RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 TMEM45BQ96B21 275 aa9.33□□□□□ -0.92
PKP4-206ENST00000452162 ALKBH3Q96Q83 286 aaPredicted RBP9.33□□□□□ -0.92
PKP4-206ENST00000452162 SLC6A15Q9H2J7 730 aa9.33□□□□□ -0.92
PKP4-206ENST00000452162 CA10Q9NS85 328 aa9.33□□□□□ -0.92
PKP4-206ENST00000452162 ZNF224Q9NZL3 707 aa9.33□□□□□ -0.92
PKP4-206ENST00000452162 PIPOXQ9P0Z9 390 aa9.33□□□□□ -0.92
PKP4-206ENST00000452162 MGAT4CQ9UBM8 478 aa9.33□□□□□ -0.92
PKP4-206ENST00000452162 B4GALT7Q9UBV7 327 aa9.33□□□□□ -0.92
PKP4-206ENST00000452162 SPTBN1Q01082 2364 aaKnown RBP9.33□□□□□ -0.92
PKP4-206ENST00000452162 LRRK2Q5S007 2527 aa9.33□□□□□ -0.92
PKP4-206ENST00000452162 IGKV3D-15A0A087WSY6 115 aa9.32□□□□□ -0.92
PKP4-206ENST00000452162 OR6C6A6NF89 314 aa9.32□□□□□ -0.92
PKP4-206ENST00000452162 ZNF736B4DX44 427 aaPredicted RBP9.32□□□□□ -0.92
PKP4-206ENST00000452162 SGCEO43556 437 aa9.32□□□□□ -0.92
PKP4-206ENST00000452162 CDC14BO60729 498 aa9.32□□□□□ -0.92
PKP4-206ENST00000452162 ALX3O95076 343 aa9.32□□□□□ -0.92
PKP4-206ENST00000452162 IGHG3P01860 377 aa9.32□□□□□ -0.92
PKP4-206ENST00000452162 SNAI3Q3KNW1 292 aa9.32□□□□□ -0.92
PKP4-206ENST00000452162 PDSS1Q5T2R2 415 aa9.32□□□□□ -0.92
PKP4-206ENST00000452162 DRAM2Q6UX65 266 aa9.32□□□□□ -0.92
PKP4-206ENST00000452162 TRAPPC6BQ86SZ2 158 aa9.32□□□□□ -0.92
PKP4-206ENST00000452162 RTN4RL2Q86UN3 420 aa9.32□□□□□ -0.92
PKP4-206ENST00000452162 ZNF101Q8IZC7 436 aa9.32□□□□□ -0.92
PKP4-206ENST00000452162 MEIOBQ8N635 442 aa9.32□□□□□ -0.92
PKP4-206ENST00000452162 TMEM104Q8NE00 496 aa9.32□□□□□ -0.92
PKP4-206ENST00000452162 PRR7Q8TB68 274 aa9.32□□□□□ -0.92
PKP4-206ENST00000452162 NICN1Q9BSH3 213 aa9.32□□□□□ -0.92
PKP4-206ENST00000452162 GPR35Q9HC97 309 aa9.32□□□□□ -0.92
PKP4-206ENST00000452162 OSGIN2Q9Y236 505 aa9.32□□□□□ -0.92
PKP4-206ENST00000452162 AMY2AP04746 511 aa9.32□□□□□ -0.92
PKP4-206ENST00000452162 RLN1P04808 185 aa9.32□□□□□ -0.92
PKP4-206ENST00000452162 CHRM2P08172 466 aa9.32□□□□□ -0.92
PKP4-206ENST00000452162 UBBP0CG47 229 aa9.32□□□□□ -0.92
PKP4-206ENST00000452162 B4GALT1P15291 398 aa9.32□□□□□ -0.92
PKP4-206ENST00000452162 GNB3P16520 340 aa9.32□□□□□ -0.92
PKP4-206ENST00000452162 FAHP16930 419 aa9.32□□□□□ -0.92
PKP4-206ENST00000452162 DNASE1P24855 282 aa9.32□□□□□ -0.92
PKP4-206ENST00000452162 CLDN18P56856 261 aa9.32□□□□□ -0.92
PKP4-206ENST00000452162 HGFACQ04756 655 aa9.32□□□□□ -0.92
PKP4-206ENST00000452162 SCRN3Q0VDG4 424 aa9.32□□□□□ -0.92
PKP4-206ENST00000452162 ZNF774Q6NX45 483 aa9.32□□□□□ -0.92
PKP4-206ENST00000452162 ZNF584Q8IVC4 421 aa9.32□□□□□ -0.92
PKP4-206ENST00000452162 CHST4Q8NCG5 386 aa9.32□□□□□ -0.92
PKP4-206ENST00000452162 OR2T35Q8NGX2 323 aa9.32□□□□□ -0.92
PKP4-206ENST00000452162 OR1F12Q8NHA8 337 aa9.32□□□□□ -0.92
PKP4-206ENST00000452162 LILRB4Q8NHJ6 448 aa9.32□□□□□ -0.92
PKP4-206ENST00000452162 GRPEL2Q8TAA5 225 aa9.32□□□□□ -0.92
PKP4-206ENST00000452162 KCNG3Q8TAE7 436 aa9.32□□□□□ -0.92
PKP4-206ENST00000452162 NUDCD2Q8WVJ2 157 aa9.32□□□□□ -0.92
PKP4-206ENST00000452162 PP6455Q8WZ26 134 aa9.32□□□□□ -0.92
PKP4-206ENST00000452162 C10orf35Q96D05 121 aa9.32□□□□□ -0.92
PKP4-206ENST00000452162 FOXB1Q99853 325 aa9.32□□□□□ -0.92
PKP4-206ENST00000452162 CHST5Q9GZS9 411 aa9.32□□□□□ -0.92
PKP4-206ENST00000452162 ALX4Q9H161 411 aaPredicted RBP9.32□□□□□ -0.92
PKP4-206ENST00000452162 OR10A2Q9H208 303 aa9.32□□□□□ -0.92
PKP4-206ENST00000452162 LDAHQ9H6V9 325 aa9.32□□□□□ -0.92
PKP4-206ENST00000452162 ACKR4Q9NPB9 350 aa9.32□□□□□ -0.92
PKP4-206ENST00000452162 TRGV5A0A0B4J1U4 118 aa9.31□□□□□ -0.92
PKP4-206ENST00000452162 SSX5O60225 188 aa9.31□□□□□ -0.92
PKP4-206ENST00000452162 OR2A4O95047 310 aa9.31□□□□□ -0.92
PKP4-206ENST00000452162 MPIG6BO95866 241 aa9.31□□□□□ -0.92
PKP4-206ENST00000452162 GIPP09681 153 aaPredicted RBP9.31□□□□□ -0.92
PKP4-206ENST00000452162 ZNF32P17041 273 aa9.31□□□□□ -0.92
PKP4-206ENST00000452162 MPZP25189 248 aa9.31□□□□□ -0.92
PKP4-206ENST00000452162 ALDH3B1P43353 468 aa9.31□□□□□ -0.92
PKP4-206ENST00000452162 UBE2V2Q15819 145 aa9.31□□□□□ -0.92
PKP4-206ENST00000452162 CEACAM16Q2WEN9 425 aa9.31□□□□□ -0.92
PKP4-206ENST00000452162 SFRP5Q5T4F7 317 aa9.31□□□□□ -0.92
PKP4-206ENST00000452162 IDO2Q6ZQW0 420 aa9.31□□□□□ -0.92
PKP4-206ENST00000452162 OR52H1Q8NGJ2 320 aa9.31□□□□□ -0.92
PKP4-206ENST00000452162 SGK3Q96BR1 496 aa9.31□□□□□ -0.92
PKP4-206ENST00000452162 OR2A7Q96R45 310 aa9.31□□□□□ -0.92
PKP4-206ENST00000452162 SLC6A7Q99884 636 aa9.31□□□□□ -0.92
PKP4-206ENST00000452162 SLC25A21Q9BQT8 299 aaPredicted RBP9.31□□□□□ -0.92
PKP4-206ENST00000452162 SELENOIQ9C0D9 397 aa9.31□□□□□ -0.92
PKP4-206ENST00000452162 CHST6Q9GZX3 395 aa9.31□□□□□ -0.92
PKP4-206ENST00000452162 MYOZ1Q9NP98 299 aaPredicted RBP9.31□□□□□ -0.92
PKP4-206ENST00000452162 SPRR3Q9UBC9 169 aa9.31□□□□□ -0.92
PKP4-206ENST00000452162 DOPEY2Q9Y3R5 2298 aa9.31□□□□□ -0.92
PKP4-206ENST00000452162 OR14I1A6ND48 311 aa9.31□□□□□ -0.92
PKP4-206ENST00000452162 ZNF708P17019 499 aa9.31□□□□□ -0.92
PKP4-206ENST00000452162 MEF2DQ14814 521 aa9.31□□□□□ -0.92
PKP4-206ENST00000452162 KISS1Q15726 138 aa9.31□□□□□ -0.92
PKP4-206ENST00000452162 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.31□□□□□ -0.92
PKP4-206ENST00000452162 MUC20Q8N307 709 aaPredicted RBP9.31□□□□□ -0.92
PKP4-206ENST00000452162 BPIFB2Q8N4F0 458 aa9.31□□□□□ -0.92
PKP4-206ENST00000452162 OR4S1Q8NGB4 309 aa9.31□□□□□ -0.92
PKP4-206ENST00000452162 GPER1Q99527 375 aa9.31□□□□□ -0.92
PKP4-206ENST00000452162 TMEM59Q9BXS4 323 aa9.31□□□□□ -0.92
PKP4-206ENST00000452162 EXO5Q9H790 373 aa9.31□□□□□ -0.92
PKP4-206ENST00000452162 SLC2A8Q9NY64 477 aa9.31□□□□□ -0.92
PKP4-206ENST00000452162 UPB1Q9UBR1 384 aa9.31□□□□□ -0.92
PKP4-206ENST00000452162 SH3BGRL2Q9UJC5 107 aa9.31□□□□□ -0.92
PKP4-206ENST00000452162 ANAPC10Q9UM13 185 aa9.31□□□□□ -0.92
PKP4-206ENST00000452162 PIGLQ9Y2B2 252 aa9.31□□□□□ -0.92
PKP4-206ENST00000452162 ZNF835Q9Y2P0 537 aa9.31□□□□□ -0.92
PKP4-206ENST00000452162 A0A1W2PP11 408 aa9.3□□□□□ -0.92
PKP4-206ENST00000452162 UBE2QL1A1L167 161 aa9.3□□□□□ -0.92
PKP4-206ENST00000452162 DHRS7CA6NNS2 312 aa9.3□□□□□ -0.92
PKP4-206ENST00000452162 MTRF1O75570 445 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms