□□ -1.67
DNMT1-220ENST00000589351 CENPVQ7Z7K6 275 aaPredicted RBP4.61□□□□□ -1.67
DNMT1-220ENST00000589351 DHDDSQ86SQ9 333 aa4.61□□□□□ -1.67
DNMT1-220ENST00000589351 OAFQ86UD1 273 aa4.61□□□□□ -1.67
DNMT1-220ENST00000589351 RNF113BQ8IZP6 322 aaKnown RBP4.61□□□□□ -1.67
DNMT1-220ENST00000589351 OR5AS1Q8N127 324 aa4.61□□□□□ -1.67
DNMT1-220ENST00000589351 C10orf111Q8N326 155 aa4.61□□□□□ -1.67
DNMT1-220ENST00000589351 FITM2Q8N6M3 262 aa4.61□□□□□ -1.67
DNMT1-220ENST00000589351 GJC3Q8NFK1 279 aa4.61□□□□□ -1.67
DNMT1-220ENST00000589351 GPR32P1Q8NGA4 272 aa4.61□□□□□ -1.67
DNMT1-220ENST00000589351 OR8J1Q8NGP2 316 aa4.61□□□□□ -1.67
DNMT1-220ENST00000589351 OR10A6Q8NH74 314 aa4.61□□□□□ -1.67
DNMT1-220ENST00000589351 PFN4Q8NHR9 129 aa4.61□□□□□ -1.67
DNMT1-220ENST00000589351 ZNF420Q8TAQ5 688 aaPredicted RBP4.61□□□□□ -1.67
DNMT1-220ENST00000589351 FAM110DQ8TAY7 271 aaPredicted RBP4.61□□□□□ -1.67
DNMT1-220ENST00000589351 NPRL2Q8WTW4 380 aa4.61□□□□□ -1.67
DNMT1-220ENST00000589351 DYDC1Q8WWB3 177 aa4.61□□□□□ -1.67
DNMT1-220ENST00000589351 APOBEC3DQ96AK3 386 aaPredicted RBP4.61□□□□□ -1.67
DNMT1-220ENST00000589351 TECTBQ96PL2 329 aa4.61□□□□□ -1.67
DNMT1-220ENST00000589351 CPPED1Q9BRF8 314 aaPredicted RBP4.61□□□□□ -1.67
DNMT1-220ENST00000589351 GON7Q9BXV9 100 aa4.61□□□□□ -1.67
DNMT1-220ENST00000589351 PARD6BQ9BYG5 372 aa4.61□□□□□ -1.67
DNMT1-220ENST00000589351 SLC22A4Q9H015 551 aa4.61□□□□□ -1.67
DNMT1-220ENST00000589351 IKZF5Q9H5V7 419 aa4.61□□□□□ -1.67
DNMT1-220ENST00000589351 KAT8Q9H7Z6 458 aaKnown RBP4.61□□□□□ -1.67
DNMT1-220ENST00000589351 POLE4Q9NR33 117 aa4.61□□□□□ -1.67
DNMT1-220ENST00000589351 ATPIF1Q9UII2 106 aa4.61□□□□□ -1.67
DNMT1-220ENST00000589351 COMMD3-BMI1R4GMX3 469 aa4.61□□□□□ -1.67
DNMT1-220ENST00000589351 TGP01266 2768 aa4.6□□□□□ -1.67
DNMT1-220ENST00000589351 IGKV1D-43A0A0B4J1Z2 117 aa4.6□□□□□ -1.67
DNMT1-220ENST00000589351 TRAV38-1A0A0B4J264 116 aa4.6□□□□□ -1.67
DNMT1-220ENST00000589351 TRBV2A0A0J9YWF9 115 aa4.6□□□□□ -1.67
DNMT1-220ENST00000589351 LOC100653049A0A140TA62 436 aa4.6□□□□□ -1.67
DNMT1-220ENST00000589351 MDFIC2A0A1B0GVS7 189 aa4.6□□□□□ -1.67
DNMT1-220ENST00000589351 C5orf63A6NC05 138 aa4.6□□□□□ -1.67
DNMT1-220ENST00000589351 IQCF6A8MYZ5 107 aa4.6□□□□□ -1.67
DNMT1-220ENST00000589351 EFCAB9A8MZ26 197 aa4.6□□□□□ -1.67
DNMT1-220ENST00000589351 PSMD9O00233 223 aa4.6□□□□□ -1.67
DNMT1-220ENST00000589351 FBP2O00757 339 aa4.6□□□□□ -1.67
DNMT1-220ENST00000589351 GPR137BO60478 399 aa4.6□□□□□ -1.67
DNMT1-220ENST00000589351 KHDRBS3O75525 346 aaKnown RBP4.6□□□□□ -1.67
DNMT1-220ENST00000589351 SCGB2A1O75556 95 aa4.6□□□□□ -1.67
DNMT1-220ENST00000589351 KRT34O76011 436 aa4.6□□□□□ -1.67
DNMT1-220ENST00000589351 FBP1P09467 338 aa4.6□□□□□ -1.67
DNMT1-220ENST00000589351 STAG3L3P0CL85 134 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms