RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 CDS1Q92903 461 aa3.39□□□□□ -1.87
HMGB1P47-201ENST00000511281 ADTRPQ96IZ2 230 aa3.39□□□□□ -1.87
HMGB1P47-201ENST00000511281 CIB1Q99828 191 aa3.39□□□□□ -1.87
HMGB1P47-201ENST00000511281 TIMM29Q9BSF4 260 aa3.39□□□□□ -1.87
HMGB1P47-201ENST00000511281 PLEKHA1Q9HB21 404 aa3.39□□□□□ -1.87
HMGB1P47-201ENST00000511281 SPACA1Q9HBV2 294 aa3.39□□□□□ -1.87
HMGB1P47-201ENST00000511281 EXOSC4Q9NPD3 245 aaKnown RBP3.39□□□□□ -1.87
HMGB1P47-201ENST00000511281 ACOT13Q9NPJ3 140 aa3.39□□□□□ -1.87
HMGB1P47-201ENST00000511281 OR2S2Q9NQN1 319 aa3.39□□□□□ -1.87
HMGB1P47-201ENST00000511281 CYB5R1Q9UHQ9 305 aa3.39□□□□□ -1.87
HMGB1P47-201ENST00000511281 WIF1Q9Y5W5 379 aa3.39□□□□□ -1.87
HMGB1P47-201ENST00000511281 USP42Q9H9J4 1324 aaKnown RBP3.39□□□□□ -1.87
HMGB1P47-201ENST00000511281 SIGLEC1Q9BZZ2 1709 aa3.39□□□□□ -1.87
HMGB1P47-201ENST00000511281 AK9Q5TCS8 1911 aa3.38□□□□□ -1.87
HMGB1P47-201ENST00000511281 IGHV6-1A0A0B4J1U7 121 aa3.38□□□□□ -1.87
HMGB1P47-201ENST00000511281 SLC5A10A0PJK1 596 aa3.38□□□□□ -1.87
HMGB1P47-201ENST00000511281 MANBAO00462 879 aa3.38□□□□□ -1.87
HMGB1P47-201ENST00000511281 IGLV2-8P01709 118 aa3.38□□□□□ -1.87
HMGB1P47-201ENST00000511281 PAX6P26367 422 aa3.38□□□□□ -1.87
HMGB1P47-201ENST00000511281 CXCL12P48061 93 aa3.38□□□□□ -1.87
HMGB1P47-201ENST00000511281 OR12D2P58182 307 aa3.38□□□□□ -1.87
HMGB1P47-201ENST00000511281 TAS2R31P59538 309 aa3.38□□□□□ -1.87
HMGB1P47-201ENST00000511281 DSTNP60981 165 aa3.38□□□□□ -1.87
HMGB1P47-201ENST00000511281 TSPAN5P62079 268 aa3.38□□□□□ -1.87
HMGB1P47-201ENST00000511281 KRT71Q3SY84 523 aa3.38□□□□□ -1.87
HMGB1P47-201ENST00000511281 ZNF691Q5VV52 312 aa3.38□□□□□ -1.87
HMGB1P47-201ENST00000511281 GUSBP11Q6P575 273 aa3.38□□□□□ -1.87
HMGB1P47-201ENST00000511281 MDP1Q86V88 176 aa3.38□□□□□ -1.87
HMGB1P47-201ENST00000511281 TMEM25Q86YD3 366 aa3.38□□□□□ -1.87
HMGB1P47-201ENST00000511281 LRRC8AQ8IWT6 810 aa3.38□□□□□ -1.87
HMGB1P47-201ENST00000511281 UBALD2Q8IYN6 164 aa3.38□□□□□ -1.87
HMGB1P47-201ENST00000511281 UBALD1Q8TB05 177 aa3.38□□□□□ -1.87
HMGB1P47-201ENST00000511281 FOPNLQ96NB1 174 aa3.38□□□□□ -1.87
HMGB1P47-201ENST00000511281 CTRCQ99895 268 aa3.38□□□□□ -1.87
HMGB1P47-201ENST00000511281 SLC38A10Q9HBR0 1119 aa3.38□□□□□ -1.87
HMGB1P47-201ENST00000511281 DDIT4Q9NX09 232 aa3.38□□□□□ -1.87
HMGB1P47-201ENST00000511281 IGSF9BQ9UPX0 1349 aa3.38□□□□□ -1.87
HMGB1P47-201ENST00000511281 TNS2Q63HR2 1409 aa3.37□□□□□ -1.87
HMGB1P47-201ENST00000511281 TRAV8-6A0A0B4J262 113 aa3.37□□□□□ -1.87
HMGB1P47-201ENST00000511281 ERICH2A1L162 156 aa3.37□□□□□ -1.87
HMGB1P47-201ENST00000511281 OR5H1A6NKK0 313 aa3.37□□□□□ -1.87
HMGB1P47-201ENST00000511281 NDUFC2-KCTD14E9PQ53 114 aa3.37□□□□□ -1.87
HMGB1P47-201ENST00000511281 hCG_2039718K7EN88 272 aa3.37□□□□□ -1.87
HMGB1P47-201ENST00000511281 EIF1BO60739 113 aaKnown RBP3.37□□□□□ -1.87
HMGB1P47-201ENST00000511281 OR56A5P0C7T3 313 aa3.37□□□□□ -1.87
HMGB1P47-201ENST00000511281 C1GALT1C1LP0DN25 315 aa3.37□□□□□ -1.87
HMGB1P47-201ENST00000511281 NQO2P16083 231 aa3.37□□□□□ -1.87
HMGB1P47-201ENST00000511281 EIF1P41567 113 aaKnown RBP3.37□□□□□ -1.87
HMGB1P47-201ENST00000511281 GUSBP1Q15486 140 aa3.37□□□□□ -1.87
HMGB1P47-201ENST00000511281 ZBTB6Q15916 424 aa3.37□□□□□ -1.87
HMGB1P47-201ENST00000511281 PRSS8Q16651 343 aa3.37□□□□□ -1.87
HMGB1P47-201ENST00000511281 FBXL19-AS1Q494R0 122 aa3.37□□□□□ -1.87
HMGB1P47-201ENST00000511281 HHATQ5VTY9 493 aa3.37□□□□□ -1.87
HMGB1P47-201ENST00000511281 ZFP2Q6ZN57 461 aa3.37□□□□□ -1.87
HMGB1P47-201ENST00000511281 SSX6Q7RTT6 188 aa3.37□□□□□ -1.87
HMGB1P47-201ENST00000511281 KRTAP11-1Q8IUC1 163 aa3.37□□□□□ -1.87
HMGB1P47-201ENST00000511281 NELFCDQ8IXH7 590 aa3.37□□□□□ -1.87
HMGB1P47-201ENST00000511281 CYB561A3Q8NBI2 242 aa3.37□□□□□ -1.87
HMGB1P47-201ENST00000511281 SFXN5Q8TD22 340 aa3.37□□□□□ -1.87
HMGB1P47-201ENST00000511281 GHSRQ92847 366 aa3.37□□□□□ -1.87
HMGB1P47-201ENST00000511281 MRPL48Q96GC5 212 aaKnown RBP3.37□□□□□ -1.87
HMGB1P47-201ENST00000511281 SNF8Q96H20 258 aa3.37□□□□□ -1.87
HMGB1P47-201ENST00000511281 COPS4Q9BT78 406 aa3.37□□□□□ -1.87
HMGB1P47-201ENST00000511281 PLA2G2FQ9BZM2 168 aa3.37□□□□□ -1.87
HMGB1P47-201ENST00000511281 ZNF430Q9H8G1 570 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P47-201ENST00000511281 CD300AQ9UGN4 299 aa3.37□□□□□ -1.87
HMGB1P47-201ENST00000511281 FADS3Q9Y5Q0 445 aa3.37□□□□□ -1.87
HMGB1P47-201ENST00000511281 DOCK9Q9BZ29 2069 aa3.37□□□□□ -1.87
HMGB1P47-201ENST00000511281 ZNF233A6NK53 670 aa3.36□□□□□ -1.87
HMGB1P47-201ENST00000511281 CYSRT1A8MQ03 144 aa3.36□□□□□ -1.87
HMGB1P47-201ENST00000511281 CCDC22O60826 627 aa3.36□□□□□ -1.87
HMGB1P47-201ENST00000511281 BRI3O95415 125 aa3.36□□□□□ -1.87
HMGB1P47-201ENST00000511281 CTDNEP1O95476 244 aa3.36□□□□□ -1.87
HMGB1P47-201ENST00000511281 PSMB5P28074 263 aa3.36□□□□□ -1.87
HMGB1P47-201ENST00000511281 PRSS3P35030 304 aa3.36□□□□□ -1.87
HMGB1P47-201ENST00000511281 OPRK1P41145 380 aa3.36□□□□□ -1.87
HMGB1P47-201ENST00000511281 RANBP1P43487 201 aa3.36□□□□□ -1.87
HMGB1P47-201ENST00000511281 LRRC63Q05C16 580 aa3.36□□□□□ -1.87
HMGB1P47-201ENST00000511281 TTC32Q5I0X7 151 aa3.36□□□□□ -1.87
HMGB1P47-201ENST00000511281 RESP18Q5W5W9 173 aa3.36□□□□□ -1.87
HMGB1P47-201ENST00000511281 SAXO2Q658L1 398 aa3.36□□□□□ -1.87
HMGB1P47-201ENST00000511281 THOC7Q6I9Y2 204 aaKnown RBP3.36□□□□□ -1.87
HMGB1P47-201ENST00000511281 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P47-201ENST00000511281 COMTD1Q86VU5 262 aa3.36□□□□□ -1.87
HMGB1P47-201ENST00000511281 ENTHD1Q8IYW4 607 aa3.36□□□□□ -1.87
HMGB1P47-201ENST00000511281 GAPTQ8N292 157 aa3.36□□□□□ -1.87
HMGB1P47-201ENST00000511281 ZCCHC24Q8N2G6 241 aaKnown RBP3.36□□□□□ -1.87
HMGB1P47-201ENST00000511281 OR51Q1Q8NH59 317 aa3.36□□□□□ -1.87
HMGB1P47-201ENST00000511281 ING5Q8WYH8 240 aa3.36□□□□□ -1.87
HMGB1P47-201ENST00000511281 Q96MT0 163 aa3.36□□□□□ -1.87
HMGB1P47-201ENST00000511281 ZNF75AQ96N20 296 aa3.36□□□□□ -1.87
HMGB1P47-201ENST00000511281 ALS2CR12Q96Q35 445 aa3.36□□□□□ -1.87
HMGB1P47-201ENST00000511281 ZNF649Q9BS31 505 aa3.36□□□□□ -1.87
HMGB1P47-201ENST00000511281 CHCHD7Q9BUK0 85 aa3.36□□□□□ -1.87
HMGB1P47-201ENST00000511281 METTL8Q9H825 291 aaKnown RBP3.36□□□□□ -1.87
HMGB1P47-201ENST00000511281 ZNF223Q9UK11 482 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P47-201ENST00000511281 RAB23Q9ULC3 237 aa3.36□□□□□ -1.87
HMGB1P47-201ENST00000511281 PPIL1Q9Y3C6 166 aa3.36□□□□□ -1.87
HMGB1P47-201ENST00000511281 YTHDF2Q9Y5A9 579 aaKnown RBP3.36□□□□□ -1.87
HMGB1P47-201ENST00000511281 NPHP4O75161 1426 aaPredicted RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms