RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 CDC14BO60729 498 aa11.86□□□□□ -0.51
GPC1-209ENST00000495100 GLULP15104 373 aa11.86□□□□□ -0.51
GPC1-209ENST00000495100 RAG2P55895 527 aa11.86□□□□□ -0.51
GPC1-209ENST00000495100 HERV-K104P61576 105 aa11.86□□□□□ -0.51
GPC1-209ENST00000495100 IGLV3-21P80748 117 aaPredicted RBP11.86□□□□□ -0.51
GPC1-209ENST00000495100 LTC4SQ16873 150 aa11.86□□□□□ -0.51
GPC1-209ENST00000495100 FBXW12Q6X9E4 464 aa11.86□□□□□ -0.51
GPC1-209ENST00000495100 TMEM229BQ8NBD8 167 aa11.86□□□□□ -0.51
GPC1-209ENST00000495100 OR10S1Q8NGN2 331 aa11.86□□□□□ -0.51
GPC1-209ENST00000495100 ABHD3Q8WU67 409 aa11.86□□□□□ -0.51
GPC1-209ENST00000495100 RDH5Q92781 318 aa11.86□□□□□ -0.51
GPC1-209ENST00000495100 FBXO7Q9Y3I1 522 aa11.86□□□□□ -0.51
GPC1-209ENST00000495100 KCNMB2Q9Y691 235 aa11.86□□□□□ -0.51
GPC1-209ENST00000495100 OR13C7P0DN81 318 aa11.85□□□□□ -0.51
GPC1-209ENST00000495100 TPT1P13693 172 aaKnown RBP11.85□□□□□ -0.51
GPC1-209ENST00000495100 FOSL2P15408 326 aa11.85□□□□□ -0.51
GPC1-209ENST00000495100 GABRA4P48169 554 aa11.85□□□□□ -0.51
GPC1-209ENST00000495100 LY6G6FQ5SQ64 297 aa11.85□□□□□ -0.51
GPC1-209ENST00000495100 SGPP2Q8IWX5 399 aa11.85□□□□□ -0.51
GPC1-209ENST00000495100 BVESQ8NE79 360 aa11.85□□□□□ -0.51
GPC1-209ENST00000495100 OR5M9Q8NGP3 310 aa11.85□□□□□ -0.51
GPC1-209ENST00000495100 SHDQ96IW2 340 aa11.85□□□□□ -0.51
GPC1-209ENST00000495100 OR10C1Q96KK4 312 aa11.85□□□□□ -0.51
GPC1-209ENST00000495100 ARHGAP21Q5T5U3 1957 aa11.85□□□□□ -0.51
GPC1-209ENST00000495100 PMS2P1A4D2B8 440 aa11.85□□□□□ -0.51
GPC1-209ENST00000495100 K7EPK0 472 aa11.85□□□□□ -0.51
GPC1-209ENST00000495100 EFSO43281 561 aa11.85□□□□□ -0.51
GPC1-209ENST00000495100 CPN1P15169 458 aa11.85□□□□□ -0.51
GPC1-209ENST00000495100 CNR1P21554 472 aa11.85□□□□□ -0.51
GPC1-209ENST00000495100 FHITP49789 147 aa11.85□□□□□ -0.51
GPC1-209ENST00000495100 CARD18P57730 90 aa11.85□□□□□ -0.51
GPC1-209ENST00000495100 THEM4Q5T1C6 240 aa11.85□□□□□ -0.51
GPC1-209ENST00000495100 SLC22A25Q6T423 547 aa11.85□□□□□ -0.51
GPC1-209ENST00000495100 ZNF813Q6ZN06 617 aa11.85□□□□□ -0.51
GPC1-209ENST00000495100 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.85□□□□□ -0.51
GPC1-209ENST00000495100 MCEMP1Q8IX19 187 aa11.85□□□□□ -0.51
GPC1-209ENST00000495100 FAM71E2Q8N5Q1 922 aa11.85□□□□□ -0.51
GPC1-209ENST00000495100 OR5T1Q8NG75 326 aa11.85□□□□□ -0.51
GPC1-209ENST00000495100 OR56B1Q8NGI3 324 aa11.85□□□□□ -0.51
GPC1-209ENST00000495100 RNF133Q8WVZ7 376 aa11.85□□□□□ -0.51
GPC1-209ENST00000495100 KCNK17Q96T54 332 aa11.85□□□□□ -0.51
GPC1-209ENST00000495100 SLX1AQ9BQ83 275 aa11.85□□□□□ -0.51
GPC1-209ENST00000495100 SLC5A7Q9GZV3 580 aa11.85□□□□□ -0.51
GPC1-209ENST00000495100 EXOSC3Q9NQT5 275 aaKnown RBP11.85□□□□□ -0.51
GPC1-209ENST00000495100 FBXO9Q9UK97 447 aaPredicted RBP11.85□□□□□ -0.51
GPC1-209ENST00000495100 UBE2J1Q9Y385 318 aaPredicted RBP11.85□□□□□ -0.51
GPC1-209ENST00000495100 SGCEO43556 437 aa11.85□□□□□ -0.51
GPC1-209ENST00000495100 HIST1H1DP16402 221 aaKnown RBP11.85□□□□□ -0.51
GPC1-209ENST00000495100 CEACAM16Q2WEN9 425 aa11.85□□□□□ -0.51
GPC1-209ENST00000495100 SNAI3Q3KNW1 292 aa11.85□□□□□ -0.51
GPC1-209ENST00000495100 RHBDD2Q6NTF9 364 aa11.85□□□□□ -0.51
GPC1-209ENST00000495100 SLC25A26Q70HW3 274 aa11.85□□□□□ -0.51
GPC1-209ENST00000495100 NAXDQ8IW45 347 aa11.85□□□□□ -0.51
GPC1-209ENST00000495100 PAQR4Q8N4S7 273 aaPredicted RBP11.85□□□□□ -0.51
GPC1-209ENST00000495100 NKAIN3Q8N8D7 197 aa11.85□□□□□ -0.51
GPC1-209ENST00000495100 OR11L1Q8NGX0 322 aa11.85□□□□□ -0.51
GPC1-209ENST00000495100 ST8SIA1Q92185 356 aa11.85□□□□□ -0.51
GPC1-209ENST00000495100 NKX6-2Q9C056 277 aaPredicted RBP11.85□□□□□ -0.51
GPC1-209ENST00000495100 A0A0D9SG52 128 aa11.84□□□□□ -0.51
GPC1-209ENST00000495100 ONECUT2O95948 504 aa11.84□□□□□ -0.51
GPC1-209ENST00000495100 HLA-HP01893 362 aa11.84□□□□□ -0.51
GPC1-209ENST00000495100 OR8U9P0C7N5 309 aa11.84□□□□□ -0.51
GPC1-209ENST00000495100 PTGFRP43088 359 aa11.84□□□□□ -0.51
GPC1-209ENST00000495100 OR2B11Q5JQS5 317 aa11.84□□□□□ -0.51
GPC1-209ENST00000495100 RGS7BPQ6MZT1 257 aaPredicted RBP11.84□□□□□ -0.51
GPC1-209ENST00000495100 C17orf78Q8N4C9 275 aa11.84□□□□□ -0.51
GPC1-209ENST00000495100 ZNF611Q8N823 705 aa11.84□□□□□ -0.51
GPC1-209ENST00000495100 OR51H1Q8NH63 302 aa11.84□□□□□ -0.51
GPC1-209ENST00000495100 MARC2Q969Z3 335 aa11.84□□□□□ -0.51
GPC1-209ENST00000495100 MVB12AQ96EY5 273 aa11.84□□□□□ -0.51
GPC1-209ENST00000495100 EML6Q6ZMW3 1958 aa11.84□□□□□ -0.51
GPC1-209ENST00000495100 IGKV3D-11A0A0A0MRZ8 115 aa11.84□□□□□ -0.51
GPC1-209ENST00000495100 KRBOX1C9JBD0 128 aa11.84□□□□□ -0.51
GPC1-209ENST00000495100 OR5H8P0DN80 308 aa11.84□□□□□ -0.51
GPC1-209ENST00000495100 MSR1P21757 451 aa11.84□□□□□ -0.51
GPC1-209ENST00000495100 FCGR2CP31995 323 aa11.84□□□□□ -0.51
GPC1-209ENST00000495100 SSR4P51571 173 aa11.84□□□□□ -0.51
GPC1-209ENST00000495100 PIGPP57054 158 aa11.84□□□□□ -0.51
GPC1-209ENST00000495100 RPS27AP62979 156 aaKnown RBP11.84□□□□□ -0.51
GPC1-209ENST00000495100 UBA52P62987 128 aaKnown RBP11.84□□□□□ -0.51
GPC1-209ENST00000495100 TAGLNQ01995 201 aaKnown RBP11.84□□□□□ -0.51
GPC1-209ENST00000495100 PHYHD1Q5SRE7 291 aa11.84□□□□□ -0.51
GPC1-209ENST00000495100 LPAR5Q9H1C0 372 aa11.84□□□□□ -0.51
GPC1-209ENST00000495100 AMDHD2Q9Y303 409 aa11.84□□□□□ -0.51
GPC1-209ENST00000495100 PUS1Q9Y606 427 aaKnown RBP eCLIP11.84□□□□□ -0.51
GPC1-209ENST00000495100 PLCE1Q9P212 2302 aa11.84□□□□□ -0.51
GPC1-209ENST00000495100 MGAQ8IWI9 3026 aa11.83□□□□□ -0.51
GPC1-209ENST00000495100 A0A0G2JMM0 328 aa11.83□□□□□ -0.51
GPC1-209ENST00000495100 A0A1W2PPB8 328 aa11.83□□□□□ -0.51
GPC1-209ENST00000495100 A0A1W2PRS3 328 aa11.83□□□□□ -0.51
GPC1-209ENST00000495100 KIR3DP1A8MWS1 328 aa11.83□□□□□ -0.51
GPC1-209ENST00000495100 GEMIN2O14893 280 aaKnown RBP11.83□□□□□ -0.51
GPC1-209ENST00000495100 TXNDC12O95881 172 aa11.83□□□□□ -0.51
GPC1-209ENST00000495100 CAMLGP49069 296 aa11.83□□□□□ -0.51
GPC1-209ENST00000495100 ZNF260Q3ZCT1 412 aa11.83□□□□□ -0.51
GPC1-209ENST00000495100 PAN3Q58A45 887 aaKnown RBP11.83□□□□□ -0.51
GPC1-209ENST00000495100 BAP18Q8IXM2 172 aa11.83□□□□□ -0.51
GPC1-209ENST00000495100 SLC43A2Q8N370 569 aa11.83□□□□□ -0.51
GPC1-209ENST00000495100 THRSPQ92748 146 aa11.83□□□□□ -0.51
GPC1-209ENST00000495100 ARL11Q969Q4 196 aa11.83□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms