RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	GPR173	Q9NS66	373 aa		10.65	□□□□□ -0.7
FDPS-204	ENST00000461507	CHCHD3	Q9NX63	227 aa	Known RBP	10.65	□□□□□ -0.7
FDPS-204	ENST00000461507	OPN4	Q9UHM6	478 aa		10.65	□□□□□ -0.7
FDPS-204	ENST00000461507	EXOG	Q9Y2C4	368 aa	Known RBP	10.65	□□□□□ -0.7
FDPS-204	ENST00000461507	LOC107986453	A0A1B0GWG9	222 aa		10.64	□□□□□ -0.71
FDPS-204	ENST00000461507		A0A1B0GWJ7	208 aa		10.64	□□□□□ -0.71
FDPS-204	ENST00000461507	IRGM	A1A4Y4	181 aa		10.64	□□□□□ -0.71
FDPS-204	ENST00000461507	ZNF732	B4DXR9	585 aa		10.64	□□□□□ -0.71
FDPS-204	ENST00000461507		F5H0A9	414 aa	Predicted RBP	10.64	□□□□□ -0.71
FDPS-204	ENST00000461507	CST4	P01036	141 aa		10.64	□□□□□ -0.71
FDPS-204	ENST00000461507	GNAO1	P09471	354 aa		10.64	□□□□□ -0.71
FDPS-204	ENST00000461507	OCM2	P0CE71	109 aa		10.64	□□□□□ -0.71
FDPS-204	ENST00000461507	OCM	P0CE72	109 aa	Predicted RBP	10.64	□□□□□ -0.71
FDPS-204	ENST00000461507	UBC	P0CG48	685 aa	Known RBP	10.64	□□□□□ -0.71
FDPS-204	ENST00000461507	ATP6V1B1	P15313	513 aa		10.64	□□□□□ -0.71
FDPS-204	ENST00000461507	GATA4	P43694	442 aa		10.64	□□□□□ -0.71
FDPS-204	ENST00000461507	AQP4	P55087	323 aa		10.64	□□□□□ -0.71
FDPS-204	ENST00000461507	ADARB1	P78563	741 aa	Known RBP	10.64	□□□□□ -0.71
FDPS-204	ENST00000461507	IL18R1	Q13478	541 aa		10.64	□□□□□ -0.71
FDPS-204	ENST00000461507	GALE	Q14376	348 aa		10.64	□□□□□ -0.71
FDPS-204	ENST00000461507	CDON	Q4KMG0	1287 aa		10.64	□□□□□ -0.71
FDPS-204	ENST00000461507	ESCO2	Q56NI9	601 aa		10.64	□□□□□ -0.71
FDPS-204	ENST00000461507	DCAF12L2	Q5VW00	463 aa		10.64	□□□□□ -0.71
FDPS-204	ENST00000461507	NLRC3	Q7RTR2	1065 aa		10.64	□□□□□ -0.71
FDPS-204	ENST00000461507	ZNF676	Q8N7Q3	588 aa		10.64	□□□□□ -0.71
FDPS-204	ENST00000461507	OR1M1	Q8NGA1	313 aa		10.64	□□□□□ -0.71
FDPS-204	ENST00000461507	TRMT10A	Q8TBZ6	339 aa	Known RBP	10.64	□□□□□ -0.71
FDPS-204	ENST00000461507	NPRL2	Q8WTW4	380 aa		10.64	□□□□□ -0.71
FDPS-204	ENST00000461507	RPL3L	Q92901	407 aa	Known RBP	10.64	□□□□□ -0.71
FDPS-204	ENST00000461507	IGHV3OR15-7	A0A075B7D8	119 aa		10.63	□□□□□ -0.71
FDPS-204	ENST00000461507	CEACAM18	A8MTB9	384 aa		10.63	□□□□□ -0.71
FDPS-204	ENST00000461507		H0YAE9	185 aa		10.63	□□□□□ -0.71
FDPS-204	ENST00000461507	HAX1	O00165	279 aa		10.63	□□□□□ -0.71
FDPS-204	ENST00000461507	CDIPT	O14735	213 aa		10.63	□□□□□ -0.71
FDPS-204	ENST00000461507	WBP4	O75554	376 aa	Known RBP	10.63	□□□□□ -0.71
FDPS-204	ENST00000461507	FOXH1	O75593	365 aa		10.63	□□□□□ -0.71
FDPS-204	ENST00000461507	NRAS	P01111	189 aa		10.63	□□□□□ -0.71
FDPS-204	ENST00000461507	ZNF20	P17024	532 aa		10.63	□□□□□ -0.71
FDPS-204	ENST00000461507	GBX2	P52951	348 aa	Predicted RBP	10.63	□□□□□ -0.71
FDPS-204	ENST00000461507	ZNF154	Q13106	437 aa		10.63	□□□□□ -0.71
FDPS-204	ENST00000461507	MED21	Q13503	144 aa		10.63	□□□□□ -0.71
FDPS-204	ENST00000461507	KCNJ8	Q15842	424 aa		10.63	□□□□□ -0.71
FDPS-204	ENST00000461507	ZNF181	Q2M3W8	571 aa		10.63	□□□□□ -0.71
FDPS-204	ENST00000461507	CLVS2	Q5SYC1	327 aa		10.63	□□□□□ -0.71
FDPS-204	ENST00000461507	KCTD20	Q7Z5Y7	419 aa		10.63	□□□□□ -0.71
FDPS-204	ENST00000461507	WDR86	Q86TI4	376 aa		10.63	□□□□□ -0.71
FDPS-204	ENST00000461507	LRRC28	Q86X40	367 aa	Predicted RBP	10.63	□□□□□ -0.71
FDPS-204	ENST00000461507	RDH10	Q8IZV5	341 aa		10.63	□□□□□ -0.71
FDPS-204	ENST00000461507	PRSS35	Q8N3Z0	413 aa		10.63	□□□□□ -0.71
FDPS-204	ENST00000461507	BPIFB6	Q8NFQ5	453 aa		10.63	□□□□□ -0.71
FDPS-204	ENST00000461507	OR8B3	Q8NGG8	313 aa		10.63	□□□□□ -0.71
FDPS-204	ENST00000461507	OR2G2	Q8NGZ5	317 aa		10.63	□□□□□ -0.71
FDPS-204	ENST00000461507		Q8TCH9	128 aa		10.63	□□□□□ -0.71
FDPS-204	ENST00000461507	FAM216A	Q8WUB2	273 aa		10.63	□□□□□ -0.71
FDPS-204	ENST00000461507	HPSE2	Q8WWQ2	592 aa		10.63	□□□□□ -0.71
FDPS-204	ENST00000461507	OR5P3	Q8WZ94	311 aa		10.63	□□□□□ -0.71
FDPS-204	ENST00000461507	ITPKC	Q96DU7	683 aa		10.63	□□□□□ -0.71
FDPS-204	ENST00000461507	TECTB	Q96PL2	329 aa		10.63	□□□□□ -0.71
FDPS-204	ENST00000461507	OR8B2	Q96RD0	313 aa		10.63	□□□□□ -0.71
FDPS-204	ENST00000461507	ISG20L2	Q9H9L3	353 aa	Known RBP	10.63	□□□□□ -0.71
FDPS-204	ENST00000461507	PATZ1	Q9HBE1	687 aa	Known RBP	10.63	□□□□□ -0.71
FDPS-204	ENST00000461507	INPP5E	Q9NRR6	644 aa		10.63	□□□□□ -0.71
FDPS-204	ENST00000461507	ERVK13-1	Q9NX77	482 aa		10.63	□□□□□ -0.71
FDPS-204	ENST00000461507	DNAJB11	Q9UBS4	358 aa		10.63	□□□□□ -0.71
FDPS-204	ENST00000461507	FAM230A	A0A1W2PPH8	454 aa		10.62	□□□□□ -0.71
FDPS-204	ENST00000461507	TMEM210	A6NLX4	147 aa		10.62	□□□□□ -0.71
FDPS-204	ENST00000461507		J3QRE1	110 aa		10.62	□□□□□ -0.71
FDPS-204	ENST00000461507	FSTL3	O95633	263 aa		10.62	□□□□□ -0.71
FDPS-204	ENST00000461507	ADRA2C	P18825	462 aa		10.62	□□□□□ -0.71
FDPS-204	ENST00000461507	CPT2	P23786	658 aa		10.62	□□□□□ -0.71
FDPS-204	ENST00000461507	ZFP36	P26651	326 aa	Known RBP	10.62	□□□□□ -0.71
FDPS-204	ENST00000461507	KIR3DL2	P43630	455 aa		10.62	□□□□□ -0.71
FDPS-204	ENST00000461507	SEC61A1	P61619	476 aa	Known RBP	10.62	□□□□□ -0.71
FDPS-204	ENST00000461507	GNB2	P62879	340 aa		10.62	□□□□□ -0.71
FDPS-204	ENST00000461507	GNG3	P63215	75 aa		10.62	□□□□□ -0.71
FDPS-204	ENST00000461507	IZUMO2	Q6UXV1	221 aa		10.62	□□□□□ -0.71
FDPS-204	ENST00000461507	TMPRSS11A	Q6ZMR5	421 aa		10.62	□□□□□ -0.71
FDPS-204	ENST00000461507	AHSA2	Q719I0	299 aa		10.62	□□□□□ -0.71
FDPS-204	ENST00000461507	STX19	Q8N4C7	294 aa		10.62	□□□□□ -0.71
FDPS-204	ENST00000461507	PLPP7	Q8NBV4	271 aa		10.62	□□□□□ -0.71
FDPS-204	ENST00000461507	OR13C3	Q8NGS6	347 aa		10.62	□□□□□ -0.71
FDPS-204	ENST00000461507	OR14K1	Q8NGZ2	314 aa		10.62	□□□□□ -0.71
FDPS-204	ENST00000461507	NANP	Q8TBE9	248 aa		10.62	□□□□□ -0.71
FDPS-204	ENST00000461507	TSEN15	Q8WW01	171 aa	Known RBP	10.62	□□□□□ -0.71
FDPS-204	ENST00000461507	NRG4	Q8WWG1	115 aa		10.62	□□□□□ -0.71
FDPS-204	ENST00000461507	PELI1	Q96FA3	418 aa		10.62	□□□□□ -0.71
FDPS-204	ENST00000461507	JMJD8	Q96S16	334 aa		10.62	□□□□□ -0.71
FDPS-204	ENST00000461507	TMEM246	Q9BRR3	403 aa		10.62	□□□□□ -0.71
FDPS-204	ENST00000461507	SUCNR1	Q9BXA5	334 aa		10.62	□□□□□ -0.71
FDPS-204	ENST00000461507	COMMD4	Q9H0A8	199 aa		10.62	□□□□□ -0.71
FDPS-204	ENST00000461507	MIOX	Q9UGB7	285 aa		10.62	□□□□□ -0.71
FDPS-204	ENST00000461507	OR5V1	Q9UGF6	321 aa		10.62	□□□□□ -0.71
FDPS-204	ENST00000461507	SLC7A11	Q9UPY5	501 aa		10.62	□□□□□ -0.71
FDPS-204	ENST00000461507	TRAV38-1	A0A0B4J264	116 aa		10.61	□□□□□ -0.71
FDPS-204	ENST00000461507		A0A1B0GTI1	187 aa		10.61	□□□□□ -0.71
FDPS-204	ENST00000461507	TMEM89	A2RUT3	159 aa		10.61	□□□□□ -0.71
FDPS-204	ENST00000461507	ANKRD61	A6NGH8	418 aa		10.61	□□□□□ -0.71
FDPS-204	ENST00000461507	OOEP	A6NGQ2	149 aa		10.61	□□□□□ -0.71
FDPS-204	ENST00000461507	TRIM77	I1YAP6	450 aa		10.61	□□□□□ -0.71
FDPS-204	ENST00000461507	LGALS8	O00214	317 aa		10.61	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms