RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 TNFSF11O14788 317 aa14.8□□□□□ -0.04
TCOF1-206ENST00000445265 MT-CO2P00403 227 aa14.8□□□□□ -0.04
TCOF1-206ENST00000445265 B4GALT1P15291 398 aa14.8□□□□□ -0.04
TCOF1-206ENST00000445265 TAS2R30P59541 319 aa14.8□□□□□ -0.04
TCOF1-206ENST00000445265 INSM1Q01101 510 aaPredicted RBP14.8□□□□□ -0.04
TCOF1-206ENST00000445265 SEZ6L2Q6UXD5 910 aa14.8□□□□□ -0.04
TCOF1-206ENST00000445265 SLC25A26Q70HW3 274 aa14.8□□□□□ -0.04
TCOF1-206ENST00000445265 ZFP82Q8N141 532 aa14.8□□□□□ -0.04
TCOF1-206ENST00000445265 OR1F12Q8NHA8 337 aa14.8□□□□□ -0.04
TCOF1-206ENST00000445265 MITD1Q8WV92 249 aa14.8□□□□□ -0.04
TCOF1-206ENST00000445265 C20orf24Q9BUV8 137 aa14.8□□□□□ -0.04
TCOF1-206ENST00000445265 AK3Q9UIJ7 227 aa14.8□□□□□ -0.04
TCOF1-206ENST00000445265 A0A1W2PPC1 479 aa14.8□□□□□ -0.04
TCOF1-206ENST00000445265 F10P00742 488 aa14.8□□□□□ -0.04
TCOF1-206ENST00000445265 GLRA1P23415 457 aa14.8□□□□□ -0.04
TCOF1-206ENST00000445265 ROM1Q03395 351 aa14.8□□□□□ -0.04
TCOF1-206ENST00000445265 SURF2Q15527 256 aaPredicted RBP14.8□□□□□ -0.04
TCOF1-206ENST00000445265 JMJD6Q6NYC1 403 aaPredicted RBP14.8□□□□□ -0.04
TCOF1-206ENST00000445265 OR8B12Q8NGG6 310 aa14.8□□□□□ -0.04
TCOF1-206ENST00000445265 MARVELD3Q96A59 401 aa14.8□□□□□ -0.04
TCOF1-206ENST00000445265 ZNF768Q9H5H4 540 aaKnown RBP14.8□□□□□ -0.04
TCOF1-206ENST00000445265 TRBV5-7A0A0A0MS05 114 aa14.79□□□□□ -0.04
TCOF1-206ENST00000445265 A0A1W2PPV4 95 aa14.79□□□□□ -0.04
TCOF1-206ENST00000445265 TOX3O15405 576 aaPredicted RBP14.79□□□□□ -0.04
TCOF1-206ENST00000445265 WDSUB1Q8N9V3 476 aa14.79□□□□□ -0.04
TCOF1-206ENST00000445265 C2CD4CQ8TF44 421 aa14.79□□□□□ -0.04
TCOF1-206ENST00000445265 NMES1Q9C002 83 aa14.79□□□□□ -0.04
TCOF1-206ENST00000445265 ADAM19Q9H013 955 aa14.79□□□□□ -0.04
TCOF1-206ENST00000445265 NXPH2O95156 264 aa14.79□□□□□ -0.04
TCOF1-206ENST00000445265 FOXK1P85037 733 aa14.79□□□□□ -0.04
TCOF1-206ENST00000445265 ZNF345Q14585 488 aa14.79□□□□□ -0.04
TCOF1-206ENST00000445265 LINC01590Q5TEZ4 76 aa14.79□□□□□ -0.04
TCOF1-206ENST00000445265 CLDN1O95832 211 aa14.79□□□□□ -0.04
TCOF1-206ENST00000445265 RAB1AP62820 205 aa14.79□□□□□ -0.04
TCOF1-206ENST00000445265 SLC38A6Q8IZM9 456 aa14.79□□□□□ -0.04
TCOF1-206ENST00000445265 SOSTQ9BQB4 213 aa14.79□□□□□ -0.04
TCOF1-206ENST00000445265 CEP290O15078 2479 aa14.79□□□□□ -0.04
TCOF1-206ENST00000445265 A0A0G2JK05 382 aa14.78□□□□□ -0.04
TCOF1-206ENST00000445265 TFF2Q03403 129 aa14.78□□□□□ -0.04
TCOF1-206ENST00000445265 TMEM65Q6PI78 240 aa14.78□□□□□ -0.04
TCOF1-206ENST00000445265 BHLHE23Q8NDY6 225 aa14.78□□□□□ -0.04
TCOF1-206ENST00000445265 OR4D10Q8NGI6 311 aa14.78□□□□□ -0.04
TCOF1-206ENST00000445265 OR51H1Q8NH63 302 aa14.78□□□□□ -0.04
TCOF1-206ENST00000445265 ZNF426Q9BUY5 554 aa14.78□□□□□ -0.04
TCOF1-206ENST00000445265 RIMS4Q9H426 269 aaPredicted RBP14.78□□□□□ -0.04
TCOF1-206ENST00000445265 TP53TG5Q9Y2B4 290 aa14.78□□□□□ -0.04
TCOF1-206ENST00000445265 DEGS1O15121 323 aa14.78□□□□□ -0.04
TCOF1-206ENST00000445265 SPRY1O43609 319 aaPredicted RBP14.78□□□□□ -0.04
TCOF1-206ENST00000445265 VSIG8P0DPA2 414 aa14.78□□□□□ -0.04
TCOF1-206ENST00000445265 FUT3P21217 361 aa14.78□□□□□ -0.04
TCOF1-206ENST00000445265 SLC22A18ASQ8N1D0 253 aa14.78□□□□□ -0.04
TCOF1-206ENST00000445265 FBXL14Q8N1E6 418 aa14.78□□□□□ -0.04
TCOF1-206ENST00000445265 ZNF230Q9UIE0 474 aaPredicted RBP14.78□□□□□ -0.04
TCOF1-206ENST00000445265 NMBP08949 121 aa14.78□□□□□ -0.04
TCOF1-206ENST00000445265 DHODHQ02127 395 aa14.78□□□□□ -0.04
TCOF1-206ENST00000445265 BATF2Q8N1L9 274 aa14.78□□□□□ -0.04
TCOF1-206ENST00000445265 SAT2Q96F10 170 aaPredicted RBP14.78□□□□□ -0.04
TCOF1-206ENST00000445265 MTCH2Q9Y6C9 303 aa14.78□□□□□ -0.04
TCOF1-206ENST00000445265 VWA8A3KMH1 1905 aa14.78□□□□□ -0.04
TCOF1-206ENST00000445265 PLSCR5A0PG75 271 aa14.78□□□□□ -0.04
TCOF1-206ENST00000445265 CEACAM16Q2WEN9 425 aa14.78□□□□□ -0.04
TCOF1-206ENST00000445265 HIST2H3PS2Q5TEC6 136 aa14.78□□□□□ -0.04
TCOF1-206ENST00000445265 AKR7LQ8NHP1 331 aa14.78□□□□□ -0.04
TCOF1-206ENST00000445265 PIK3IP1Q96FE7 263 aa14.78□□□□□ -0.04
TCOF1-206ENST00000445265 FOXB1Q99853 325 aa14.78□□□□□ -0.04
TCOF1-206ENST00000445265 FN3KRPQ9HA64 309 aa14.78□□□□□ -0.04
TCOF1-206ENST00000445265 A6NCN8 305 aa14.77□□□□□ -0.04
TCOF1-206ENST00000445265 ZNF724A8MTY0 619 aa14.77□□□□□ -0.04
TCOF1-206ENST00000445265 LSM6P62312 80 aaKnown RBP14.77□□□□□ -0.04
TCOF1-206ENST00000445265 GAB4Q2WGN9 574 aa14.77□□□□□ -0.04
TCOF1-206ENST00000445265 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.77□□□□□ -0.04
TCOF1-206ENST00000445265 C6orf15Q6UXA7 325 aaPredicted RBP14.77□□□□□ -0.04
TCOF1-206ENST00000445265 ALKBH3Q96Q83 286 aaPredicted RBP14.77□□□□□ -0.04
TCOF1-206ENST00000445265 C1QTNF6Q9BXI9 259 aa14.77□□□□□ -0.04
TCOF1-206ENST00000445265 KLRC4-KLRK1H3BQV0 150 aa14.77□□□□□ -0.04
TCOF1-206ENST00000445265 S100A8P05109 93 aa14.77□□□□□ -0.04
TCOF1-206ENST00000445265 SLC25A4P12235 298 aa14.77□□□□□ -0.04
TCOF1-206ENST00000445265 EIF2S3P41091 472 aaKnown RBP14.77□□□□□ -0.04
TCOF1-206ENST00000445265 LINC00696Q6ZRV3 163 aa14.77□□□□□ -0.04
TCOF1-206ENST00000445265 OR2V1Q8NHB1 315 aa14.77□□□□□ -0.04
TCOF1-206ENST00000445265 LHFPL5Q8TAF8 219 aa14.77□□□□□ -0.04
TCOF1-206ENST00000445265 B3GAT1Q9P2W7 334 aa14.77□□□□□ -0.04
TCOF1-206ENST00000445265 ADAP1O75689 374 aa14.77□□□□□ -0.05
TCOF1-206ENST00000445265 OR2C1O95371 312 aa14.77□□□□□ -0.05
TCOF1-206ENST00000445265 EFNB1P98172 346 aa14.77□□□□□ -0.05
TCOF1-206ENST00000445265 UNC13CQ8NB66 2214 aa14.77□□□□□ -0.05
TCOF1-206ENST00000445265 SPAG17Q6Q759 2223 aa14.77□□□□□ -0.05
TCOF1-206ENST00000445265 MBTPS2O43462 519 aa14.77□□□□□ -0.05
TCOF1-206ENST00000445265 TUSC2O75896 110 aa14.77□□□□□ -0.05
TCOF1-206ENST00000445265 STK11Q15831 433 aa14.77□□□□□ -0.05
TCOF1-206ENST00000445265 CNEP1R1Q8N9A8 125 aa14.77□□□□□ -0.05
TCOF1-206ENST00000445265 THOC3Q96J01 351 aaKnown RBP14.77□□□□□ -0.05
TCOF1-206ENST00000445265 MRPS18BQ9Y676 258 aaKnown RBP14.77□□□□□ -0.05
TCOF1-206ENST00000445265 IGKV1D-42A0A075B6H8 117 aa14.76□□□□□ -0.05
TCOF1-206ENST00000445265 SFTA3P0C7M3 94 aa14.76□□□□□ -0.05
TCOF1-206ENST00000445265 ARR3P36575 388 aa14.76□□□□□ -0.05
TCOF1-206ENST00000445265 IGLV3-21P80748 117 aaPredicted RBP14.76□□□□□ -0.05
TCOF1-206ENST00000445265 ZP4Q12836 540 aa14.76□□□□□ -0.05
TCOF1-206ENST00000445265 KIAA0141Q14154 515 aaPredicted RBP14.76□□□□□ -0.05
TCOF1-206ENST00000445265 CLEC18BQ6UXF7 455 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms