RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 OR5B21A6NL26 309 aa11.91□□□□□ -0.5
CLDN11-207ENST00000486975 MITFO75030 526 aaPredicted RBP11.91□□□□□ -0.5
CLDN11-207ENST00000486975 TOX4O94842 621 aa11.91□□□□□ -0.5
CLDN11-207ENST00000486975 SFTPBP07988 381 aa11.91□□□□□ -0.5
CLDN11-207ENST00000486975 TGM4P49221 684 aa11.91□□□□□ -0.5
CLDN11-207ENST00000486975 RIDAP52758 137 aaKnown RBP11.91□□□□□ -0.5
CLDN11-207ENST00000486975 C1orf146Q5VVC0 180 aa11.91□□□□□ -0.5
CLDN11-207ENST00000486975 ZNF322Q6U7Q0 402 aaPredicted RBP11.91□□□□□ -0.5
CLDN11-207ENST00000486975 GID4Q8IVV7 300 aa11.91□□□□□ -0.5
CLDN11-207ENST00000486975 TCEANCQ8N8B7 351 aa11.91□□□□□ -0.5
CLDN11-207ENST00000486975 SCCPDHQ8NBX0 429 aa11.91□□□□□ -0.5
CLDN11-207ENST00000486975 LY6G5BQ8NDX9 201 aa11.91□□□□□ -0.5
CLDN11-207ENST00000486975 FAM81AQ8TBF8 368 aa11.91□□□□□ -0.5
CLDN11-207ENST00000486975 PIGCQ92535 297 aa11.91□□□□□ -0.5
CLDN11-207ENST00000486975 RNF170Q96K19 258 aa11.91□□□□□ -0.5
CLDN11-207ENST00000486975 RAB3IPQ96QF0 476 aaPredicted RBP11.91□□□□□ -0.5
CLDN11-207ENST00000486975 HIST1H2AAQ96QV6 131 aa11.91□□□□□ -0.5
CLDN11-207ENST00000486975 CCL13Q99616 98 aa11.91□□□□□ -0.5
CLDN11-207ENST00000486975 PCGF1Q9BSM1 259 aa11.91□□□□□ -0.5
CLDN11-207ENST00000486975 FGF23Q9GZV9 251 aaPredicted RBP11.91□□□□□ -0.5
CLDN11-207ENST00000486975 PBOV1Q9GZY1 135 aa11.91□□□□□ -0.5
CLDN11-207ENST00000486975 RASSF4Q9H2L5 321 aa11.91□□□□□ -0.5
CLDN11-207ENST00000486975 ADGRL4Q9HBW9 690 aa11.91□□□□□ -0.5
CLDN11-207ENST00000486975 H2AFY2Q9P0M6 372 aaPredicted RBP11.91□□□□□ -0.5
CLDN11-207ENST00000486975 KPTNQ9Y664 436 aa11.91□□□□□ -0.5
CLDN11-207ENST00000486975 CENPVL3A0A0U1RRI6 287 aa11.9□□□□□ -0.5
CLDN11-207ENST00000486975 PSMD9O00233 223 aa11.9□□□□□ -0.5
CLDN11-207ENST00000486975 SRSF10O75494 262 aaKnown RBP11.9□□□□□ -0.5
CLDN11-207ENST00000486975 AMY2BP19961 511 aa11.9□□□□□ -0.5
CLDN11-207ENST00000486975 ACTR3P61158 418 aa11.9□□□□□ -0.5
CLDN11-207ENST00000486975 GNG3P63215 75 aa11.9□□□□□ -0.5
CLDN11-207ENST00000486975 EGR3Q06889 387 aa11.9□□□□□ -0.5
CLDN11-207ENST00000486975 RIPPLY1Q0D2K3 151 aa11.9□□□□□ -0.5
CLDN11-207ENST00000486975 DEFB112Q30KQ8 113 aa11.9□□□□□ -0.5
CLDN11-207ENST00000486975 CEACAM21Q3KPI0 293 aa11.9□□□□□ -0.5
CLDN11-207ENST00000486975 BRD3OSQ6XYD6 125 aa11.9□□□□□ -0.5
CLDN11-207ENST00000486975 TMEM86BQ8N661 226 aa11.9□□□□□ -0.5
CLDN11-207ENST00000486975 FAM216BQ8N7L0 139 aa11.9□□□□□ -0.5
CLDN11-207ENST00000486975 OR5A2Q8NGI9 324 aa11.9□□□□□ -0.5
CLDN11-207ENST00000486975 C8orf46Q8TAG6 207 aa11.9□□□□□ -0.5
CLDN11-207ENST00000486975 ST8SIA4Q92187 359 aa11.9□□□□□ -0.5
CLDN11-207ENST00000486975 RPL3LQ92901 407 aaKnown RBP11.9□□□□□ -0.5
CLDN11-207ENST00000486975 DUX5Q96PT3 197 aa11.9□□□□□ -0.5
CLDN11-207ENST00000486975 CIB1Q99828 191 aa11.9□□□□□ -0.5
CLDN11-207ENST00000486975 OSBPL10Q9BXB5 764 aa11.9□□□□□ -0.5
CLDN11-207ENST00000486975 CNTD2Q9H8S5 307 aa11.9□□□□□ -0.5
CLDN11-207ENST00000486975 GPR84Q9NQS5 396 aa11.9□□□□□ -0.5
CLDN11-207ENST00000486975 CLN6Q9NWW5 311 aa11.9□□□□□ -0.5
CLDN11-207ENST00000486975 IKZF2Q9UKS7 526 aa11.9□□□□□ -0.5
CLDN11-207ENST00000486975 SOX21Q9Y651 276 aaPredicted RBP11.9□□□□□ -0.5
CLDN11-207ENST00000486975 A0A1B0GW55 424 aa11.89□□□□□ -0.51
CLDN11-207ENST00000486975 M0R129 80 aa11.89□□□□□ -0.51
CLDN11-207ENST00000486975 NDUFB3O43676 98 aa11.89□□□□□ -0.51
CLDN11-207ENST00000486975 MTRF1O75570 445 aaKnown RBP11.89□□□□□ -0.51
CLDN11-207ENST00000486975 DHRS3O75911 302 aa11.89□□□□□ -0.51
CLDN11-207ENST00000486975 TTRP02766 147 aa11.89□□□□□ -0.51
CLDN11-207ENST00000486975 DUX4L2P0CJ85 424 aa11.89□□□□□ -0.51
CLDN11-207ENST00000486975 DUX4L3P0CJ86 424 aa11.89□□□□□ -0.51
CLDN11-207ENST00000486975 DUX4L4P0CJ87 422 aa11.89□□□□□ -0.51
CLDN11-207ENST00000486975 DUX4L5P0CJ88 424 aa11.89□□□□□ -0.51
CLDN11-207ENST00000486975 DUX4L6P0CJ89 424 aa11.89□□□□□ -0.51
CLDN11-207ENST00000486975 DUX4L7P0CJ90 424 aa11.89□□□□□ -0.51
CLDN11-207ENST00000486975 CXCR4P61073 352 aa11.89□□□□□ -0.51
CLDN11-207ENST00000486975 MFGE8Q08431 387 aaPredicted RBP11.89□□□□□ -0.51
CLDN11-207ENST00000486975 CDONQ4KMG0 1287 aa11.89□□□□□ -0.51
CLDN11-207ENST00000486975 LRRC10Q5BKY1 277 aa11.89□□□□□ -0.51
CLDN11-207ENST00000486975 DUX4L9Q6RFH8 374 aaPredicted RBP11.89□□□□□ -0.51
CLDN11-207ENST00000486975 METAP1DQ6UB28 335 aaPredicted RBP11.89□□□□□ -0.51
CLDN11-207ENST00000486975 ZNF788Q6ZQV5 615 aa11.89□□□□□ -0.51
CLDN11-207ENST00000486975 Q6ZSR3 168 aa11.89□□□□□ -0.51
CLDN11-207ENST00000486975 KCTD8Q6ZWB6 473 aa11.89□□□□□ -0.51
CLDN11-207ENST00000486975 BCDIN3DQ7Z5W3 292 aaKnown RBP11.89□□□□□ -0.51
CLDN11-207ENST00000486975 AMIGO2Q86SJ2 522 aa11.89□□□□□ -0.51
CLDN11-207ENST00000486975 SLC35F2Q8IXU6 374 aa11.89□□□□□ -0.51
CLDN11-207ENST00000486975 ELMOD2Q8IZ81 293 aa11.89□□□□□ -0.51
CLDN11-207ENST00000486975 KIR3DL3Q8N743 410 aa11.89□□□□□ -0.51
CLDN11-207ENST00000486975 SGMS2Q8NHU3 365 aa11.89□□□□□ -0.51
CLDN11-207ENST00000486975 ANGPTL6Q8NI99 470 aa11.89□□□□□ -0.51
CLDN11-207ENST00000486975 OR51E1Q8TCB6 317 aa11.89□□□□□ -0.51
CLDN11-207ENST00000486975 GATAD2BQ8WXI9 593 aa11.89□□□□□ -0.51
CLDN11-207ENST00000486975 LRTOMTQ8WZ04 291 aa11.89□□□□□ -0.51
CLDN11-207ENST00000486975 SEH1LQ96EE3 360 aa11.89□□□□□ -0.51
CLDN11-207ENST00000486975 CENPNQ96H22 339 aaPredicted RBP11.89□□□□□ -0.51
CLDN11-207ENST00000486975 FAM71F1Q96KD3 344 aaPredicted RBP11.89□□□□□ -0.51
CLDN11-207ENST00000486975 ZNF747Q9BV97 191 aa11.89□□□□□ -0.51
CLDN11-207ENST00000486975 GABARAPL3Q9BY60 117 aa11.89□□□□□ -0.51
CLDN11-207ENST00000486975 WDR13Q9H1Z4 485 aa11.89□□□□□ -0.51
CLDN11-207ENST00000486975 OR51I2Q9H344 312 aa11.89□□□□□ -0.51
CLDN11-207ENST00000486975 DNAJB11Q9UBS4 358 aa11.89□□□□□ -0.51
CLDN11-207ENST00000486975 DUX4Q9UBX2 424 aa11.89□□□□□ -0.51
CLDN11-207ENST00000486975 WARS2Q9UGM6 360 aaKnown RBP11.89□□□□□ -0.51
CLDN11-207ENST00000486975 ENPP5Q9UJA9 477 aa11.89□□□□□ -0.51
CLDN11-207ENST00000486975 IGHV1-69DA0A0B4J2H0 117 aa11.88□□□□□ -0.51
CLDN11-207ENST00000486975 A0A1B0GVI7 797 aa11.88□□□□□ -0.51
CLDN11-207ENST00000486975 MDFIC2A0A1B0GVS7 189 aa11.88□□□□□ -0.51
CLDN11-207ENST00000486975 NKX6-3A6NJ46 265 aa11.88□□□□□ -0.51
CLDN11-207ENST00000486975 DHRS7CA6NNS2 312 aa11.88□□□□□ -0.51
CLDN11-207ENST00000486975 ZNF732B4DXR9 585 aa11.88□□□□□ -0.51
CLDN11-207ENST00000486975 ZNF670-ZNF695F2Z2N8 137 aa11.88□□□□□ -0.51
CLDN11-207ENST00000486975 LOC110117498-PIK3R3F6TDL0 507 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms