RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 ASB8Q9H765 288 aa3.42□□□□□ -1.86
SSX2IP-208ENST00000490476 BEX1Q9HBH7 125 aa3.42□□□□□ -1.86
SSX2IP-208ENST00000490476 CTSFQ9UBX1 484 aa3.42□□□□□ -1.86
SSX2IP-208ENST00000490476 HMGXB4Q9UGU5 601 aa3.42□□□□□ -1.86
SSX2IP-208ENST00000490476 NAP1L2Q9ULW6 460 aaPredicted RBP3.42□□□□□ -1.86
SSX2IP-208ENST00000490476 KLF13Q9Y2Y9 288 aaPredicted RBP3.42□□□□□ -1.86
SSX2IP-208ENST00000490476 TMED5Q9Y3A6 229 aa3.42□□□□□ -1.86
SSX2IP-208ENST00000490476 SMAD5-AS1Q9Y6J3 95 aa3.42□□□□□ -1.86
SSX2IP-208ENST00000490476 A0A0G2JLM5 398 aa3.41□□□□□ -1.86
SSX2IP-208ENST00000490476 PES1O00541 588 aaKnown RBP3.41□□□□□ -1.86
SSX2IP-208ENST00000490476 DNALI1O14645 258 aaPredicted RBP3.41□□□□□ -1.86
SSX2IP-208ENST00000490476 HDAC3O15379 428 aa3.41□□□□□ -1.86
SSX2IP-208ENST00000490476 HCRTR1O43613 425 aa3.41□□□□□ -1.86
SSX2IP-208ENST00000490476 SUPT7LO94864 414 aa3.41□□□□□ -1.86
SSX2IP-208ENST00000490476 ASS1P00966 412 aaKnown RBP3.41□□□□□ -1.86
SSX2IP-208ENST00000490476 ICAM2P13598 275 aa3.41□□□□□ -1.86
SSX2IP-208ENST00000490476 TBPP20226 339 aa3.41□□□□□ -1.86
SSX2IP-208ENST00000490476 BTCP35070 178 aa3.41□□□□□ -1.86
SSX2IP-208ENST00000490476 RGRP47804 291 aa3.41□□□□□ -1.86
SSX2IP-208ENST00000490476 ZNF763Q0D2J5 394 aa3.41□□□□□ -1.86
SSX2IP-208ENST00000490476 ALKBH6Q3KRA9 238 aa3.41□□□□□ -1.86
SSX2IP-208ENST00000490476 TRIM40Q6P9F5 258 aa3.41□□□□□ -1.86
SSX2IP-208ENST00000490476 CNIH2Q6PI25 160 aa3.41□□□□□ -1.86
SSX2IP-208ENST00000490476 COX15Q7KZN9 410 aa3.41□□□□□ -1.86
SSX2IP-208ENST00000490476 PIANPQ8IYJ0 282 aa3.41□□□□□ -1.86
SSX2IP-208ENST00000490476 PNKDQ8N490 385 aa3.41□□□□□ -1.86
SSX2IP-208ENST00000490476 B3GNT7Q8NFL0 401 aa3.41□□□□□ -1.86
SSX2IP-208ENST00000490476 OR2L5Q8NG80 312 aa3.41□□□□□ -1.86
SSX2IP-208ENST00000490476 PLPPR1Q8TBJ4 325 aa3.41□□□□□ -1.86
SSX2IP-208ENST00000490476 C7orf33Q8WU49 177 aa3.41□□□□□ -1.86
SSX2IP-208ENST00000490476 SERPINB11Q96P15 392 aa3.41□□□□□ -1.86
SSX2IP-208ENST00000490476 PANX1Q96RD7 426 aa3.41□□□□□ -1.86
SSX2IP-208ENST00000490476 FAIM2Q9BWQ8 316 aa3.41□□□□□ -1.86
SSX2IP-208ENST00000490476 ROGDIQ9GZN7 287 aa3.41□□□□□ -1.86
SSX2IP-208ENST00000490476 MFFQ9GZY8 342 aa3.41□□□□□ -1.86
SSX2IP-208ENST00000490476 SLC25A22Q9H936 323 aa3.41□□□□□ -1.86
SSX2IP-208ENST00000490476 SIAEQ9HAT2 523 aa3.41□□□□□ -1.86
SSX2IP-208ENST00000490476 NEK6Q9HC98 313 aa3.41□□□□□ -1.86
SSX2IP-208ENST00000490476 SLC40A1Q9NP59 571 aa3.41□□□□□ -1.86
SSX2IP-208ENST00000490476 QPCTLQ9NXS2 382 aa3.41□□□□□ -1.86
SSX2IP-208ENST00000490476 CRCT1Q9UGL9 99 aa3.41□□□□□ -1.86
SSX2IP-208ENST00000490476 C3orf18Q9UK00 162 aa3.41□□□□□ -1.86
SSX2IP-208ENST00000490476 PITPNC1Q9UKF7 332 aa3.41□□□□□ -1.86
SSX2IP-208ENST00000490476 PCYT1BQ9Y5K3 369 aaPredicted RBP3.41□□□□□ -1.86
SSX2IP-208ENST00000490476 A0A0D9SEW6 157 aa3.4□□□□□ -1.87
SSX2IP-208ENST00000490476 FAM231BA6NCW3 169 aa3.4□□□□□ -1.87
SSX2IP-208ENST00000490476 FAM166BA8MTA8 275 aa3.4□□□□□ -1.87
SSX2IP-208ENST00000490476 C9JVG2 144 aa3.4□□□□□ -1.87
SSX2IP-208ENST00000490476 EPPINO95925 133 aa3.4□□□□□ -1.87
SSX2IP-208ENST00000490476 ANXA5P08758 320 aa3.4□□□□□ -1.87
SSX2IP-208ENST00000490476 LONP1P36776 959 aaKnown RBP3.4□□□□□ -1.87
SSX2IP-208ENST00000490476 DLX1P56177 255 aa3.4□□□□□ -1.87
SSX2IP-208ENST00000490476 ERVK-25P63136 954 aa3.4□□□□□ -1.87
SSX2IP-208ENST00000490476 NDPQ00604 133 aa3.4□□□□□ -1.87
SSX2IP-208ENST00000490476 ORC2Q13416 577 aaPredicted RBP3.4□□□□□ -1.87
SSX2IP-208ENST00000490476 MRPL23Q16540 153 aaKnown RBP3.4□□□□□ -1.87
SSX2IP-208ENST00000490476 IL17AQ16552 155 aa3.4□□□□□ -1.87
SSX2IP-208ENST00000490476 ZNF836Q6ZNA1 936 aa3.4□□□□□ -1.87
SSX2IP-208ENST00000490476 RNF165Q6ZSG1 346 aa3.4□□□□□ -1.87
SSX2IP-208ENST00000490476 NT5DC3Q86UY8 548 aa3.4□□□□□ -1.87
SSX2IP-208ENST00000490476 THOC6Q86W42 341 aaKnown RBP3.4□□□□□ -1.87
SSX2IP-208ENST00000490476 OOSP2Q86WS3 158 aa3.4□□□□□ -1.87
SSX2IP-208ENST00000490476 PRSS58Q8IYP2 241 aa3.4□□□□□ -1.87
SSX2IP-208ENST00000490476 PUSL1Q8N0Z8 303 aaKnown RBP3.4□□□□□ -1.87
SSX2IP-208ENST00000490476 TEX29Q8N6K0 151 aa3.4□□□□□ -1.87
SSX2IP-208ENST00000490476 ASZ1Q8WWH4 475 aa3.4□□□□□ -1.87
SSX2IP-208ENST00000490476 UCN3Q969E3 161 aa3.4□□□□□ -1.87
SSX2IP-208ENST00000490476 ISG20Q96AZ6 181 aaKnown RBP3.4□□□□□ -1.87
SSX2IP-208ENST00000490476 LRRC58Q96CX6 371 aa3.4□□□□□ -1.87
SSX2IP-208ENST00000490476 BTN2A3PQ96KV6 586 aa3.4□□□□□ -1.87
SSX2IP-208ENST00000490476 RARRES2Q99969 163 aa3.4□□□□□ -1.87
SSX2IP-208ENST00000490476 MRPL47Q9HD33 250 aaKnown RBP3.4□□□□□ -1.87
SSX2IP-208ENST00000490476 DDX19AQ9NUU7 478 aaKnown RBP3.4□□□□□ -1.87
SSX2IP-208ENST00000490476 HRASLS2Q9NWW9 162 aa3.4□□□□□ -1.87
SSX2IP-208ENST00000490476 DNAH2Q9P225 4427 aa3.4□□□□□ -1.87
SSX2IP-208ENST00000490476 DDX19BQ9UMR2 479 aa3.4□□□□□ -1.87
SSX2IP-208ENST00000490476 VPS13DQ5THJ4 4388 aa3.39□□□□□ -1.87
SSX2IP-208ENST00000490476 A0A1B0GX78 115 aa3.39□□□□□ -1.87
SSX2IP-208ENST00000490476 TSPAN11A1L157 253 aa3.39□□□□□ -1.87
SSX2IP-208ENST00000490476 CLPSL1A2RUU4 121 aa3.39□□□□□ -1.87
SSX2IP-208ENST00000490476 A8MUA0 341 aa3.39□□□□□ -1.87
SSX2IP-208ENST00000490476 PDZK1P1A8MUH7 402 aa3.39□□□□□ -1.87
SSX2IP-208ENST00000490476 C12orf77C9JDV5 145 aa3.39□□□□□ -1.87
SSX2IP-208ENST00000490476 NDUFS8O00217 210 aa3.39□□□□□ -1.87
SSX2IP-208ENST00000490476 DLGAP1O14490 977 aa3.39□□□□□ -1.87
SSX2IP-208ENST00000490476 EMC8O43402 210 aa3.39□□□□□ -1.87
SSX2IP-208ENST00000490476 NEMFO60524 1076 aa3.39□□□□□ -1.87
SSX2IP-208ENST00000490476 CDH16O75309 829 aa3.39□□□□□ -1.87
SSX2IP-208ENST00000490476 CLDN11O75508 207 aa3.39□□□□□ -1.87
SSX2IP-208ENST00000490476 TNFSF13O75888 250 aa3.39□□□□□ -1.87
SSX2IP-208ENST00000490476 OR2J3O76001 311 aa3.39□□□□□ -1.87
SSX2IP-208ENST00000490476 CD8AP01732 235 aa3.39□□□□□ -1.87
SSX2IP-208ENST00000490476 FGGP02679 453 aa3.39□□□□□ -1.87
SSX2IP-208ENST00000490476 FTH1P02794 183 aa3.39□□□□□ -1.87
SSX2IP-208ENST00000490476 C2P06681 752 aa3.39□□□□□ -1.87
SSX2IP-208ENST00000490476 TCN1P20061 433 aaPredicted RBP3.39□□□□□ -1.87
SSX2IP-208ENST00000490476 FUT3P21217 361 aa3.39□□□□□ -1.87
SSX2IP-208ENST00000490476 GALP22466 123 aa3.39□□□□□ -1.87
SSX2IP-208ENST00000490476 TEAD1P28347 426 aa3.39□□□□□ -1.87
SSX2IP-208ENST00000490476 CCT6AP40227 531 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms