RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 ZNF319Q9P2F9 582 aa11.21□□□□□ -0.61
CCHCR1-227ENST00000508852 SLC25A10Q9UBX3 287 aaPredicted RBP11.21□□□□□ -0.61
CCHCR1-227ENST00000508852 ENOPH1Q9UHY7 261 aa11.21□□□□□ -0.61
CCHCR1-227ENST00000508852 LRP12Q9Y561 859 aa11.21□□□□□ -0.61
CCHCR1-227ENST00000508852 SOX21Q9Y651 276 aaPredicted RBP11.21□□□□□ -0.61
CCHCR1-227ENST00000508852 TRBV23-1A0A0A0MS06 115 aa11.2□□□□□ -0.62
CCHCR1-227ENST00000508852 TMEM269A0A1B0GVZ9 245 aa11.2□□□□□ -0.62
CCHCR1-227ENST00000508852 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.2□□□□□ -0.62
CCHCR1-227ENST00000508852 SIGLEC5O15389 551 aa11.2□□□□□ -0.62
CCHCR1-227ENST00000508852 SELENOFO60613 162 aa11.2□□□□□ -0.62
CCHCR1-227ENST00000508852 PAHP00439 452 aa11.2□□□□□ -0.62
CCHCR1-227ENST00000508852 ACAA1P09110 424 aaPredicted RBP11.2□□□□□ -0.62
CCHCR1-227ENST00000508852 ANOS1P23352 680 aa11.2□□□□□ -0.62
CCHCR1-227ENST00000508852 GLRA1P23415 457 aa11.2□□□□□ -0.62
CCHCR1-227ENST00000508852 OMGP23515 440 aa11.2□□□□□ -0.62
CCHCR1-227ENST00000508852 UBE2E1P51965 193 aa11.2□□□□□ -0.62
CCHCR1-227ENST00000508852 ESRRGP62508 458 aa11.2□□□□□ -0.62
CCHCR1-227ENST00000508852 CBX1P83916 185 aa11.2□□□□□ -0.62
CCHCR1-227ENST00000508852 ACSM1Q08AH1 577 aa11.2□□□□□ -0.62
CCHCR1-227ENST00000508852 POU4F2Q12837 409 aa11.2□□□□□ -0.62
CCHCR1-227ENST00000508852 IKZF1Q13422 519 aa11.2□□□□□ -0.62
CCHCR1-227ENST00000508852 BRICD5Q6PL45 260 aa11.2□□□□□ -0.62
CCHCR1-227ENST00000508852 SPATA24Q86W54 205 aa11.2□□□□□ -0.62
CCHCR1-227ENST00000508852 ZNF679Q8IYX0 411 aa11.2□□□□□ -0.62
CCHCR1-227ENST00000508852 FAM216BQ8N7L0 139 aa11.2□□□□□ -0.62
CCHCR1-227ENST00000508852 OR8B12Q8NGG6 310 aa11.2□□□□□ -0.62
CCHCR1-227ENST00000508852 OR5D13Q8NGL4 314 aa11.2□□□□□ -0.62
CCHCR1-227ENST00000508852 H1FXQ92522 213 aaKnown RBP11.2□□□□□ -0.62
CCHCR1-227ENST00000508852 TEAD3Q99594 435 aa11.2□□□□□ -0.62
CCHCR1-227ENST00000508852 MOB1AQ9H8S9 216 aa11.2□□□□□ -0.62
CCHCR1-227ENST00000508852 PAPOLBQ9NRJ5 636 aaKnown RBP11.2□□□□□ -0.62
CCHCR1-227ENST00000508852 TNFRSF19Q9NS68 423 aa11.2□□□□□ -0.62
CCHCR1-227ENST00000508852 H2AFY2Q9P0M6 372 aaPredicted RBP11.2□□□□□ -0.62
CCHCR1-227ENST00000508852 NLKQ9UBE8 527 aa11.2□□□□□ -0.62
CCHCR1-227ENST00000508852 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.2□□□□□ -0.62
CCHCR1-227ENST00000508852 MEGF8Q7Z7M0 2845 aa11.19□□□□□ -0.62
CCHCR1-227ENST00000508852 TRRAPQ9Y4A5 3859 aa11.19□□□□□ -0.62
CCHCR1-227ENST00000508852 A0A0U1RQK1 487 aa11.19□□□□□ -0.62
CCHCR1-227ENST00000508852 hCG_1809904A0A1W2PP81 198 aa11.19□□□□□ -0.62
CCHCR1-227ENST00000508852 A0A1W2PPE2 198 aa11.19□□□□□ -0.62
CCHCR1-227ENST00000508852 A0A1W2PR64 198 aa11.19□□□□□ -0.62
CCHCR1-227ENST00000508852 A0A1W2PRV1 198 aa11.19□□□□□ -0.62
CCHCR1-227ENST00000508852 OR2AT4A6NND4 320 aa11.19□□□□□ -0.62
CCHCR1-227ENST00000508852 GPR137BO60478 399 aa11.19□□□□□ -0.62
CCHCR1-227ENST00000508852 FKBP6O75344 327 aa11.19□□□□□ -0.62
CCHCR1-227ENST00000508852 SLC2A5P22732 501 aa11.19□□□□□ -0.62
CCHCR1-227ENST00000508852 ACKR3P25106 362 aa11.19□□□□□ -0.62
CCHCR1-227ENST00000508852 RIDAP52758 137 aaKnown RBP11.19□□□□□ -0.62
CCHCR1-227ENST00000508852 CRISP1P54107 249 aa11.19□□□□□ -0.62
CCHCR1-227ENST00000508852 HOXA4Q00056 320 aaPredicted RBP11.19□□□□□ -0.62
CCHCR1-227ENST00000508852 ROM1Q03395 351 aa11.19□□□□□ -0.62
CCHCR1-227ENST00000508852 APOFQ13790 326 aa11.19□□□□□ -0.62
CCHCR1-227ENST00000508852 TRPM8Q7Z2W7 1104 aa11.19□□□□□ -0.62
CCHCR1-227ENST00000508852 TMEM179BQ7Z7N9 219 aa11.19□□□□□ -0.62
CCHCR1-227ENST00000508852 COMMD2Q86X83 199 aa11.19□□□□□ -0.62
CCHCR1-227ENST00000508852 ANGPTL6Q8NI99 470 aa11.19□□□□□ -0.62
CCHCR1-227ENST00000508852 RPL3LQ92901 407 aaKnown RBP11.19□□□□□ -0.62
CCHCR1-227ENST00000508852 CLPTM1LQ96KA5 538 aa11.19□□□□□ -0.62
CCHCR1-227ENST00000508852 CITED1Q99966 193 aa11.19□□□□□ -0.62
CCHCR1-227ENST00000508852 FAM234AQ9H0X4 552 aa11.19□□□□□ -0.62
CCHCR1-227ENST00000508852 ENPP5Q9UJA9 477 aa11.19□□□□□ -0.62
CCHCR1-227ENST00000508852 SF3B6Q9Y3B4 125 aaKnown RBP11.19□□□□□ -0.62
CCHCR1-227ENST00000508852 RNF114Q9Y508 228 aa11.19□□□□□ -0.62
CCHCR1-227ENST00000508852 A0A1W2PQ09 198 aa11.18□□□□□ -0.62
CCHCR1-227ENST00000508852 TCRBV3S1A0A5B6 114 aa11.18□□□□□ -0.62
CCHCR1-227ENST00000508852 SLC22A31A6NKX4 558 aa11.18□□□□□ -0.62
CCHCR1-227ENST00000508852 ZNF732B4DXR9 585 aa11.18□□□□□ -0.62
CCHCR1-227ENST00000508852 NPFFO15130 113 aa11.18□□□□□ -0.62
CCHCR1-227ENST00000508852 AKR7A2O43488 359 aa11.18□□□□□ -0.62
CCHCR1-227ENST00000508852 WIPF1O43516 503 aa11.18□□□□□ -0.62
CCHCR1-227ENST00000508852 CLPXO76031 633 aa11.18□□□□□ -0.62
CCHCR1-227ENST00000508852 NDUFB7P17568 137 aa11.18□□□□□ -0.62
CCHCR1-227ENST00000508852 TGFBR2P37173 567 aa11.18□□□□□ -0.62
CCHCR1-227ENST00000508852 GPM6AP51674 278 aa11.18□□□□□ -0.62
CCHCR1-227ENST00000508852 SMIM21Q3B7S5 101 aa11.18□□□□□ -0.62
CCHCR1-227ENST00000508852 ZNF684Q5T5D7 378 aa11.18□□□□□ -0.62
CCHCR1-227ENST00000508852 DHRS7BQ6IAN0 325 aaPredicted RBP11.18□□□□□ -0.62
CCHCR1-227ENST00000508852 LYZL4Q96KX0 146 aa11.18□□□□□ -0.62
CCHCR1-227ENST00000508852 CNN2Q99439 309 aaKnown RBP11.18□□□□□ -0.62
CCHCR1-227ENST00000508852 PBOV1Q9GZY1 135 aa11.18□□□□□ -0.62
CCHCR1-227ENST00000508852 OR51I2Q9H344 312 aa11.18□□□□□ -0.62
CCHCR1-227ENST00000508852 C16orf95Q9H693 158 aa11.18□□□□□ -0.62
CCHCR1-227ENST00000508852 FAM206AQ9NX38 181 aa11.18□□□□□ -0.62
CCHCR1-227ENST00000508852 TVP23BQ9NYZ1 205 aa11.18□□□□□ -0.62
CCHCR1-227ENST00000508852 ZNRD1Q9P1U0 126 aa11.18□□□□□ -0.62
CCHCR1-227ENST00000508852 NUFIP1Q9UHK0 495 aaKnown RBP11.18□□□□□ -0.62
CCHCR1-227ENST00000508852 VPREB3Q9UKI3 123 aa11.18□□□□□ -0.62
CCHCR1-227ENST00000508852 POLDIP2Q9Y2S7 368 aa11.18□□□□□ -0.62
CCHCR1-227ENST00000508852 DHRS7CA6NNS2 312 aa11.17□□□□□ -0.62
CCHCR1-227ENST00000508852 FCN3O75636 299 aa11.17□□□□□ -0.62
CCHCR1-227ENST00000508852 DHRS3O75911 302 aa11.17□□□□□ -0.62
CCHCR1-227ENST00000508852 DNAJC8O75937 253 aaPredicted RBP11.17□□□□□ -0.62
CCHCR1-227ENST00000508852 IGHV4-59P01825 116 aa11.17□□□□□ -0.62
CCHCR1-227ENST00000508852 GABRA2P47869 451 aa11.17□□□□□ -0.62
CCHCR1-227ENST00000508852 RASSF2P50749 326 aa11.17□□□□□ -0.62
CCHCR1-227ENST00000508852 MIDNQ504T8 468 aa11.17□□□□□ -0.62
CCHCR1-227ENST00000508852 C11orf88Q6PI97 169 aa11.17□□□□□ -0.62
CCHCR1-227ENST00000508852 ZNF573Q86YE8 665 aa11.17□□□□□ -0.62
CCHCR1-227ENST00000508852 PIP4P2Q8N4L2 257 aa11.17□□□□□ -0.62
CCHCR1-227ENST00000508852 ZSCAN4Q8NAM6 433 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms