RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 TNFRSF19Q9NS68 423 aa10.53□□□□□ -0.72
NPLOC4-213ENST00000573519 SNTG1Q9NSN8 517 aa10.53□□□□□ -0.72
NPLOC4-213ENST00000573519 DUX4Q9UBX2 424 aa10.53□□□□□ -0.72
NPLOC4-213ENST00000573519 A0A0U1RQV5 110 aa10.52□□□□□ -0.73
NPLOC4-213ENST00000573519 ZNF816-ZNF321PA0A0X1KG74 233 aa10.52□□□□□ -0.73
NPLOC4-213ENST00000573519 ACOD1A6NK06 481 aa10.52□□□□□ -0.73
NPLOC4-213ENST00000573519 SRRM5B3KS81 715 aa10.52□□□□□ -0.73
NPLOC4-213ENST00000573519 ZNF670-ZNF695F2Z2N8 137 aa10.52□□□□□ -0.73
NPLOC4-213ENST00000573519 P2RY10O00398 339 aa10.52□□□□□ -0.73
NPLOC4-213ENST00000573519 AKR7A2O43488 359 aa10.52□□□□□ -0.73
NPLOC4-213ENST00000573519 NDUFB3O43676 98 aa10.52□□□□□ -0.73
NPLOC4-213ENST00000573519 ZNF254O75437 659 aa10.52□□□□□ -0.73
NPLOC4-213ENST00000573519 ECDO95905 644 aaPredicted RBP10.52□□□□□ -0.73
NPLOC4-213ENST00000573519 ALDH3A2P51648 485 aa10.52□□□□□ -0.73
NPLOC4-213ENST00000573519 GPM6AP51674 278 aa10.52□□□□□ -0.73
NPLOC4-213ENST00000573519 ARF6P62330 175 aa10.52□□□□□ -0.73
NPLOC4-213ENST00000573519 ROM1Q03395 351 aa10.52□□□□□ -0.73
NPLOC4-213ENST00000573519 MFGE8Q08431 387 aaPredicted RBP10.52□□□□□ -0.73
NPLOC4-213ENST00000573519 SLC9A3R2Q15599 337 aa10.52□□□□□ -0.73
NPLOC4-213ENST00000573519 DEFB112Q30KQ8 113 aa10.52□□□□□ -0.73
NPLOC4-213ENST00000573519 AWAT1Q58HT5 328 aa10.52□□□□□ -0.73
NPLOC4-213ENST00000573519 DMRTC1Q5HYR2 192 aa10.52□□□□□ -0.73
NPLOC4-213ENST00000573519 ZNF322Q6U7Q0 402 aaPredicted RBP10.52□□□□□ -0.73
NPLOC4-213ENST00000573519 PLEKHG7Q6ZR37 379 aa10.52□□□□□ -0.73
NPLOC4-213ENST00000573519 C9orf139Q6ZV77 190 aa10.52□□□□□ -0.73
NPLOC4-213ENST00000573519 MOB3CQ70IA8 216 aa10.52□□□□□ -0.73
NPLOC4-213ENST00000573519 GID4Q8IVV7 300 aa10.52□□□□□ -0.73
NPLOC4-213ENST00000573519 C10orf67Q8IYJ2 551 aa10.52□□□□□ -0.73
NPLOC4-213ENST00000573519 HPSE2Q8WWQ2 592 aa10.52□□□□□ -0.73
NPLOC4-213ENST00000573519 LHX4Q969G2 390 aa10.52□□□□□ -0.73
NPLOC4-213ENST00000573519 WDFY2Q96P53 400 aa10.52□□□□□ -0.73
NPLOC4-213ENST00000573519 SLC29A1Q99808 456 aa10.52□□□□□ -0.73
NPLOC4-213ENST00000573519 FGF23Q9GZV9 251 aaPredicted RBP10.52□□□□□ -0.73
NPLOC4-213ENST00000573519 WDR13Q9H1Z4 485 aa10.52□□□□□ -0.73
NPLOC4-213ENST00000573519 GPR84Q9NQS5 396 aa10.52□□□□□ -0.73
NPLOC4-213ENST00000573519 USE1Q9NZ43 259 aa10.52□□□□□ -0.73
NPLOC4-213ENST00000573519 ONECUT1Q9UBC0 465 aa10.52□□□□□ -0.73
NPLOC4-213ENST00000573519 KAAG1Q9UBP8 84 aa10.52□□□□□ -0.73
NPLOC4-213ENST00000573519 WARS2Q9UGM6 360 aaKnown RBP10.52□□□□□ -0.73
NPLOC4-213ENST00000573519 ORC6Q9Y5N6 252 aa10.52□□□□□ -0.73
NPLOC4-213ENST00000573519 NKX6-3A6NJ46 265 aa10.51□□□□□ -0.73
NPLOC4-213ENST00000573519 ZNF732B4DXR9 585 aa10.51□□□□□ -0.73
NPLOC4-213ENST00000573519 LOC110117498-PIK3R3F6TDL0 507 aa10.51□□□□□ -0.73
NPLOC4-213ENST00000573519 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.51□□□□□ -0.73
NPLOC4-213ENST00000573519 HOXA3O43365 443 aaPredicted RBP10.51□□□□□ -0.73
NPLOC4-213ENST00000573519 FCN3O75636 299 aa10.51□□□□□ -0.73
NPLOC4-213ENST00000573519 BAG2O95816 211 aa10.51□□□□□ -0.73
NPLOC4-213ENST00000573519 TFF1P04155 84 aa10.51□□□□□ -0.73
NPLOC4-213ENST00000573519 RNASE1P07998 156 aaKnown RBP10.51□□□□□ -0.73
NPLOC4-213ENST00000573519 HKR1P10072 659 aa10.51□□□□□ -0.73
NPLOC4-213ENST00000573519 FAHP16930 419 aa10.51□□□□□ -0.73
NPLOC4-213ENST00000573519 HTR1FP30939 366 aa10.51□□□□□ -0.73
NPLOC4-213ENST00000573519 DCTDP32321 178 aa10.51□□□□□ -0.73
NPLOC4-213ENST00000573519 CDC42P60953 191 aa10.51□□□□□ -0.73
NPLOC4-213ENST00000573519 RIPPLY1Q0D2K3 151 aa10.51□□□□□ -0.73
NPLOC4-213ENST00000573519 TUSC1Q2TAM9 212 aa10.51□□□□□ -0.73
NPLOC4-213ENST00000573519 LRRC10Q5BKY1 277 aa10.51□□□□□ -0.73
NPLOC4-213ENST00000573519 BCL2L15Q5TBC7 163 aa10.51□□□□□ -0.73
NPLOC4-213ENST00000573519 PLCXD3Q63HM9 321 aa10.51□□□□□ -0.73
NPLOC4-213ENST00000573519 SSX6Q7RTT6 188 aa10.51□□□□□ -0.73
NPLOC4-213ENST00000573519 PDZD9Q8IXQ8 264 aa10.51□□□□□ -0.73
NPLOC4-213ENST00000573519 OR8J1Q8NGP2 316 aa10.51□□□□□ -0.73
NPLOC4-213ENST00000573519 OR10Z1Q8NGY1 313 aa10.51□□□□□ -0.73
NPLOC4-213ENST00000573519 H1FXQ92522 213 aaKnown RBP10.51□□□□□ -0.73
NPLOC4-213ENST00000573519 EME1Q96AY2 570 aa10.51□□□□□ -0.73
NPLOC4-213ENST00000573519 C12orf43Q96C57 262 aaKnown RBP10.51□□□□□ -0.73
NPLOC4-213ENST00000573519 TBX15Q96SF7 602 aa10.51□□□□□ -0.73
NPLOC4-213ENST00000573519 MBOAT4Q96T53 435 aa10.51□□□□□ -0.73
NPLOC4-213ENST00000573519 CLN6Q9NWW5 311 aa10.51□□□□□ -0.73
NPLOC4-213ENST00000573519 IMPAD1Q9NX62 359 aa10.51□□□□□ -0.73
NPLOC4-213ENST00000573519 HAO2Q9NYQ3 351 aa10.51□□□□□ -0.73
NPLOC4-213ENST00000573519 AASSQ9UDR5 926 aa10.51□□□□□ -0.73
NPLOC4-213ENST00000573519 NUFIP1Q9UHK0 495 aaKnown RBP10.51□□□□□ -0.73
NPLOC4-213ENST00000573519 MRM2Q9UI43 246 aaKnown RBP10.51□□□□□ -0.73
NPLOC4-213ENST00000573519 RPUSD1Q9UJJ7 312 aaKnown RBP10.51□□□□□ -0.73
NPLOC4-213ENST00000573519 PIGLQ9Y2B2 252 aa10.51□□□□□ -0.73
NPLOC4-213ENST00000573519 CENPVL3A0A0U1RRI6 287 aa10.5□□□□□ -0.73
NPLOC4-213ENST00000573519 ENTPD6O75354 484 aa10.5□□□□□ -0.73
NPLOC4-213ENST00000573519 MTRF1O75570 445 aaKnown RBP10.5□□□□□ -0.73
NPLOC4-213ENST00000573519 RHBDL1O75783 438 aa10.5□□□□□ -0.73
NPLOC4-213ENST00000573519 MMP9P14780 707 aa10.5□□□□□ -0.73
NPLOC4-213ENST00000573519 GLRA1P23415 457 aa10.5□□□□□ -0.73
NPLOC4-213ENST00000573519 GABRA2P47869 451 aa10.5□□□□□ -0.73
NPLOC4-213ENST00000573519 GNG3P63215 75 aa10.5□□□□□ -0.73
NPLOC4-213ENST00000573519 FOXL1Q12952 345 aa10.5□□□□□ -0.73
NPLOC4-213ENST00000573519 PDCD1Q15116 288 aa10.5□□□□□ -0.73
NPLOC4-213ENST00000573519 CEACAM21Q3KPI0 293 aa10.5□□□□□ -0.73
NPLOC4-213ENST00000573519 STUMQ69YW2 141 aa10.5□□□□□ -0.73
NPLOC4-213ENST00000573519 PQLC1Q8N2U9 271 aa10.5□□□□□ -0.73
NPLOC4-213ENST00000573519 OR10H4Q8NGA5 316 aa10.5□□□□□ -0.73
NPLOC4-213ENST00000573519 GATAD2BQ8WXI9 593 aa10.5□□□□□ -0.73
NPLOC4-213ENST00000573519 TAF15Q92804 592 aaKnown RBP eCLIP10.5□□□□□ -0.73
NPLOC4-213ENST00000573519 MNTQ99583 582 aa10.5□□□□□ -0.73
NPLOC4-213ENST00000573519 C9orf16Q9BUW7 83 aa10.5□□□□□ -0.73
NPLOC4-213ENST00000573519 SIRPDQ9H106 197 aa10.5□□□□□ -0.73
NPLOC4-213ENST00000573519 CNTD2Q9H8S5 307 aa10.5□□□□□ -0.73
NPLOC4-213ENST00000573519 ENPP5Q9UJA9 477 aa10.5□□□□□ -0.73
NPLOC4-213ENST00000573519 PCDHGB1Q9Y5G3 927 aa10.5□□□□□ -0.73
NPLOC4-213ENST00000573519 WNK2Q9Y3S1 2297 aa10.49□□□□□ -0.73
NPLOC4-213ENST00000573519 A0A1W2PQL4 384 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms