RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 ISG15P05161 165 aa8.45□□□□□ -1.06
TPM4-207ENST00000588032 FAHP16930 419 aa8.45□□□□□ -1.06
TPM4-207ENST00000588032 ZFP36P26651 326 aaKnown RBP8.45□□□□□ -1.06
TPM4-207ENST00000588032 DCKP27707 260 aa8.45□□□□□ -1.06
TPM4-207ENST00000588032 SRP14P37108 136 aaKnown RBP8.45□□□□□ -1.06
TPM4-207ENST00000588032 PSMB10P40306 273 aa8.45□□□□□ -1.06
TPM4-207ENST00000588032 OR12D2P58182 307 aa8.45□□□□□ -1.06
TPM4-207ENST00000588032 GNB2P62879 340 aa8.45□□□□□ -1.06
TPM4-207ENST00000588032 LCN2P80188 198 aa8.45□□□□□ -1.06
TPM4-207ENST00000588032 WDR38Q5JTN6 314 aa8.45□□□□□ -1.06
TPM4-207ENST00000588032 FAM201AQ5SY85 155 aa8.45□□□□□ -1.06
TPM4-207ENST00000588032 SFRP4Q6FHJ7 346 aaPredicted RBP8.45□□□□□ -1.06
TPM4-207ENST00000588032 MOB3CQ70IA8 216 aa8.45□□□□□ -1.06
TPM4-207ENST00000588032 ZNF771Q7L3S4 317 aaPredicted RBP8.45□□□□□ -1.06
TPM4-207ENST00000588032 BOLLQ8N9W6 283 aaKnown RBP8.45□□□□□ -1.06
TPM4-207ENST00000588032 SCCPDHQ8NBX0 429 aa8.45□□□□□ -1.06
TPM4-207ENST00000588032 DEFB108BQ8NET1 73 aa8.45□□□□□ -1.06
TPM4-207ENST00000588032 OR2G2Q8NGZ5 317 aa8.45□□□□□ -1.06
TPM4-207ENST00000588032 LRRC29Q8WV35 223 aa8.45□□□□□ -1.06
TPM4-207ENST00000588032 APH1BQ8WW43 257 aa8.45□□□□□ -1.06
TPM4-207ENST00000588032 HPSE2Q8WWQ2 592 aa8.45□□□□□ -1.06
TPM4-207ENST00000588032 TECTBQ96PL2 329 aa8.45□□□□□ -1.06
TPM4-207ENST00000588032 ALG8Q9BVK2 526 aa8.45□□□□□ -1.06
TPM4-207ENST00000588032 JAM3Q9BX67 310 aa8.45□□□□□ -1.06
TPM4-207ENST00000588032 OR51I2Q9H344 312 aa8.45□□□□□ -1.06
TPM4-207ENST00000588032 PPP1R3EQ9H7J1 279 aa8.45□□□□□ -1.06
TPM4-207ENST00000588032 PLEKHA1Q9HB21 404 aa8.45□□□□□ -1.06
TPM4-207ENST00000588032 AMBNQ9NP70 447 aa8.45□□□□□ -1.06
TPM4-207ENST00000588032 FGF20Q9NP95 211 aaPredicted RBP8.45□□□□□ -1.06
TPM4-207ENST00000588032 ACOXLQ9NUZ1 547 aa8.45□□□□□ -1.06
TPM4-207ENST00000588032 ERVK13-1Q9NX77 482 aa8.45□□□□□ -1.06
TPM4-207ENST00000588032 FRRS1LQ9P0K9 344 aa8.45□□□□□ -1.06
TPM4-207ENST00000588032 ERVK-18Q9QC07 812 aa8.45□□□□□ -1.06
TPM4-207ENST00000588032 OR5V1Q9UGF6 321 aa8.45□□□□□ -1.06
TPM4-207ENST00000588032 MYRFQ9Y2G1 1151 aa8.45□□□□□ -1.06
TPM4-207ENST00000588032 FN1P02751 2386 aaKnown RBP8.45□□□□□ -1.06
TPM4-207ENST00000588032 MTORP42345 2549 aa8.45□□□□□ -1.06
TPM4-207ENST00000588032 ERICH4A6NGS2 130 aa8.44□□□□□ -1.06
TPM4-207ENST00000588032 SRRM5B3KS81 715 aa8.44□□□□□ -1.06
TPM4-207ENST00000588032 C3orf80F5H4A9 247 aa8.44□□□□□ -1.06
TPM4-207ENST00000588032 J3QLW9 94 aa8.44□□□□□ -1.06
TPM4-207ENST00000588032 HTR1AP08908 422 aa8.44□□□□□ -1.06
TPM4-207ENST00000588032 ZNF19P17023 458 aa8.44□□□□□ -1.06
TPM4-207ENST00000588032 RBMXP38159 391 aaKnown RBP8.44□□□□□ -1.06
TPM4-207ENST00000588032 CAPGP40121 348 aa8.44□□□□□ -1.06
TPM4-207ENST00000588032 PITPNBP48739 271 aa8.44□□□□□ -1.06
TPM4-207ENST00000588032 GPM6AP51674 278 aa8.44□□□□□ -1.06
TPM4-207ENST00000588032 CSNK2BP67870 215 aa8.44□□□□□ -1.06
TPM4-207ENST00000588032 HNRNPA0Q13151 305 aaKnown RBP8.44□□□□□ -1.06
TPM4-207ENST00000588032 MED21Q13503 144 aa8.44□□□□□ -1.06
TPM4-207ENST00000588032 CEP78Q5JTW2 689 aa8.44□□□□□ -1.06
TPM4-207ENST00000588032 CD276Q5ZPR3 534 aa8.44□□□□□ -1.06
TPM4-207ENST00000588032 PLCXD3Q63HM9 321 aa8.44□□□□□ -1.06
TPM4-207ENST00000588032 BTNL3Q6UXE8 466 aa8.44□□□□□ -1.06
TPM4-207ENST00000588032 LHFPL3Q86UP9 236 aa8.44□□□□□ -1.06
TPM4-207ENST00000588032 PRIMA1Q86XR5 153 aa8.44□□□□□ -1.06
TPM4-207ENST00000588032 ZNF573Q86YE8 665 aa8.44□□□□□ -1.06
TPM4-207ENST00000588032 C8orf59Q8N0T1 100 aaPredicted RBP8.44□□□□□ -1.06
TPM4-207ENST00000588032 PRSS35Q8N3Z0 413 aa8.44□□□□□ -1.06
TPM4-207ENST00000588032 OR52I1Q8NGK6 324 aa8.44□□□□□ -1.06
TPM4-207ENST00000588032 NANPQ8TBE9 248 aa8.44□□□□□ -1.06
TPM4-207ENST00000588032 PP6455Q8WZ26 134 aa8.44□□□□□ -1.06
TPM4-207ENST00000588032 PELI1Q96FA3 418 aa8.44□□□□□ -1.06
TPM4-207ENST00000588032 C4orf36Q96KX1 117 aa8.44□□□□□ -1.06
TPM4-207ENST00000588032 DNTTIP1Q9H147 329 aa8.44□□□□□ -1.06
TPM4-207ENST00000588032 C7orf69Q9H7B7 122 aa8.44□□□□□ -1.06
TPM4-207ENST00000588032 RASL12Q9NYN1 266 aa8.44□□□□□ -1.06
TPM4-207ENST00000588032 KAAG1Q9UBP8 84 aa8.44□□□□□ -1.06
TPM4-207ENST00000588032 CLN8Q9UBY8 286 aa8.44□□□□□ -1.06
TPM4-207ENST00000588032 SLC7A11Q9UPY5 501 aa8.44□□□□□ -1.06
TPM4-207ENST00000588032 VPS13CQ709C8 3753 aa8.43□□□□□ -1.06
TPM4-207ENST00000588032 ANKRD61A6NGH8 418 aa8.43□□□□□ -1.06
TPM4-207ENST00000588032 KIAA1324LA8MWY0 1029 aaPredicted RBP8.43□□□□□ -1.06
TPM4-207ENST00000588032 TRAPPC2LH3BP13 241 aa8.43□□□□□ -1.06
TPM4-207ENST00000588032 GPR37O15354 613 aa8.43□□□□□ -1.06
TPM4-207ENST00000588032 PHF1O43189 567 aaPredicted RBP8.43□□□□□ -1.06
TPM4-207ENST00000588032 ADAM20O43506 726 aa8.43□□□□□ -1.06
TPM4-207ENST00000588032 GATBO75879 557 aaKnown RBP8.43□□□□□ -1.06
TPM4-207ENST00000588032 CLIC3O95833 236 aa8.43□□□□□ -1.06
TPM4-207ENST00000588032 ECDO95905 644 aaPredicted RBP8.43□□□□□ -1.06
TPM4-207ENST00000588032 LIPFP07098 398 aa8.43□□□□□ -1.06
TPM4-207ENST00000588032 ACAA1P09110 424 aaPredicted RBP8.43□□□□□ -1.06
TPM4-207ENST00000588032 CD80P33681 288 aa8.43□□□□□ -1.06
TPM4-207ENST00000588032 KIR3DL2P43630 455 aa8.43□□□□□ -1.06
TPM4-207ENST00000588032 GBX2P52951 348 aaPredicted RBP8.43□□□□□ -1.06
TPM4-207ENST00000588032 SEC61A1P61619 476 aaKnown RBP8.43□□□□□ -1.06
TPM4-207ENST00000588032 ALKBH1Q13686 389 aaKnown RBP8.43□□□□□ -1.06
TPM4-207ENST00000588032 SMN1Q16637 294 aaKnown RBP8.43□□□□□ -1.06
TPM4-207ENST00000588032 ODF4Q2M2E3 257 aa8.43□□□□□ -1.06
TPM4-207ENST00000588032 ATPAF1Q5TC12 328 aaPredicted RBP8.43□□□□□ -1.06
TPM4-207ENST00000588032 WDR25Q64LD2 544 aaPredicted RBP8.43□□□□□ -1.06
TPM4-207ENST00000588032 LYPD2Q6UXB3 125 aa8.43□□□□□ -1.06
TPM4-207ENST00000588032 TMPRSS11AQ6ZMR5 421 aa8.43□□□□□ -1.06
TPM4-207ENST00000588032 ZNF841Q6ZN19 808 aa8.43□□□□□ -1.06
TPM4-207ENST00000588032 SLC36A1Q7Z2H8 476 aa8.43□□□□□ -1.06
TPM4-207ENST00000588032 FAM90A1Q86YD7 464 aa8.43□□□□□ -1.06
TPM4-207ENST00000588032 C19orf18Q8NEA5 215 aa8.43□□□□□ -1.06
TPM4-207ENST00000588032 CNIH3Q8TBE1 160 aa8.43□□□□□ -1.06
TPM4-207ENST00000588032 RAB40AQ8WXH6 277 aa8.43□□□□□ -1.06
TPM4-207ENST00000588032 RPL3LQ92901 407 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms