RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 FAM216BQ8N7L0 139 aa13.58□□□□□ -0.24
CCND1-205ENST00000542367 SLC25A28Q96A46 364 aa13.58□□□□□ -0.24
CCND1-205ENST00000542367 C12orf43Q96C57 262 aaKnown RBP13.58□□□□□ -0.24
CCND1-205ENST00000542367 WDR13Q9H1Z4 485 aa13.58□□□□□ -0.24
CCND1-205ENST00000542367 GPR84Q9NQS5 396 aa13.58□□□□□ -0.24
CCND1-205ENST00000542367 SNTG1Q9NSN8 517 aa13.58□□□□□ -0.24
CCND1-205ENST00000542367 DNAJB11Q9UBS4 358 aa13.58□□□□□ -0.24
CCND1-205ENST00000542367 ENOPH1Q9UHY7 261 aa13.58□□□□□ -0.24
CCND1-205ENST00000542367 CENPVL3A0A0U1RRI6 287 aa13.57□□□□□ -0.24
CCND1-205ENST00000542367 ZNF732B4DXR9 585 aa13.57□□□□□ -0.24
CCND1-205ENST00000542367 CLDN34H7C241 214 aa13.57□□□□□ -0.24
CCND1-205ENST00000542367 AKR7A2O43488 359 aa13.57□□□□□ -0.24
CCND1-205ENST00000542367 CIB2O75838 187 aa13.57□□□□□ -0.24
CCND1-205ENST00000542367 IGLV3-1P01715 115 aa13.57□□□□□ -0.24
CCND1-205ENST00000542367 RNASE1P07998 156 aaKnown RBP13.57□□□□□ -0.24
CCND1-205ENST00000542367 ATP6V1B1P15313 513 aa13.57□□□□□ -0.24
CCND1-205ENST00000542367 TGM4P49221 684 aa13.57□□□□□ -0.24
CCND1-205ENST00000542367 GPM6AP51674 278 aa13.57□□□□□ -0.24
CCND1-205ENST00000542367 ACTR3P61158 418 aa13.57□□□□□ -0.24
CCND1-205ENST00000542367 GNG3P63215 75 aa13.57□□□□□ -0.24
CCND1-205ENST00000542367 MFGE8Q08431 387 aaPredicted RBP13.57□□□□□ -0.24
CCND1-205ENST00000542367 RIPPLY1Q0D2K3 151 aa13.57□□□□□ -0.24
CCND1-205ENST00000542367 CEACAM21Q3KPI0 293 aa13.57□□□□□ -0.24
CCND1-205ENST00000542367 ATPAF1Q5TC12 328 aaPredicted RBP13.57□□□□□ -0.24
CCND1-205ENST00000542367 METTL11BQ5VVY1 283 aa13.57□□□□□ -0.24
CCND1-205ENST00000542367 RUSC1-AS1Q66K80 236 aa13.57□□□□□ -0.24
CCND1-205ENST00000542367 STUMQ69YW2 141 aa13.57□□□□□ -0.24
CCND1-205ENST00000542367 MOB3CQ70IA8 216 aa13.57□□□□□ -0.24
CCND1-205ENST00000542367 GID4Q8IVV7 300 aa13.57□□□□□ -0.24
CCND1-205ENST00000542367 ITFG2Q969R8 447 aa13.57□□□□□ -0.24
CCND1-205ENST00000542367 CENPNQ96H22 339 aaPredicted RBP13.57□□□□□ -0.24
CCND1-205ENST00000542367 MNTQ99583 582 aa13.57□□□□□ -0.24
CCND1-205ENST00000542367 SIRPDQ9H106 197 aa13.57□□□□□ -0.24
CCND1-205ENST00000542367 CNTD2Q9H8S5 307 aa13.57□□□□□ -0.24
CCND1-205ENST00000542367 NUFIP1Q9UHK0 495 aaKnown RBP13.57□□□□□ -0.24
CCND1-205ENST00000542367 RPUSD1Q9UJJ7 312 aaKnown RBP13.57□□□□□ -0.24
CCND1-205ENST00000542367 OAZ3Q9UMX2 235 aa13.57□□□□□ -0.24
CCND1-205ENST00000542367 ZNF670-ZNF695F2Z2N8 137 aa13.56□□□□□ -0.24
CCND1-205ENST00000542367 LOC110117498-PIK3R3F6TDL0 507 aa13.56□□□□□ -0.24
CCND1-205ENST00000542367 NDUFB3O43676 98 aa13.56□□□□□ -0.24
CCND1-205ENST00000542367 SRSF10O75494 262 aaKnown RBP13.56□□□□□ -0.24
CCND1-205ENST00000542367 TTRP02766 147 aa13.56□□□□□ -0.24
CCND1-205ENST00000542367 FOXL1Q12952 345 aa13.56□□□□□ -0.24
CCND1-205ENST00000542367 IKZF1Q13422 519 aa13.56□□□□□ -0.24
CCND1-205ENST00000542367 OR5A2Q8NGI9 324 aa13.56□□□□□ -0.24
CCND1-205ENST00000542367 OR51G2Q8NGK0 314 aa13.56□□□□□ -0.24
CCND1-205ENST00000542367 ZDHHC16Q969W1 377 aa13.56□□□□□ -0.24
CCND1-205ENST00000542367 RAB3IPQ96QF0 476 aaPredicted RBP13.56□□□□□ -0.24
CCND1-205ENST00000542367 OR51I2Q9H344 312 aa13.56□□□□□ -0.24
CCND1-205ENST00000542367 RIBC2Q9H4K1 309 aa13.56□□□□□ -0.24
CCND1-205ENST00000542367 CLN6Q9NWW5 311 aa13.56□□□□□ -0.24
CCND1-205ENST00000542367 GTF2A1LQ9UNN4 478 aa13.56□□□□□ -0.24
CCND1-205ENST00000542367 PIGLQ9Y2B2 252 aa13.56□□□□□ -0.24
CCND1-205ENST00000542367 R4GMQ9 66 aa13.56□□□□□ -0.24
CCND1-205ENST00000542367 SAC3D1A6NKF1 404 aa13.55□□□□□ -0.24
CCND1-205ENST00000542367 HOXA3O43365 443 aaPredicted RBP13.55□□□□□ -0.24
CCND1-205ENST00000542367 RHBDL1O75783 438 aa13.55□□□□□ -0.24
CCND1-205ENST00000542367 TFF1P04155 84 aa13.55□□□□□ -0.24
CCND1-205ENST00000542367 SELLP14151 372 aa13.55□□□□□ -0.24
CCND1-205ENST00000542367 FAHP16930 419 aa13.55□□□□□ -0.24
CCND1-205ENST00000542367 GLRA1P23415 457 aa13.55□□□□□ -0.24
CCND1-205ENST00000542367 EGR3Q06889 387 aa13.55□□□□□ -0.24
CCND1-205ENST00000542367 PDCD1Q15116 288 aa13.55□□□□□ -0.24
CCND1-205ENST00000542367 LRRC10Q5BKY1 277 aa13.55□□□□□ -0.24
CCND1-205ENST00000542367 ZBTB37Q5TC79 503 aa13.55□□□□□ -0.24
CCND1-205ENST00000542367 ZNF788Q6ZQV5 615 aa13.55□□□□□ -0.24
CCND1-205ENST00000542367 PLEKHG7Q6ZR37 379 aa13.55□□□□□ -0.24
CCND1-205ENST00000542367 ASRGL1Q7L266 308 aa13.55□□□□□ -0.24
CCND1-205ENST00000542367 LY6G5BQ8NDX9 201 aa13.55□□□□□ -0.24
CCND1-205ENST00000542367 ANGPTL6Q8NI99 470 aa13.55□□□□□ -0.24
CCND1-205ENST00000542367 GATAD2BQ8WXI9 593 aa13.55□□□□□ -0.24
CCND1-205ENST00000542367 LHX4Q969G2 390 aa13.55□□□□□ -0.24
CCND1-205ENST00000542367 TBX5Q99593 518 aa13.55□□□□□ -0.24
CCND1-205ENST00000542367 OSBPL10Q9BXB5 764 aa13.55□□□□□ -0.24
CCND1-205ENST00000542367 DNTTIP1Q9H147 329 aa13.55□□□□□ -0.24
CCND1-205ENST00000542367 PRDM13Q9H4Q3 707 aa13.55□□□□□ -0.24
CCND1-205ENST00000542367 MRM2Q9UI43 246 aaKnown RBP13.55□□□□□ -0.24
CCND1-205ENST00000542367 ENPP5Q9UJA9 477 aa13.55□□□□□ -0.24
CCND1-205ENST00000542367 OR52A1Q9UKL2 312 aa13.55□□□□□ -0.24
CCND1-205ENST00000542367 TENM1Q9UKZ4 2725 aa13.55□□□□□ -0.24
CCND1-205ENST00000542367 GPR37O15354 613 aa13.54□□□□□ -0.24
CCND1-205ENST00000542367 MTRF1O75570 445 aaKnown RBP13.54□□□□□ -0.24
CCND1-205ENST00000542367 DHRS3O75911 302 aa13.54□□□□□ -0.24
CCND1-205ENST00000542367 CDONQ4KMG0 1287 aa13.54□□□□□ -0.24
CCND1-205ENST00000542367 BCL2L15Q5TBC7 163 aa13.54□□□□□ -0.24
CCND1-205ENST00000542367 PLCXD3Q63HM9 321 aa13.54□□□□□ -0.24
CCND1-205ENST00000542367 SSX6Q7RTT6 188 aa13.54□□□□□ -0.24
CCND1-205ENST00000542367 ELMOD2Q8IZ81 293 aa13.54□□□□□ -0.24
CCND1-205ENST00000542367 ZNF671Q8TAW3 534 aa13.54□□□□□ -0.24
CCND1-205ENST00000542367 PYDC1Q8WXC3 89 aa13.54□□□□□ -0.24
CCND1-205ENST00000542367 TAF15Q92804 592 aaKnown RBP eCLIP13.54□□□□□ -0.24
CCND1-205ENST00000542367 MED30Q96HR3 178 aa13.54□□□□□ -0.24
CCND1-205ENST00000542367 GAFA1Q96PS6 74 aa13.54□□□□□ -0.24
CCND1-205ENST00000542367 RBM4BQ9BQ04 359 aaKnown RBP13.54□□□□□ -0.24
CCND1-205ENST00000542367 GABARAPL3Q9BY60 117 aa13.54□□□□□ -0.24
CCND1-205ENST00000542367 MOB1AQ9H8S9 216 aa13.54□□□□□ -0.24
CCND1-205ENST00000542367 ONECUT1Q9UBC0 465 aa13.54□□□□□ -0.24
CCND1-205ENST00000542367 NLKQ9UBE8 527 aa13.54□□□□□ -0.24
CCND1-205ENST00000542367 WARS2Q9UGM6 360 aaKnown RBP13.54□□□□□ -0.24
CCND1-205ENST00000542367 SNX5Q9Y5X3 404 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms