RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 HPSE2Q8WWQ2 592 aa12.61□□□□□ -0.39
RNF4-210ENST00000508235 C1orf159Q96HA4 380 aa12.61□□□□□ -0.39
RNF4-210ENST00000508235 RASSF4Q9H2L5 321 aa12.61□□□□□ -0.39
RNF4-210ENST00000508235 PPP1R3EQ9H7J1 279 aa12.61□□□□□ -0.39
RNF4-210ENST00000508235 BABAM2Q9NXR7 383 aa12.61□□□□□ -0.39
RNF4-210ENST00000508235 UBAP1Q9NZ09 502 aa12.61□□□□□ -0.39
RNF4-210ENST00000508235 SLC7A11Q9UPY5 501 aa12.61□□□□□ -0.39
RNF4-210ENST00000508235 ERGIC3Q9Y282 383 aa12.61□□□□□ -0.39
RNF4-210ENST00000508235 CELSR1Q9NYQ6 3014 aa12.6□□□□□ -0.39
RNF4-210ENST00000508235 TRAV38-1A0A0B4J264 116 aa12.6□□□□□ -0.39
RNF4-210ENST00000508235 ZNF732B4DXR9 585 aa12.6□□□□□ -0.39
RNF4-210ENST00000508235 PTGES3LE9PB15 166 aa12.6□□□□□ -0.39
RNF4-210ENST00000508235 ZFPL1O95159 310 aa12.6□□□□□ -0.39
RNF4-210ENST00000508235 IGHV2-5P01817 119 aa12.6□□□□□ -0.39
RNF4-210ENST00000508235 ZNF20P17024 532 aa12.6□□□□□ -0.39
RNF4-210ENST00000508235 IL2RGP31785 369 aa12.6□□□□□ -0.39
RNF4-210ENST00000508235 GPM6AP51674 278 aa12.6□□□□□ -0.39
RNF4-210ENST00000508235 TAS2R43P59537 309 aa12.6□□□□□ -0.39
RNF4-210ENST00000508235 RNLSQ5VYX0 342 aa12.6□□□□□ -0.39
RNF4-210ENST00000508235 ZNF573Q86YE8 665 aa12.6□□□□□ -0.39
RNF4-210ENST00000508235 OR13C3Q8NGS6 347 aa12.6□□□□□ -0.39
RNF4-210ENST00000508235 LRRC29Q8WV35 223 aa12.6□□□□□ -0.39
RNF4-210ENST00000508235 MSI2Q96DH6 328 aaKnown RBP12.6□□□□□ -0.39
RNF4-210ENST00000508235 CNBD2Q96M20 576 aa12.6□□□□□ -0.39
RNF4-210ENST00000508235 ZNF184Q99676 751 aaPredicted RBP12.6□□□□□ -0.39
RNF4-210ENST00000508235 CHST5Q9GZS9 411 aa12.6□□□□□ -0.39
RNF4-210ENST00000508235 YAE1D1Q9NRH1 226 aa12.6□□□□□ -0.39
RNF4-210ENST00000508235 MIOXQ9UGB7 285 aa12.6□□□□□ -0.39
RNF4-210ENST00000508235 AKAP9Q99996 3911 aa12.59□□□□□ -0.39
RNF4-210ENST00000508235 A8MV72 311 aaPredicted RBP12.59□□□□□ -0.39
RNF4-210ENST00000508235 E9PI62 339 aa12.59□□□□□ -0.39
RNF4-210ENST00000508235 H3BSH0 61 aa12.59□□□□□ -0.39
RNF4-210ENST00000508235 LGALS8O00214 317 aa12.59□□□□□ -0.39
RNF4-210ENST00000508235 CDIPTO14735 213 aa12.59□□□□□ -0.39
RNF4-210ENST00000508235 NDUFA2O43678 99 aa12.59□□□□□ -0.39
RNF4-210ENST00000508235 TGFAP01135 160 aa12.59□□□□□ -0.39
RNF4-210ENST00000508235 LHBP01229 141 aa12.59□□□□□ -0.39
RNF4-210ENST00000508235 CDK1P06493 297 aa12.59□□□□□ -0.39
RNF4-210ENST00000508235 ZNF16P17020 682 aaPredicted RBP12.59□□□□□ -0.39
RNF4-210ENST00000508235 PCMT1P22061 227 aa12.59□□□□□ -0.39
RNF4-210ENST00000508235 WNT4P56705 351 aa12.59□□□□□ -0.39
RNF4-210ENST00000508235 CDK5R1Q15078 307 aa12.59□□□□□ -0.39
RNF4-210ENST00000508235 CNN3Q15417 329 aaKnown RBP12.59□□□□□ -0.39
RNF4-210ENST00000508235 ZNF404Q494X3 552 aa12.59□□□□□ -0.39
RNF4-210ENST00000508235 WDR82Q6UXN9 313 aa12.59□□□□□ -0.39
RNF4-210ENST00000508235 DCDC5Q6ZRR9 648 aa12.59□□□□□ -0.39
RNF4-210ENST00000508235 ZNF826PQ6ZT77 177 aa12.59□□□□□ -0.39
RNF4-210ENST00000508235 NLRC3Q7RTR2 1065 aa12.59□□□□□ -0.39
RNF4-210ENST00000508235 C11orf53Q8IXP5 236 aa12.59□□□□□ -0.39
RNF4-210ENST00000508235 SCCPDHQ8NBX0 429 aa12.59□□□□□ -0.39
RNF4-210ENST00000508235 OR10Z1Q8NGY1 313 aa12.59□□□□□ -0.39
RNF4-210ENST00000508235 OR51F2Q8NH61 342 aa12.59□□□□□ -0.39
RNF4-210ENST00000508235 ZNF671Q8TAW3 534 aa12.59□□□□□ -0.39
RNF4-210ENST00000508235 GATAD2BQ8WXI9 593 aa12.59□□□□□ -0.39
RNF4-210ENST00000508235 OR51I2Q9H344 312 aa12.59□□□□□ -0.39
RNF4-210ENST00000508235 PATZ1Q9HBE1 687 aaKnown RBP12.59□□□□□ -0.39
RNF4-210ENST00000508235 TMEM165Q9HC07 324 aa12.59□□□□□ -0.39
RNF4-210ENST00000508235 NEK6Q9HC98 313 aa12.59□□□□□ -0.39
RNF4-210ENST00000508235 GPR173Q9NS66 373 aa12.59□□□□□ -0.39
RNF4-210ENST00000508235 CLEC2DQ9UHP7 191 aa12.59□□□□□ -0.39
RNF4-210ENST00000508235 BLOC1S6Q9UL45 172 aa12.59□□□□□ -0.39
RNF4-210ENST00000508235 KCNS2Q9ULS6 477 aa12.59□□□□□ -0.39
RNF4-210ENST00000508235 POLDIP2Q9Y2S7 368 aa12.59□□□□□ -0.39
RNF4-210ENST00000508235 PCDHGB5Q9Y5G0 923 aa12.59□□□□□ -0.39
RNF4-210ENST00000508235 ABCA1O95477 2261 aa12.59□□□□□ -0.39
RNF4-210ENST00000508235 ACANP16112 2415 aa12.59□□□□□ -0.39
RNF4-210ENST00000508235 PQLC2LA1A4F0 135 aa12.58□□□□□ -0.4
RNF4-210ENST00000508235 OOEPA6NGQ2 149 aa12.58□□□□□ -0.4
RNF4-210ENST00000508235 A6NIN4 97 aa12.58□□□□□ -0.4
RNF4-210ENST00000508235 OGG1O15527 345 aa12.58□□□□□ -0.4
RNF4-210ENST00000508235 MSMBP08118 114 aa12.58□□□□□ -0.4
RNF4-210ENST00000508235 MUC1P15941 1255 aaPredicted RBP12.58□□□□□ -0.4
RNF4-210ENST00000508235 C21orf33P30042 268 aaPredicted RBP12.58□□□□□ -0.4
RNF4-210ENST00000508235 GTF2A1P52655 376 aaPredicted RBP12.58□□□□□ -0.4
RNF4-210ENST00000508235 DVL1P1P54792 670 aaPredicted RBP12.58□□□□□ -0.4
RNF4-210ENST00000508235 SLC35A2P78381 396 aa12.58□□□□□ -0.4
RNF4-210ENST00000508235 RBM48Q5RL73 367 aaKnown RBP12.58□□□□□ -0.4
RNF4-210ENST00000508235 Q71RC1 249 aaPredicted RBP12.58□□□□□ -0.4
RNF4-210ENST00000508235 UTS2BQ765I0 119 aa12.58□□□□□ -0.4
RNF4-210ENST00000508235 GLCCI1Q86VQ1 547 aa12.58□□□□□ -0.4
RNF4-210ENST00000508235 GCSAMQ8N6F7 178 aa12.58□□□□□ -0.4
RNF4-210ENST00000508235 NANOGP1Q8N7R0 232 aa12.58□□□□□ -0.4
RNF4-210ENST00000508235 BOLLQ8N9W6 283 aaKnown RBP12.58□□□□□ -0.4
RNF4-210ENST00000508235 RPS4Y2Q8TD47 263 aa12.58□□□□□ -0.4
RNF4-210ENST00000508235 RPL3LQ92901 407 aaKnown RBP12.58□□□□□ -0.4
RNF4-210ENST00000508235 SMIM19Q96E16 107 aa12.58□□□□□ -0.4
RNF4-210ENST00000508235 PDCD1LG2Q9BQ51 273 aa12.58□□□□□ -0.4
RNF4-210ENST00000508235 MND1Q9BWT6 205 aa12.58□□□□□ -0.4
RNF4-210ENST00000508235 CDCA4Q9BXL8 241 aa12.58□□□□□ -0.4
RNF4-210ENST00000508235 ERVK-18Q9QC07 812 aa12.58□□□□□ -0.4
RNF4-210ENST00000508235 DHDHQ9UQ10 334 aa12.58□□□□□ -0.4
RNF4-210ENST00000508235 CEACAM18A8MTB9 384 aa12.57□□□□□ -0.4
RNF4-210ENST00000508235 FAM157AC9JC47 383 aa12.57□□□□□ -0.4
RNF4-210ENST00000508235 LMX1BO60663 402 aa12.57□□□□□ -0.4
RNF4-210ENST00000508235 FOXH1O75593 365 aa12.57□□□□□ -0.4
RNF4-210ENST00000508235 ZNF205O95201 554 aa12.57□□□□□ -0.4
RNF4-210ENST00000508235 OCM2P0CE71 109 aa12.57□□□□□ -0.4
RNF4-210ENST00000508235 OCMP0CE72 109 aaPredicted RBP12.57□□□□□ -0.4
RNF4-210ENST00000508235 RPS2P15880 293 aaKnown RBP12.57□□□□□ -0.4
RNF4-210ENST00000508235 PRKACBP22694 351 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms