RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 SP6Q3SY56 376 aa2.81□□□□□ -1.96
LINC00557-201ENST00000563184 MLIPQ5VWP3 458 aa2.81□□□□□ -1.96
LINC00557-201ENST00000563184 OR4M2Q8NGB6 313 aa2.81□□□□□ -1.96
LINC00557-201ENST00000563184 OR5M1Q8NGP8 315 aa2.81□□□□□ -1.96
LINC00557-201ENST00000563184 TCP10LQ8TDR4 215 aa2.81□□□□□ -1.96
LINC00557-201ENST00000563184 TOP1MTQ969P6 601 aa2.81□□□□□ -1.96
LINC00557-201ENST00000563184 ALS2CR12Q96Q35 445 aa2.81□□□□□ -1.96
LINC00557-201ENST00000563184 FRMD8P1Q9BZ68 369 aaPredicted RBP2.81□□□□□ -1.96
LINC00557-201ENST00000563184 CA10Q9NS85 328 aa2.81□□□□□ -1.96
LINC00557-201ENST00000563184 NDRG2Q9UN36 371 aaKnown RBP2.81□□□□□ -1.96
LINC00557-201ENST00000563184 SHROOM3Q8TF72 1996 aa2.81□□□□□ -1.96
LINC00557-201ENST00000563184 IGHV6-1A0A0B4J1U7 121 aa2.8□□□□□ -1.96
LINC00557-201ENST00000563184 IGKV1-6A0A0C4DH72 117 aa2.8□□□□□ -1.96
LINC00557-201ENST00000563184 VGLL3A8MV65 326 aa2.8□□□□□ -1.96
LINC00557-201ENST00000563184 CENPBD1B2RD01 187 aa2.8□□□□□ -1.96
LINC00557-201ENST00000563184 UPK1BO75841 260 aa2.8□□□□□ -1.96
LINC00557-201ENST00000563184 TTC4O95801 387 aa2.8□□□□□ -1.96
LINC00557-201ENST00000563184 PTTG1O95997 202 aa2.8□□□□□ -1.96
LINC00557-201ENST00000563184 OR2W3Q7Z3T1 314 aa2.8□□□□□ -1.96
LINC00557-201ENST00000563184 ZCCHC24Q8N2G6 241 aaKnown RBP2.8□□□□□ -1.96
LINC00557-201ENST00000563184 PHF10Q8WUB8 498 aaKnown RBP2.8□□□□□ -1.96
LINC00557-201ENST00000563184 NAPGQ99747 312 aaPredicted RBP2.8□□□□□ -1.96
LINC00557-201ENST00000563184 SIGLEC1Q9BZZ2 1709 aa2.79□□□□□ -1.96
LINC00557-201ENST00000563184 LOC100653049A0A140TA62 436 aa2.79□□□□□ -1.96
LINC00557-201ENST00000563184 DFFAO00273 331 aa2.79□□□□□ -1.96
LINC00557-201ENST00000563184 KRT34O76011 436 aa2.79□□□□□ -1.96
LINC00557-201ENST00000563184 GCGP01275 180 aa2.79□□□□□ -1.96
LINC00557-201ENST00000563184 IGKV1-39P01597 117 aa2.79□□□□□ -1.96
LINC00557-201ENST00000563184 IGKV1D-39P04432 117 aa2.79□□□□□ -1.96
LINC00557-201ENST00000563184 MSR1P21757 451 aa2.79□□□□□ -1.96
LINC00557-201ENST00000563184 ARL2P36404 184 aa2.79□□□□□ -1.96
LINC00557-201ENST00000563184 MPV17P39210 176 aa2.79□□□□□ -1.96
LINC00557-201ENST00000563184 IDH2P48735 452 aaKnown RBP2.79□□□□□ -1.96
LINC00557-201ENST00000563184 PPP1CAP62136 330 aa2.79□□□□□ -1.96
LINC00557-201ENST00000563184 TBPL2Q6SJ96 375 aa2.79□□□□□ -1.96
LINC00557-201ENST00000563184 CASP12Q6UXS9 341 aa2.79□□□□□ -1.96
LINC00557-201ENST00000563184 ASCL4Q6XD76 172 aa2.79□□□□□ -1.96
LINC00557-201ENST00000563184 SLC35D2Q76EJ3 337 aa2.79□□□□□ -1.96
LINC00557-201ENST00000563184 LINC00523Q86TU6 105 aa2.79□□□□□ -1.96
LINC00557-201ENST00000563184 ORMDL3Q8N138 153 aa2.79□□□□□ -1.96
LINC00557-201ENST00000563184 LINC00304Q8N9R0 145 aa2.79□□□□□ -1.96
LINC00557-201ENST00000563184 TMEM234Q8WY98 164 aa2.79□□□□□ -1.96
LINC00557-201ENST00000563184 TFGQ92734 400 aaPredicted RBP2.79□□□□□ -1.96
LINC00557-201ENST00000563184 BCL7BQ9BQE9 202 aa2.79□□□□□ -1.96
LINC00557-201ENST00000563184 FBXO44Q9H4M3 255 aa2.79□□□□□ -1.96
LINC00557-201ENST00000563184 FANCEQ9HB96 536 aa2.79□□□□□ -1.96
LINC00557-201ENST00000563184 PPIL1Q9Y3C6 166 aa2.79□□□□□ -1.96
LINC00557-201ENST00000563184 KLF12Q9Y4X4 402 aa2.79□□□□□ -1.96
LINC00557-201ENST00000563184 SBNO1A3KN83 1393 aa2.78□□□□□ -1.96
LINC00557-201ENST00000563184 GOLGA8JA6NMD2 632 aa2.78□□□□□ -1.96
LINC00557-201ENST00000563184 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.78□□□□□ -1.96
LINC00557-201ENST00000563184 CNMDO75829 334 aa2.78□□□□□ -1.96
LINC00557-201ENST00000563184 SCO1O75880 301 aa2.78□□□□□ -1.96
LINC00557-201ENST00000563184 SMC2O95347 1197 aa2.78□□□□□ -1.96
LINC00557-201ENST00000563184 GOLGA8HP0CJ92 632 aa2.78□□□□□ -1.96
LINC00557-201ENST00000563184 CSKP41240 450 aa2.78□□□□□ -1.96
LINC00557-201ENST00000563184 SLC35A1P78382 337 aa2.78□□□□□ -1.96
LINC00557-201ENST00000563184 IL15RAQ13261 267 aa2.78□□□□□ -1.96
LINC00557-201ENST00000563184 ZNF321PQ8N8H1 164 aa2.78□□□□□ -1.96
LINC00557-201ENST00000563184 FBXO36Q8NEA4 188 aa2.78□□□□□ -1.96
LINC00557-201ENST00000563184 OR5T3Q8NGG3 340 aa2.78□□□□□ -1.96
LINC00557-201ENST00000563184 OR10Z1Q8NGY1 313 aa2.78□□□□□ -1.96
LINC00557-201ENST00000563184 OR1P1Q8NH06 330 aa2.78□□□□□ -1.96
LINC00557-201ENST00000563184 OR52N1Q8NH53 320 aa2.78□□□□□ -1.96
LINC00557-201ENST00000563184 SNF8Q96H20 258 aa2.78□□□□□ -1.96
LINC00557-201ENST00000563184 LHX5Q9H2C1 402 aa2.78□□□□□ -1.96
LINC00557-201ENST00000563184 LOC102724200A0A096LPH7 203 aaPredicted RBP2.77□□□□□ -1.97
LINC00557-201ENST00000563184 A0A1W2PRF3 423 aa2.77□□□□□ -1.97
LINC00557-201ENST00000563184 A0A1W2PRM7 423 aa2.77□□□□□ -1.97
LINC00557-201ENST00000563184 ISPDA4D126 451 aa2.77□□□□□ -1.97
LINC00557-201ENST00000563184 CENPXA8MT69 81 aa2.77□□□□□ -1.97
LINC00557-201ENST00000563184 PRAMEF26H0Y7S4 382 aa2.77□□□□□ -1.97
LINC00557-201ENST00000563184 ZNF701M0R085 212 aaPredicted RBP2.77□□□□□ -1.97
LINC00557-201ENST00000563184 MFNGO00587 321 aa2.77□□□□□ -1.97
LINC00557-201ENST00000563184 MYL12BO14950 172 aa2.77□□□□□ -1.97
LINC00557-201ENST00000563184 MMP7P09237 267 aaPredicted RBP2.77□□□□□ -1.97
LINC00557-201ENST00000563184 SLC35G6P0C7Q6 338 aa2.77□□□□□ -1.97
LINC00557-201ENST00000563184 GZMAP12544 262 aa2.77□□□□□ -1.97
LINC00557-201ENST00000563184 PRKACAP17612 351 aa2.77□□□□□ -1.97
LINC00557-201ENST00000563184 MORN3Q6PF18 240 aaPredicted RBP2.77□□□□□ -1.97
LINC00557-201ENST00000563184 TMEM136Q6ZRR5 245 aa2.77□□□□□ -1.97
LINC00557-201ENST00000563184 BBS7Q8IWZ6 715 aa2.77□□□□□ -1.97
LINC00557-201ENST00000563184 SLC7A5P1Q8MH63 180 aa2.77□□□□□ -1.97
LINC00557-201ENST00000563184 FAM184AQ8NB25 1140 aa2.77□□□□□ -1.97
LINC00557-201ENST00000563184 OR2M7Q8NG81 312 aa2.77□□□□□ -1.97
LINC00557-201ENST00000563184 OR1S1Q8NH92 325 aa2.77□□□□□ -1.97
LINC00557-201ENST00000563184 SFXN5Q8TD22 340 aa2.77□□□□□ -1.97
LINC00557-201ENST00000563184 CHRNA10Q9GZZ6 450 aa2.77□□□□□ -1.97
LINC00557-201ENST00000563184 ARMC7Q9H6L4 198 aa2.77□□□□□ -1.97
LINC00557-201ENST00000563184 KPTNQ9Y664 436 aa2.77□□□□□ -1.97
LINC00557-201ENST00000563184 RPRD2Q5VT52 1461 aaKnown RBP2.77□□□□□ -1.97
LINC00557-201ENST00000563184 TMEM131Q92545 1883 aa2.76□□□□□ -1.97
LINC00557-201ENST00000563184 IGHV2OR16-5A0A0B4J2B6 119 aa2.76□□□□□ -1.97
LINC00557-201ENST00000563184 A8MWL6 223 aa2.76□□□□□ -1.97
LINC00557-201ENST00000563184 MAS1P04201 325 aa2.76□□□□□ -1.97
LINC00557-201ENST00000563184 IVDP26440 423 aa2.76□□□□□ -1.97
LINC00557-201ENST00000563184 PRSS3P35030 304 aa2.76□□□□□ -1.97
LINC00557-201ENST00000563184 ERFP50548 548 aa2.76□□□□□ -1.97
LINC00557-201ENST00000563184 HCCSP53701 268 aa2.76□□□□□ -1.97
LINC00557-201ENST00000563184 BTN1A1Q13410 526 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms