RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 GLAP06280 429 aa3.53□□□□□ -1.84
HMGB1P3-201ENST00000502802 CD37P11049 281 aa3.53□□□□□ -1.84
HMGB1P3-201ENST00000502802 CCNOP22674 350 aa3.53□□□□□ -1.84
HMGB1P3-201ENST00000502802 PPICP45877 212 aa3.53□□□□□ -1.84
HMGB1P3-201ENST00000502802 ARG2P78540 354 aa3.53□□□□□ -1.84
HMGB1P3-201ENST00000502802 ERCC8Q13216 396 aa3.53□□□□□ -1.84
HMGB1P3-201ENST00000502802 ORMDL2Q53FV1 153 aa3.53□□□□□ -1.84
HMGB1P3-201ENST00000502802 APOBEC3HQ6NTF7 200 aaKnown RBP3.53□□□□□ -1.84
HMGB1P3-201ENST00000502802 ARIH2OSQ8N7S6 290 aa3.53□□□□□ -1.84
HMGB1P3-201ENST00000502802 OR6K6Q8NGW6 343 aa3.53□□□□□ -1.84
HMGB1P3-201ENST00000502802 ABHD3Q8WU67 409 aa3.53□□□□□ -1.84
HMGB1P3-201ENST00000502802 TMIGD2Q96BF3 282 aa3.53□□□□□ -1.84
HMGB1P3-201ENST00000502802 OPTNQ96CV9 577 aa3.53□□□□□ -1.84
HMGB1P3-201ENST00000502802 RNF170Q96K19 258 aa3.53□□□□□ -1.84
HMGB1P3-201ENST00000502802 CHAC1Q9BUX1 264 aa3.53□□□□□ -1.84
HMGB1P3-201ENST00000502802 SLIRPQ9GZT3 109 aaKnown RBP3.53□□□□□ -1.84
HMGB1P3-201ENST00000502802 SAV1Q9H4B6 383 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P3-201ENST00000502802 REEP1Q9H902 201 aa3.53□□□□□ -1.84
HMGB1P3-201ENST00000502802 SLC40A1Q9NP59 571 aa3.53□□□□□ -1.84
HMGB1P3-201ENST00000502802 MYOZ1Q9NP98 299 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P3-201ENST00000502802 CTSFQ9UBX1 484 aa3.53□□□□□ -1.84
HMGB1P3-201ENST00000502802 NEU3Q9UQ49 428 aa3.53□□□□□ -1.84
HMGB1P3-201ENST00000502802 EYSQ5T1H1 3165 aa3.53□□□□□ -1.84
HMGB1P3-201ENST00000502802 CROCCQ5TZA2 2017 aa3.53□□□□□ -1.84
HMGB1P3-201ENST00000502802 TET2Q6N021 2002 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P3-201ENST00000502802 MYH7P12883 1935 aa3.52□□□□□ -1.85
HMGB1P3-201ENST00000502802 MTCL1Q9Y4B5 1905 aaKnown RBP3.52□□□□□ -1.85
HMGB1P3-201ENST00000502802 IGHV3OR16-9A0A0B4J2B5 98 aa3.52□□□□□ -1.85
HMGB1P3-201ENST00000502802 CCL15-CCL14A0A0B4J2E2 113 aa3.52□□□□□ -1.85
HMGB1P3-201ENST00000502802 A0A0J9YXV3 536 aa3.52□□□□□ -1.85
HMGB1P3-201ENST00000502802 PDZK1P1A8MUH7 402 aa3.52□□□□□ -1.85
HMGB1P3-201ENST00000502802 RFXANKO14593 260 aa3.52□□□□□ -1.85
HMGB1P3-201ENST00000502802 RNF113AO15541 343 aaKnown RBP3.52□□□□□ -1.85
HMGB1P3-201ENST00000502802 NMT2O60551 498 aa3.52□□□□□ -1.85
HMGB1P3-201ENST00000502802 SLC16A7O60669 478 aa3.52□□□□□ -1.85
HMGB1P3-201ENST00000502802 PLEKHA8P1O95397 391 aa3.52□□□□□ -1.85
HMGB1P3-201ENST00000502802 BCHEP06276 602 aa3.52□□□□□ -1.85
HMGB1P3-201ENST00000502802 CTSLP07711 333 aa3.52□□□□□ -1.85
HMGB1P3-201ENST00000502802 PSMC3P17980 439 aa3.52□□□□□ -1.85
HMGB1P3-201ENST00000502802 TCN2P20062 427 aa3.52□□□□□ -1.85
HMGB1P3-201ENST00000502802 MYL9P24844 172 aa3.52□□□□□ -1.85
HMGB1P3-201ENST00000502802 RBM34P42696 430 aaKnown RBP3.52□□□□□ -1.85
HMGB1P3-201ENST00000502802 ATP5J2P56134 94 aa3.52□□□□□ -1.85
HMGB1P3-201ENST00000502802 SYNJ2BPP57105 145 aa3.52□□□□□ -1.85
HMGB1P3-201ENST00000502802 CCL15Q16663 113 aa3.52□□□□□ -1.85
HMGB1P3-201ENST00000502802 ATP6V1FQ16864 119 aa3.52□□□□□ -1.85
HMGB1P3-201ENST00000502802 FKBP1CQ5VVH2 108 aa3.52□□□□□ -1.85
HMGB1P3-201ENST00000502802 FAM92BQ6ZTR7 304 aa3.52□□□□□ -1.85
HMGB1P3-201ENST00000502802 ST13P4Q8IZP2 240 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P3-201ENST00000502802 Q8N976 141 aa3.52□□□□□ -1.85
HMGB1P3-201ENST00000502802 NDNFQ8TB73 568 aa3.52□□□□□ -1.85
HMGB1P3-201ENST00000502802 ASZ1Q8WWH4 475 aa3.52□□□□□ -1.85
HMGB1P3-201ENST00000502802 BMFQ96LC9 184 aa3.52□□□□□ -1.85
HMGB1P3-201ENST00000502802 MAP1LC3CQ9BXW4 147 aa3.52□□□□□ -1.85
HMGB1P3-201ENST00000502802 CHMP4BQ9H444 224 aaKnown RBP3.52□□□□□ -1.85
HMGB1P3-201ENST00000502802 NOX3Q9HBY0 568 aa3.52□□□□□ -1.85
HMGB1P3-201ENST00000502802 RGS18Q9NS28 235 aa3.52□□□□□ -1.85
HMGB1P3-201ENST00000502802 SLC17A7Q9P2U7 560 aa3.52□□□□□ -1.85
HMGB1P3-201ENST00000502802 LOC285556D6RIA3 1793 aa3.52□□□□□ -1.85
HMGB1P3-201ENST00000502802 UNC80Q8N2C7 3258 aa3.52□□□□□ -1.85
HMGB1P3-201ENST00000502802 BAZ2AQ9UIF9 1905 aaKnown RBP3.52□□□□□ -1.85
HMGB1P3-201ENST00000502802 MAST2Q6P0Q8 1798 aa3.51□□□□□ -1.85
HMGB1P3-201ENST00000502802 TP53BP1Q12888 1972 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P3-201ENST00000502802 IGHV5-51A0A0C4DH38 117 aa3.51□□□□□ -1.85
HMGB1P3-201ENST00000502802 C11orf94C9JXX5 98 aa3.51□□□□□ -1.85
HMGB1P3-201ENST00000502802 H0Y9J4 135 aa3.51□□□□□ -1.85
HMGB1P3-201ENST00000502802 SLC25A14O95258 325 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P3-201ENST00000502802 HTR2CP28335 458 aa3.51□□□□□ -1.85
HMGB1P3-201ENST00000502802 ADORA1P30542 326 aa3.51□□□□□ -1.85
HMGB1P3-201ENST00000502802 MYCNOSP40205 109 aa3.51□□□□□ -1.85
HMGB1P3-201ENST00000502802 CDKN2DP55273 166 aa3.51□□□□□ -1.85
HMGB1P3-201ENST00000502802 OR2B8PP59922 312 aa3.51□□□□□ -1.85
HMGB1P3-201ENST00000502802 PAFAH1B2P68402 229 aa3.51□□□□□ -1.85
HMGB1P3-201ENST00000502802 SLC35B1P78383 322 aa3.51□□□□□ -1.85
HMGB1P3-201ENST00000502802 VAMP3Q15836 100 aa3.51□□□□□ -1.85
HMGB1P3-201ENST00000502802 CEMP1Q6PRD7 247 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P3-201ENST00000502802 TMPRSS11AQ6ZMR5 421 aa3.51□□□□□ -1.85
HMGB1P3-201ENST00000502802 PID1Q7Z2X4 250 aa3.51□□□□□ -1.85
HMGB1P3-201ENST00000502802 SNX20Q7Z614 316 aa3.51□□□□□ -1.85
HMGB1P3-201ENST00000502802 ERO1BQ86YB8 467 aa3.51□□□□□ -1.85
HMGB1P3-201ENST00000502802 RAB43Q86YS6 212 aa3.51□□□□□ -1.85
HMGB1P3-201ENST00000502802 MKXQ8IYA7 352 aa3.51□□□□□ -1.85
HMGB1P3-201ENST00000502802 WDR31Q8NA23 367 aa3.51□□□□□ -1.85
HMGB1P3-201ENST00000502802 CACNG8Q8WXS5 425 aa3.51□□□□□ -1.85
HMGB1P3-201ENST00000502802 TM4SF18Q96CE8 201 aa3.51□□□□□ -1.85
HMGB1P3-201ENST00000502802 CEP170P1Q96L14 293 aa3.51□□□□□ -1.85
HMGB1P3-201ENST00000502802 HINT2Q9BX68 163 aa3.51□□□□□ -1.85
HMGB1P3-201ENST00000502802 RBAKQ9NYW8 714 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P3-201ENST00000502802 GGA2Q9UJY4 613 aa3.51□□□□□ -1.85
HMGB1P3-201ENST00000502802 CES1P1Q9UKY3 287 aa3.51□□□□□ -1.85
HMGB1P3-201ENST00000502802 UBIAD1Q9Y5Z9 338 aa3.51□□□□□ -1.85
HMGB1P3-201ENST00000502802 COL11A1P12107 1806 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P3-201ENST00000502802 PARP14Q460N5 1801 aa3.51□□□□□ -1.85
HMGB1P3-201ENST00000502802 REV3LO60673 3130 aa3.5□□□□□ -1.85
HMGB1P3-201ENST00000502802 A0A0B4J2E0 115 aa3.5□□□□□ -1.85
HMGB1P3-201ENST00000502802 LINC00854A0A1B0GVQ3 168 aa3.5□□□□□ -1.85
HMGB1P3-201ENST00000502802 WI2-2373I1.2A0A1W2PRP0 233 aa3.5□□□□□ -1.85
HMGB1P3-201ENST00000502802 YKT6O15498 198 aa3.5□□□□□ -1.85
HMGB1P3-201ENST00000502802 RP2O75695 350 aa3.5□□□□□ -1.85
HMGB1P3-201ENST00000502802 CIAO1O76071 339 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms