RNA–Protein interactions for RNA: ENST00000447507.1

SNHG3-203, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 185 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-203ENST00000447507 PDK3Q15120 406 aa-0.04□□□□□ -2.42
SNHG3-203ENST00000447507 PSMD5Q16401 504 aa-0.04□□□□□ -2.42
SNHG3-203ENST00000447507 XKR7Q5GH72 579 aa-0.04□□□□□ -2.42
SNHG3-203ENST00000447507 TPTE2P1Q5T6R2 138 aa-0.04□□□□□ -2.42
SNHG3-203ENST00000447507 MFSD14CQ5VZR4 134 aa-0.04□□□□□ -2.42
SNHG3-203ENST00000447507 SLC8B1Q6J4K2 584 aa-0.04□□□□□ -2.42
SNHG3-203ENST00000447507 CMC1Q7Z7K0 106 aa-0.04□□□□□ -2.42
SNHG3-203ENST00000447507 AMN1Q8IY45 258 aa-0.04□□□□□ -2.42
SNHG3-203ENST00000447507 IQCKQ8N0W5 287 aa-0.04□□□□□ -2.42
SNHG3-203ENST00000447507 LINC00337Q8N6G1 96 aa-0.04□□□□□ -2.42
SNHG3-203ENST00000447507 BHLHE23Q8NDY6 225 aa-0.04□□□□□ -2.42
SNHG3-203ENST00000447507 BPIFCQ8NFQ6 507 aa-0.04□□□□□ -2.42
SNHG3-203ENST00000447507 OR52M1Q8NGK5 317 aa-0.04□□□□□ -2.42
SNHG3-203ENST00000447507 OR4K13Q8NH42 304 aa-0.04□□□□□ -2.42
SNHG3-203ENST00000447507 LYPD6BQ8NI32 183 aa-0.04□□□□□ -2.42
SNHG3-203ENST00000447507 GPR151Q8TDV0 419 aa-0.04□□□□□ -2.42
SNHG3-203ENST00000447507 C10orf105Q8TEF2 133 aa-0.04□□□□□ -2.42
SNHG3-203ENST00000447507 MAL2Q969L2 176 aa-0.04□□□□□ -2.42
SNHG3-203ENST00000447507 RPEQ96AT9 228 aa-0.04□□□□□ -2.42
SNHG3-203ENST00000447507 BTN2A3PQ96KV6 586 aa-0.04□□□□□ -2.42
SNHG3-203ENST00000447507 PPP1R36Q96LQ0 422 aa-0.04□□□□□ -2.42
SNHG3-203ENST00000447507 FAM19A4Q96LR4 140 aa-0.04□□□□□ -2.42
SNHG3-203ENST00000447507 ALS2CR12Q96Q35 445 aa-0.04□□□□□ -2.42
SNHG3-203ENST00000447507 MTG1Q9BT17 334 aaPredicted RBP-0.04□□□□□ -2.42
SNHG3-203ENST00000447507 TSSK6Q9BXA6 273 aa-0.04□□□□□ -2.42
SNHG3-203ENST00000447507 TOLLIPQ9H0E2 274 aa-0.04□□□□□ -2.42
SNHG3-203ENST00000447507 GABARAPL1Q9H0R8 117 aa-0.04□□□□□ -2.42
SNHG3-203ENST00000447507 CXCL16Q9H2A7 254 aa-0.04□□□□□ -2.42
SNHG3-203ENST00000447507 LRRC19Q9H756 370 aa-0.04□□□□□ -2.42
SNHG3-203ENST00000447507 CCDC59Q9P031 241 aaKnown RBP-0.04□□□□□ -2.42
SNHG3-203ENST00000447507 PSMC3IPQ9P2W1 217 aaPredicted RBP-0.04□□□□□ -2.42
SNHG3-203ENST00000447507 SLC17A4Q9Y2C5 497 aa-0.04□□□□□ -2.42
SNHG3-203ENST00000447507 ZNF257Q9Y2Q1 563 aa-0.04□□□□□ -2.42
SNHG3-203ENST00000447507 ZNF706Q9Y5V0 76 aaPredicted RBP-0.04□□□□□ -2.42
SNHG3-203ENST00000447507 AP1M2Q9Y6Q5 423 aa-0.04□□□□□ -2.42
SNHG3-203ENST00000447507 CACNA1SQ13698 1873 aa-0.04□□□□□ -2.42
SNHG3-203ENST00000447507 SLIT2O94813 1529 aa-0.04□□□□□ -2.42
SNHG3-203ENST00000447507 MPDZO75970 2070 aa-0.04□□□□□ -2.42
SNHG3-203ENST00000447507 NUP205Q92621 2012 aa-0.04□□□□□ -2.42
SNHG3-203ENST00000447507 CCDC88CQ9P219 2028 aa-0.04□□□□□ -2.42
SNHG3-203ENST00000447507 TRPM3Q9HCF6 1732 aaPredicted RBP-0.04□□□□□ -2.42
SNHG3-203ENST00000447507 NCKAP5O14513 1909 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 LCTP09848 1927 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 DLG5Q8TDM6 1919 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 USP47Q96K76 1375 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 A0A0G2JMP0 313 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 A0A0X1KG70 313 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 OR2AG2A6NM03 316 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 SIGLEC16A6NMB1 481 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 KNCNA6PVL3 124 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 ODF3BA8MYP8 253 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 ANKRD65E5RJM6 399 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 FNDC10F2Z333 226 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 H0YCG3 227 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 LY6LH3BQJ8 138 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 TEX46H3BTG2 121 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 M0R3G1 203 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 AP3B1O00203 1094 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 GMFGO60234 142 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 SPAG6O75602 509 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 CRTAPO75718 401 aaPredicted RBP-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 ETHE1O95571 254 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 LSM8O95777 96 aaKnown RBP-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 GUCA1CO95843 209 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 PTTG1O95997 202 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 CXorf1O96002 111 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 NAPSAO96009 420 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 HPRT1P00492 218 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 SERPINA3P01011 423 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 TROVE2P10155 538 aaKnown RBP eCLIP-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 GZMAP12544 262 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 MX1P20591 662 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 BCKDHBP21953 392 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 GLRA2P23416 452 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 CXCR1P25024 350 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 CRABP2P29373 138 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 SLC6A1P30531 599 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 FOXN2P32314 431 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 SLC1A1P43005 524 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 IFNAR2P48551 515 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 EMP2P54851 167 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 ZNF33AQ06730 810 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 INCA1Q0VD86 236 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 ENDOGQ14249 297 aaKnown RBP-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 TAF7Q15545 349 aaPredicted RBP-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 OR1Q1Q15612 314 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 CST6Q15828 149 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 TMEM241Q24JQ0 296 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 ALKBH6Q3KRA9 238 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 ATAD3BQ5T9A4 648 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 RNASEKQ6P5S7 137 aaKnown RBP-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 ZYG11AQ6WRX3 759 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 CERS6Q6ZMG9 384 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 TMPRSS11AQ6ZMR5 421 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 HORMAD1Q86X24 394 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 TICAM2Q86XR7 235 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 RAB43Q86YS6 212 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 ZDHHC22Q8N966 263 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 UBAC2Q8NBM4 344 aa-0.05□□□□□ -2.42
SNHG3-203ENST00000447507 SPATA4Q8NEY3 305 aa-0.05□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms