RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 ZNF816-ZNF321PA0A0X1KG74 233 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 TMEM272A0A1B0GTI8 110 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 A0A1W2PQ09 198 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 CENPXA8MT69 81 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 GABARAPH6UMI1 98 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 LDLRAD4O15165 306 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 LMX1BO60663 402 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 ZNF780AO75290 641 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 TNFSF13O75888 250 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 ECDO95905 644 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 NRASP01111 189 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 CHRM2P08172 466 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 HCKP08631 526 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 CSF3P09919 207 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 GSTT2BP0CG30 244 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 PRF1P14222 555 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 SELEP16581 610 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 FAHP16930 419 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 CCNOP22674 350 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 IGHV1-2P23083 117 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 IL32P24001 234 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 CDK2P24941 298 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 AZGP1P25311 298 aaKnown RBP3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 ZNF93P35789 620 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 PLA2G5P39877 138 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 PTGFRP43088 359 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 POU3F4P49335 361 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 TDGF1P3P51864 188 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 FUT6P51993 359 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 ATP1B3P54709 279 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 FOXG1P55316 489 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 CLDN12P56749 244 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 AP3S2P59780 193 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 FAM3AP98173 230 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 IFITM3Q01628 133 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 SSBP1Q04837 148 aaKnown RBP3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 FOXF2Q12947 444 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 GPR176Q14439 515 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 ARL6IP1Q15041 203 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 OXA1LQ15070 435 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 OR8B8Q15620 311 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 KISS1Q15726 138 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 ZNF79Q15937 498 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 SNAI3Q3KNW1 292 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 C3orf36Q3SXR2 165 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 LINC00303Q3SY05 128 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 TMEM42Q69YG0 159 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 ASPHD2Q6ICH7 369 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 VWA1Q6PCB0 445 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 DCDC5Q6ZRR9 648 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 LHFPL2Q6ZUX7 228 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 BHLHA15Q7RTS1 189 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 KRT74Q7RTS7 529 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 MRPL21Q7Z2W9 205 aaKnown RBP3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 MDP1Q86V88 176 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 LYPD6Q86Y78 171 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 THNSL2Q86YJ6 484 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 DOLPP1Q86YN1 238 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 OR5AS1Q8N127 324 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 CENPSQ8N2Z9 138 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 ZNF610Q8N9Z0 462 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 POC5Q8NA72 575 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 DNAAF1Q8NEP3 725 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 STEAP2Q8NFT2 490 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 OR4M2Q8NGB6 313 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 OR51D1Q8NGF3 324 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 OR52N4Q8NGI2 321 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 KCNG3Q8TAE7 436 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 SMIM4Q8WVI0 70 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 DEDD2Q8WXF8 326 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 SLC25A28Q96A46 364 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 RFT1Q96AA3 541 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 HAVCR1Q96D42 359 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 SNRNP40Q96DI7 357 aaKnown RBP3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 MUCL1Q96DR8 90 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 SLC25A38Q96DW6 304 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 POM121L2Q96KW2 1035 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 LYZL4Q96KX0 146 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 HIST1H2AAQ96QV6 131 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 GPER1Q99527 375 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 SDHCQ99643 169 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 C7orf50Q9BRJ6 194 aaKnown RBP3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 NUDT16L1Q9BRJ7 211 aaKnown RBP3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 THAP7Q9BT49 309 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 SLC22A4Q9H015 551 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 CST11Q9H112 138 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 PRORYQ9H606 182 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 CNTD2Q9H8S5 307 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 SCPEP1Q9HB40 452 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 CDH20Q9HBT6 801 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 GCM1Q9NP62 436 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 ELOVL5Q9NYP7 299 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 LUZP4Q9P127 313 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 ZNF629Q9UEG4 869 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 KCNN3Q9UGI6 736 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 ZNF835Q9Y2P0 537 aa3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 MRPS28Q9Y2Q9 187 aaKnown RBP3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 MRPS7Q9Y2R9 242 aaKnown RBP3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 NOP16Q9Y3C1 178 aaKnown RBP3.43□□□□□ -1.86
HMGB1P37-201ENST00000439613 SPEF1Q9Y4P9 236 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms