RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 NCBP2LA6PVI3 153 aaKnown RBP4.85□□□□□ -1.63
HDAC3-206ENST00000471968 BLOC1S5-TXNDC5H3BN57 136 aa4.85□□□□□ -1.63
HDAC3-206ENST00000471968 RER1O15258 196 aa4.85□□□□□ -1.63
HDAC3-206ENST00000471968 FMO6PO60774 539 aa4.85□□□□□ -1.63
HDAC3-206ENST00000471968 RBP4P02753 201 aa4.85□□□□□ -1.63
HDAC3-206ENST00000471968 HSPB1P04792 205 aaKnown RBP4.85□□□□□ -1.63
HDAC3-206ENST00000471968 HIST1H2ABP04908 130 aa4.85□□□□□ -1.63
HDAC3-206ENST00000471968 SBK3P0C264 359 aa4.85□□□□□ -1.63
HDAC3-206ENST00000471968 NR2C1P13056 603 aa4.85□□□□□ -1.63
HDAC3-206ENST00000471968 OTX1P32242 354 aaPredicted RBP4.85□□□□□ -1.63
HDAC3-206ENST00000471968 SERPINB5P36952 375 aa4.85□□□□□ -1.63
HDAC3-206ENST00000471968 UGT2B15P54855 530 aa4.85□□□□□ -1.63
HDAC3-206ENST00000471968 HAMPP81172 84 aa4.85□□□□□ -1.63
HDAC3-206ENST00000471968 AQP6Q13520 282 aa4.85□□□□□ -1.63
HDAC3-206ENST00000471968 ZNF74Q16587 644 aa4.85□□□□□ -1.63
HDAC3-206ENST00000471968 PGS1Q32NB8 556 aa4.85□□□□□ -1.63
HDAC3-206ENST00000471968 TPTE2P1Q5T6R2 138 aa4.85□□□□□ -1.63
HDAC3-206ENST00000471968 IL34Q6ZMJ4 242 aa4.85□□□□□ -1.63
HDAC3-206ENST00000471968 ZBTB49Q6ZSB9 765 aa4.85□□□□□ -1.63
HDAC3-206ENST00000471968 HIST3H2AQ7L7L0 130 aa4.85□□□□□ -1.63
HDAC3-206ENST00000471968 NR2C2APQ86WQ0 139 aa4.85□□□□□ -1.63
HDAC3-206ENST00000471968 THNSL2Q86YJ6 484 aa4.85□□□□□ -1.63
HDAC3-206ENST00000471968 LAX1Q8IWV1 398 aa4.85□□□□□ -1.63
HDAC3-206ENST00000471968 C6orf223Q8N319 242 aa4.85□□□□□ -1.63
HDAC3-206ENST00000471968 STPG3Q8N7X2 389 aa4.85□□□□□ -1.63
HDAC3-206ENST00000471968 LSMEM1Q8N8F7 131 aa4.85□□□□□ -1.63
HDAC3-206ENST00000471968 OR2T11Q8NH01 316 aa4.85□□□□□ -1.63
HDAC3-206ENST00000471968 HIST1H2ACQ93077 130 aa4.85□□□□□ -1.63
HDAC3-206ENST00000471968 SDSLQ96GA7 329 aa4.85□□□□□ -1.63
HDAC3-206ENST00000471968 RBP7Q96R05 134 aa4.85□□□□□ -1.63
HDAC3-206ENST00000471968 MRPL57Q9BQC6 102 aaKnown RBP4.85□□□□□ -1.63
HDAC3-206ENST00000471968 TMEM133Q9H2Q1 129 aa4.85□□□□□ -1.63
HDAC3-206ENST00000471968 MRPL46Q9H2W6 279 aaKnown RBP4.85□□□□□ -1.63
HDAC3-206ENST00000471968 PTTG2Q9NZH5 202 aa4.85□□□□□ -1.63
HDAC3-206ENST00000471968 PYCARDQ9ULZ3 195 aa4.85□□□□□ -1.63
HDAC3-206ENST00000471968 SESN1Q9Y6P5 492 aa4.85□□□□□ -1.63
HDAC3-206ENST00000471968 FAM90A18PA6NE21 464 aa4.84□□□□□ -1.63
HDAC3-206ENST00000471968 ARRDC5A6NEK1 342 aa4.84□□□□□ -1.63
HDAC3-206ENST00000471968 FAM90A16PA6NEW6 464 aa4.84□□□□□ -1.63
HDAC3-206ENST00000471968 FAM90A20PA6NIJ5 464 aa4.84□□□□□ -1.63
HDAC3-206ENST00000471968 FAM183AA6NL82 134 aa4.84□□□□□ -1.63
HDAC3-206ENST00000471968 FAM90A9PA6NNJ1 464 aa4.84□□□□□ -1.63
HDAC3-206ENST00000471968 ZNF785A8K8V0 405 aa4.84□□□□□ -1.63
HDAC3-206ENST00000471968 FAM90A12PA8MX19 464 aa4.84□□□□□ -1.63
HDAC3-206ENST00000471968 FAM90A5PA8MXJ8 464 aa4.84□□□□□ -1.63
HDAC3-206ENST00000471968 ATP8B1O43520 1251 aa4.84□□□□□ -1.63
HDAC3-206ENST00000471968 OXTP01178 125 aa4.84□□□□□ -1.63
HDAC3-206ENST00000471968 IFNA21P01568 189 aa4.84□□□□□ -1.63
HDAC3-206ENST00000471968 IFNA17P01571 189 aa4.84□□□□□ -1.63
HDAC3-206ENST00000471968 IGHV3-11P01762 117 aa4.84□□□□□ -1.63
HDAC3-206ENST00000471968 LCATP04180 440 aa4.84□□□□□ -1.63
HDAC3-206ENST00000471968 GSTA1P08263 222 aa4.84□□□□□ -1.63
HDAC3-206ENST00000471968 GSTA2P09210 222 aa4.84□□□□□ -1.63
HDAC3-206ENST00000471968 FAM90A15PP0C7V4 464 aa4.84□□□□□ -1.63
HDAC3-206ENST00000471968 FAM90A13PP0C7W8 464 aa4.84□□□□□ -1.63
HDAC3-206ENST00000471968 FAM90A14PP0C7W9 464 aa4.84□□□□□ -1.63
HDAC3-206ENST00000471968 FAM90A24PP0C7X0 464 aa4.84□□□□□ -1.63
HDAC3-206ENST00000471968 OR5H8P0DN80 308 aa4.84□□□□□ -1.63
HDAC3-206ENST00000471968 CTLA4P16410 223 aa4.84□□□□□ -1.63
HDAC3-206ENST00000471968 GLRA1P23415 457 aa4.84□□□□□ -1.63
HDAC3-206ENST00000471968 GNALP38405 381 aa4.84□□□□□ -1.63
HDAC3-206ENST00000471968 SERPINB8P50452 374 aa4.84□□□□□ -1.63
HDAC3-206ENST00000471968 BDH1Q02338 343 aa4.84□□□□□ -1.63
HDAC3-206ENST00000471968 CCDC144NLQ6NUI1 221 aa4.84□□□□□ -1.63
HDAC3-206ENST00000471968 NANOGNBQ7Z5D8 188 aa4.84□□□□□ -1.63
HDAC3-206ENST00000471968 THAP5Q7Z6K1 395 aa4.84□□□□□ -1.63
HDAC3-206ENST00000471968 OR9G4Q8NGQ1 327 aa4.84□□□□□ -1.63
HDAC3-206ENST00000471968 TRMT10AQ8TBZ6 339 aaKnown RBP4.84□□□□□ -1.63
HDAC3-206ENST00000471968 PYROXD1Q8WU10 500 aa4.84□□□□□ -1.63
HDAC3-206ENST00000471968 RPL3LQ92901 407 aaKnown RBP4.84□□□□□ -1.63
HDAC3-206ENST00000471968 TMEM19Q96HH6 336 aa4.84□□□□□ -1.63
HDAC3-206ENST00000471968 MYCBPQ99417 103 aaPredicted RBP4.84□□□□□ -1.63
HDAC3-206ENST00000471968 HSPB9Q9BQS6 159 aa4.84□□□□□ -1.63
HDAC3-206ENST00000471968 TMEM43Q9BTV4 400 aa4.84□□□□□ -1.63
HDAC3-206ENST00000471968 RNF126Q9BV68 326 aa4.84□□□□□ -1.63
HDAC3-206ENST00000471968 CACYBPQ9HB71 228 aaKnown RBP4.84□□□□□ -1.63
HDAC3-206ENST00000471968 ZNF355PQ9NSJ1 428 aa4.84□□□□□ -1.63
HDAC3-206ENST00000471968 STX18Q9P2W9 335 aaKnown RBP4.84□□□□□ -1.63
HDAC3-206ENST00000471968 ZNF232Q9UNY5 417 aa4.84□□□□□ -1.63
HDAC3-206ENST00000471968 TMED5Q9Y3A6 229 aa4.84□□□□□ -1.63
HDAC3-206ENST00000471968 FAM172BPA6NC97 362 aa4.83□□□□□ -1.64
HDAC3-206ENST00000471968 OR6C68A6NDL8 312 aa4.83□□□□□ -1.64
HDAC3-206ENST00000471968 KRTAP9-7A8MTY7 169 aa4.83□□□□□ -1.64
HDAC3-206ENST00000471968 TMEM114B3SHH9 223 aa4.83□□□□□ -1.64
HDAC3-206ENST00000471968 E7ESA3 106 aa4.83□□□□□ -1.64
HDAC3-206ENST00000471968 F5H5K5 113 aa4.83□□□□□ -1.64
HDAC3-206ENST00000471968 G3V318 75 aa4.83□□□□□ -1.64
HDAC3-206ENST00000471968 SLC1A7O00341 560 aa4.83□□□□□ -1.64
HDAC3-206ENST00000471968 DEFB4AO15263 64 aa4.83□□□□□ -1.64
HDAC3-206ENST00000471968 CPSF4O95639 269 aaKnown RBP4.83□□□□□ -1.64
HDAC3-206ENST00000471968 IGKV1D-33P01593 117 aa4.83□□□□□ -1.64
HDAC3-206ENST00000471968 IGKV1-33P01594 117 aa4.83□□□□□ -1.64
HDAC3-206ENST00000471968 CD34P28906 385 aa4.83□□□□□ -1.64
HDAC3-206ENST00000471968 PPIFP30405 207 aaKnown RBP4.83□□□□□ -1.64
HDAC3-206ENST00000471968 CASQ1P31415 396 aa4.83□□□□□ -1.64
HDAC3-206ENST00000471968 FUSP35637 526 aaKnown RBP eCLIP4.83□□□□□ -1.64
HDAC3-206ENST00000471968 CEACAM3P40198 252 aa4.83□□□□□ -1.64
HDAC3-206ENST00000471968 APOC4P55056 127 aa4.83□□□□□ -1.64
HDAC3-206ENST00000471968 ZNF92Q03936 586 aa4.83□□□□□ -1.64
HDAC3-206ENST00000471968 RPL18Q07020 188 aaKnown RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms