RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 MAP2K3P46734 347 aa10.4□□□□□ -0.74
HSPG2-212ENST00000493940 NPY4RP50391 375 aa10.4□□□□□ -0.74
HSPG2-212ENST00000493940 RIDAP52758 137 aaKnown RBP10.4□□□□□ -0.74
HSPG2-212ENST00000493940 ACTG1P63261 375 aa10.4□□□□□ -0.74
HSPG2-212ENST00000493940 BAMBIQ13145 260 aa10.4□□□□□ -0.74
HSPG2-212ENST00000493940 SCGB2A2Q13296 93 aa10.4□□□□□ -0.74
HSPG2-212ENST00000493940 AWAT1Q58HT5 328 aa10.4□□□□□ -0.74
HSPG2-212ENST00000493940 ATPAF1Q5TC12 328 aaPredicted RBP10.4□□□□□ -0.74
HSPG2-212ENST00000493940 LCN1P1Q5VSP4 162 aa10.4□□□□□ -0.74
HSPG2-212ENST00000493940 ZNF788Q6ZQV5 615 aa10.4□□□□□ -0.74
HSPG2-212ENST00000493940 MOB3CQ70IA8 216 aa10.4□□□□□ -0.74
HSPG2-212ENST00000493940 ZDHHC23Q8IYP9 409 aa10.4□□□□□ -0.74
HSPG2-212ENST00000493940 OR14K1Q8NGZ2 314 aa10.4□□□□□ -0.74
HSPG2-212ENST00000493940 ANGPTL6Q8NI99 470 aa10.4□□□□□ -0.74
HSPG2-212ENST00000493940 ST8SIA4Q92187 359 aa10.4□□□□□ -0.74
HSPG2-212ENST00000493940 GCDHQ92947 438 aaPredicted RBP10.4□□□□□ -0.74
HSPG2-212ENST00000493940 ZNF488Q96MN9 340 aa10.4□□□□□ -0.74
HSPG2-212ENST00000493940 WDFY2Q96P53 400 aa10.4□□□□□ -0.74
HSPG2-212ENST00000493940 GAFA1Q96PS6 74 aa10.4□□□□□ -0.74
HSPG2-212ENST00000493940 RAB3IPQ96QF0 476 aaPredicted RBP10.4□□□□□ -0.74
HSPG2-212ENST00000493940 RTL8AQ9BWD3 113 aa10.4□□□□□ -0.74
HSPG2-212ENST00000493940 MROQ9BYG7 248 aa10.4□□□□□ -0.74
HSPG2-212ENST00000493940 RIBC2Q9H4K1 309 aa10.4□□□□□ -0.74
HSPG2-212ENST00000493940 PRDM13Q9H4Q3 707 aa10.4□□□□□ -0.74
HSPG2-212ENST00000493940 CLN6Q9NWW5 311 aa10.4□□□□□ -0.74
HSPG2-212ENST00000493940 HAO2Q9NYQ3 351 aa10.4□□□□□ -0.74
HSPG2-212ENST00000493940 IKZF2Q9UKS7 526 aa10.4□□□□□ -0.74
HSPG2-212ENST00000493940 IGKV1D-17A0A075B6S4 117 aa10.39□□□□□ -0.75
HSPG2-212ENST00000493940 ZNF816-ZNF321PA0A0X1KG74 233 aa10.39□□□□□ -0.75
HSPG2-212ENST00000493940 A0A1W2PQL4 384 aaPredicted RBP10.39□□□□□ -0.75
HSPG2-212ENST00000493940 P2RY10O00398 339 aa10.39□□□□□ -0.75
HSPG2-212ENST00000493940 NDUFA2O43678 99 aa10.39□□□□□ -0.75
HSPG2-212ENST00000493940 ZNF254O75437 659 aa10.39□□□□□ -0.75
HSPG2-212ENST00000493940 TOX4O94842 621 aa10.39□□□□□ -0.75
HSPG2-212ENST00000493940 RPP14O95059 124 aaKnown RBP10.39□□□□□ -0.75
HSPG2-212ENST00000493940 MUC1P15941 1255 aaPredicted RBP10.39□□□□□ -0.75
HSPG2-212ENST00000493940 ACTR3P61158 418 aa10.39□□□□□ -0.75
HSPG2-212ENST00000493940 IL5RAQ01344 420 aa10.39□□□□□ -0.75
HSPG2-212ENST00000493940 ZNF85Q03923 595 aa10.39□□□□□ -0.75
HSPG2-212ENST00000493940 MZT1Q08AG7 82 aa10.39□□□□□ -0.75
HSPG2-212ENST00000493940 DGUOKQ16854 277 aa10.39□□□□□ -0.75
HSPG2-212ENST00000493940 MICBQ29980 383 aa10.39□□□□□ -0.75
HSPG2-212ENST00000493940 CEACAM21Q3KPI0 293 aa10.39□□□□□ -0.75
HSPG2-212ENST00000493940 Q6ZSR3 168 aa10.39□□□□□ -0.75
HSPG2-212ENST00000493940 KCTD8Q6ZWB6 473 aa10.39□□□□□ -0.75
HSPG2-212ENST00000493940 PDZD9Q8IXQ8 264 aa10.39□□□□□ -0.75
HSPG2-212ENST00000493940 ELMOD2Q8IZ81 293 aa10.39□□□□□ -0.75
HSPG2-212ENST00000493940 BATF2Q8N1L9 274 aa10.39□□□□□ -0.75
HSPG2-212ENST00000493940 Q8N7P7 452 aa10.39□□□□□ -0.75
HSPG2-212ENST00000493940 OR10Z1Q8NGY1 313 aa10.39□□□□□ -0.75
HSPG2-212ENST00000493940 ASB17Q8WXJ9 295 aa10.39□□□□□ -0.75
HSPG2-212ENST00000493940 JMJD8Q96S16 334 aa10.39□□□□□ -0.75
HSPG2-212ENST00000493940 TEX12Q9BXU0 123 aa10.39□□□□□ -0.75
HSPG2-212ENST00000493940 ELL3Q9HB65 397 aaPredicted RBP10.39□□□□□ -0.75
HSPG2-212ENST00000493940 RPUSD1Q9UJJ7 312 aaKnown RBP10.39□□□□□ -0.75
HSPG2-212ENST00000493940 OR52A1Q9UKL2 312 aa10.39□□□□□ -0.75
HSPG2-212ENST00000493940 PIGLQ9Y2B2 252 aa10.39□□□□□ -0.75
HSPG2-212ENST00000493940 MAB21L2Q9Y586 359 aa10.39□□□□□ -0.75
HSPG2-212ENST00000493940 V9GYS6 101 aa10.39□□□□□ -0.75
HSPG2-212ENST00000493940 SLC22A31A6NKX4 558 aa10.38□□□□□ -0.75
HSPG2-212ENST00000493940 TMEM210A6NLX4 147 aa10.38□□□□□ -0.75
HSPG2-212ENST00000493940 ANXA2P2A6NMY6 339 aa10.38□□□□□ -0.75
HSPG2-212ENST00000493940 HOXA3O43365 443 aaPredicted RBP10.38□□□□□ -0.75
HSPG2-212ENST00000493940 SYNGR1O43759 233 aa10.38□□□□□ -0.75
HSPG2-212ENST00000493940 ALPLP05186 524 aa10.38□□□□□ -0.75
HSPG2-212ENST00000493940 HKR1P10072 659 aa10.38□□□□□ -0.75
HSPG2-212ENST00000493940 HTR1FP30939 366 aa10.38□□□□□ -0.75
HSPG2-212ENST00000493940 RIPPLY1Q0D2K3 151 aa10.38□□□□□ -0.75
HSPG2-212ENST00000493940 IKZF1Q13422 519 aa10.38□□□□□ -0.75
HSPG2-212ENST00000493940 KCNJ8Q15842 424 aa10.38□□□□□ -0.75
HSPG2-212ENST00000493940 ODF4Q2M2E3 257 aa10.38□□□□□ -0.75
HSPG2-212ENST00000493940 ZIK1Q3SY52 487 aaPredicted RBP10.38□□□□□ -0.75
HSPG2-212ENST00000493940 CD276Q5ZPR3 534 aa10.38□□□□□ -0.75
HSPG2-212ENST00000493940 TMEM42Q69YG0 159 aa10.38□□□□□ -0.75
HSPG2-212ENST00000493940 PRSS35Q8N3Z0 413 aa10.38□□□□□ -0.75
HSPG2-212ENST00000493940 PIP4P2Q8N4L2 257 aa10.38□□□□□ -0.75
HSPG2-212ENST00000493940 AQP3Q92482 292 aa10.38□□□□□ -0.75
HSPG2-212ENST00000493940 RORBQ92753 470 aa10.38□□□□□ -0.75
HSPG2-212ENST00000493940 LHX4Q969G2 390 aa10.38□□□□□ -0.75
HSPG2-212ENST00000493940 SLC29A1Q99808 456 aa10.38□□□□□ -0.75
HSPG2-212ENST00000493940 GPR173Q9NS66 373 aa10.38□□□□□ -0.75
HSPG2-212ENST00000493940 TNFRSF19Q9NS68 423 aa10.38□□□□□ -0.75
HSPG2-212ENST00000493940 H2AFY2Q9P0M6 372 aaPredicted RBP10.38□□□□□ -0.75
HSPG2-212ENST00000493940 DNAJB11Q9UBS4 358 aa10.38□□□□□ -0.75
HSPG2-212ENST00000493940 ZNF391Q9UJN7 358 aa10.38□□□□□ -0.75
HSPG2-212ENST00000493940 ZNF222Q9UK12 451 aa10.38□□□□□ -0.75
HSPG2-212ENST00000493940 GTF2A1LQ9UNN4 478 aa10.38□□□□□ -0.75
HSPG2-212ENST00000493940 TMEM14AQ9Y6G1 99 aa10.38□□□□□ -0.75
HSPG2-212ENST00000493940 R4GMQ9 66 aa10.38□□□□□ -0.75
HSPG2-212ENST00000493940 ZNF670-ZNF695F2Z2N8 137 aa10.37□□□□□ -0.75
HSPG2-212ENST00000493940 LOC110117498-PIK3R3F6TDL0 507 aa10.37□□□□□ -0.75
HSPG2-212ENST00000493940 EI24O14681 340 aa10.37□□□□□ -0.75
HSPG2-212ENST00000493940 ENTPD6O75354 484 aa10.37□□□□□ -0.75
HSPG2-212ENST00000493940 RNASE1P07998 156 aaKnown RBP10.37□□□□□ -0.75
HSPG2-212ENST00000493940 PSG2P11465 335 aa10.37□□□□□ -0.75
HSPG2-212ENST00000493940 FCGR1AP12314 374 aa10.37□□□□□ -0.75
HSPG2-212ENST00000493940 KIR3DL2P43630 455 aa10.37□□□□□ -0.75
HSPG2-212ENST00000493940 CEBPDP49716 269 aaPredicted RBP10.37□□□□□ -0.75
HSPG2-212ENST00000493940 GNG3P63215 75 aa10.37□□□□□ -0.75
HSPG2-212ENST00000493940 KLRD1Q13241 179 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms