RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 LSM6P62312 80 aaKnown RBP15.12■□□□□ 0.01
PTPRA-205ENST00000399903 ARMC6Q6NXE6 501 aa15.12■□□□□ 0.01
PTPRA-205ENST00000399903 GLIPR1L1Q6UWM5 242 aa15.12■□□□□ 0.01
PTPRA-205ENST00000399903 MED25Q71SY5 747 aa15.12■□□□□ 0.01
PTPRA-205ENST00000399903 TOMM40LQ969M1 308 aa15.12■□□□□ 0.01
PTPRA-205ENST00000399903 ANKRD9Q96BM1 317 aaPredicted RBP15.12■□□□□ 0.01
PTPRA-205ENST00000399903 TCTN2Q96GX1 697 aa15.12■□□□□ 0.01
PTPRA-205ENST00000399903 GAL3ST4Q96RP7 486 aa15.12■□□□□ 0.01
PTPRA-205ENST00000399903 A0A087WZY1 265 aa15.12■□□□□ 0.01
PTPRA-205ENST00000399903 TAAR5O14804 337 aa15.12■□□□□ 0.01
PTPRA-205ENST00000399903 H2BFMP0C1H6 154 aa15.12■□□□□ 0.01
PTPRA-205ENST00000399903 OMGP23515 440 aa15.12■□□□□ 0.01
PTPRA-205ENST00000399903 CRABP1P29762 137 aa15.12■□□□□ 0.01
PTPRA-205ENST00000399903 FOXL2P58012 376 aa15.12■□□□□ 0.01
PTPRA-205ENST00000399903 DEFB133Q30KQ1 61 aa15.12■□□□□ 0.01
PTPRA-205ENST00000399903 ZNF574Q6ZN55 896 aaPredicted RBP15.12■□□□□ 0.01
PTPRA-205ENST00000399903 POC1AQ8NBT0 407 aa15.12■□□□□ 0.01
PTPRA-205ENST00000399903 LMX1AQ8TE12 382 aa15.12■□□□□ 0.01
PTPRA-205ENST00000399903 PRRX2Q99811 253 aa15.12■□□□□ 0.01
PTPRA-205ENST00000399903 LRRC61Q9BV99 259 aa15.12■□□□□ 0.01
PTPRA-205ENST00000399903 SPTY2D1-AS1A0A0U1RR47 76 aa15.11■□□□□ 0.01
PTPRA-205ENST00000399903 HIST1H2BKO60814 126 aa15.11■□□□□ 0.01
PTPRA-205ENST00000399903 HIST1H2BJP06899 126 aa15.11■□□□□ 0.01
PTPRA-205ENST00000399903 HCKP08631 526 aa15.11■□□□□ 0.01
PTPRA-205ENST00000399903 HIST1H2BOP23527 126 aa15.11■□□□□ 0.01
PTPRA-205ENST00000399903 HIST1H2BBP33778 126 aa15.11■□□□□ 0.01
PTPRA-205ENST00000399903 GFERP55789 205 aa15.11■□□□□ 0.01
PTPRA-205ENST00000399903 HIST1H2BDP58876 126 aa15.11■□□□□ 0.01
PTPRA-205ENST00000399903 HIST1H2BCP62807 126 aa15.11■□□□□ 0.01
PTPRA-205ENST00000399903 SPEM2Q0P670 501 aa15.11■□□□□ 0.01
PTPRA-205ENST00000399903 OR8G1Q15617 311 aa15.11■□□□□ 0.01
PTPRA-205ENST00000399903 HIST2H2BEQ16778 126 aa15.11■□□□□ 0.01
PTPRA-205ENST00000399903 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.11■□□□□ 0.01
PTPRA-205ENST00000399903 CATSPERDQ86XM0 798 aa15.11■□□□□ 0.01
PTPRA-205ENST00000399903 PRSS58Q8IYP2 241 aa15.11■□□□□ 0.01
PTPRA-205ENST00000399903 C16orf52Q8NHV5 167 aa15.11■□□□□ 0.01
PTPRA-205ENST00000399903 Q8WTZ3 238 aa15.11■□□□□ 0.01
PTPRA-205ENST00000399903 HIST1H2BHQ93079 126 aa15.11■□□□□ 0.01
PTPRA-205ENST00000399903 ARHGAP5-AS1Q96IT6 56 aa15.11■□□□□ 0.01
PTPRA-205ENST00000399903 HIST1H2BNQ99877 126 aa15.11■□□□□ 0.01
PTPRA-205ENST00000399903 HIST1H2BMQ99879 126 aa15.11■□□□□ 0.01
PTPRA-205ENST00000399903 C14orf166Q9Y224 244 aaKnown RBP15.11■□□□□ 0.01
PTPRA-205ENST00000399903 ZNF93P35789 620 aaPredicted RBP15.11■□□□□ 0.01
PTPRA-205ENST00000399903 TMEM268Q5VZI3 342 aa15.11■□□□□ 0.01
PTPRA-205ENST00000399903 NTNG2Q96CW9 530 aa15.11■□□□□ 0.01
PTPRA-205ENST00000399903 ADAT3Q96EY9 351 aaPredicted RBP15.11■□□□□ 0.01
PTPRA-205ENST00000399903 KLHDC7BQ96G42 594 aa15.11■□□□□ 0.01
PTPRA-205ENST00000399903 SNX22Q96L94 193 aa15.11■□□□□ 0.01
PTPRA-205ENST00000399903 ADOQ96SZ5 270 aa15.11■□□□□ 0.01
PTPRA-205ENST00000399903 LMAN1LQ9HAT1 526 aa15.11■□□□□ 0.01
PTPRA-205ENST00000399903 A0A0J9YY10 115 aa15.1■□□□□ 0.01
PTPRA-205ENST00000399903 SCDO00767 359 aa15.1■□□□□ 0.01
PTPRA-205ENST00000399903 SCAF4O95104 1147 aaKnown RBP15.1■□□□□ 0.01
PTPRA-205ENST00000399903 IFNA21P01568 189 aa15.1■□□□□ 0.01
PTPRA-205ENST00000399903 SMIM10L1P0DMW3 83 aa15.1■□□□□ 0.01
PTPRA-205ENST00000399903 BCKDHBP21953 392 aa15.1■□□□□ 0.01
PTPRA-205ENST00000399903 RABIFP47224 123 aa15.1■□□□□ 0.01
PTPRA-205ENST00000399903 SLC35A1P78382 337 aa15.1■□□□□ 0.01
PTPRA-205ENST00000399903 PHF19Q5T6S3 580 aa15.1■□□□□ 0.01
PTPRA-205ENST00000399903 CA13Q8N1Q1 262 aa15.1■□□□□ 0.01
PTPRA-205ENST00000399903 LRRC75AQ8NAA5 344 aa15.1■□□□□ 0.01
PTPRA-205ENST00000399903 ZFP62Q8NB50 900 aaPredicted RBP15.1■□□□□ 0.01
PTPRA-205ENST00000399903 NT5CQ8TCD5 201 aa15.1■□□□□ 0.01
PTPRA-205ENST00000399903 GPBAR1Q8TDU6 330 aa15.1■□□□□ 0.01
PTPRA-205ENST00000399903 MRPL24Q96A35 216 aaKnown RBP15.1■□□□□ 0.01
PTPRA-205ENST00000399903 RAB39BQ96DA2 213 aa15.1■□□□□ 0.01
PTPRA-205ENST00000399903 SMIM10Q96HG1 83 aa15.1■□□□□ 0.01
PTPRA-205ENST00000399903 GNRHR2Q96P88 292 aa15.1■□□□□ 0.01
PTPRA-205ENST00000399903 TUBA4BQ9H853 241 aa15.1■□□□□ 0.01
PTPRA-205ENST00000399903 STARD10Q9Y365 291 aa15.1■□□□□ 0.01
PTPRA-205ENST00000399903 HDGFL3Q9Y3E1 203 aa15.1■□□□□ 0.01
PTPRA-205ENST00000399903 BORCS7-ASMTA0A0B4J1R7 106 aa15.1■□□□□ 0.01
PTPRA-205ENST00000399903 GABRA4P48169 554 aa15.1■□□□□ 0.01
PTPRA-205ENST00000399903 KIAA0895LQ68EN5 471 aa15.1■□□□□ 0.01
PTPRA-205ENST00000399903 OOSP2Q86WS3 158 aa15.1■□□□□ 0.01
PTPRA-205ENST00000399903 TSTD1Q8NFU3 115 aa15.1■□□□□ 0.01
PTPRA-205ENST00000399903 OR13G1Q8NGZ3 307 aa15.1■□□□□ 0.01
PTPRA-205ENST00000399903 RTBDNQ9BSG5 229 aaPredicted RBP15.1■□□□□ 0.01
PTPRA-205ENST00000399903 DNAJB11Q9UBS4 358 aa15.1■□□□□ 0.01
PTPRA-205ENST00000399903 RHBDD3Q9Y3P4 386 aa15.1■□□□□ 0.01
PTPRA-205ENST00000399903 HS3ST3B1Q9Y662 390 aa15.1■□□□□ 0.01
PTPRA-205ENST00000399903 SMCO3A2RU48 225 aa15.1■□□□□ 0.01
PTPRA-205ENST00000399903 PRSS37A4D1T9 235 aa15.1■□□□□ 0.01
PTPRA-205ENST00000399903 TGFBR3LH3BV60 316 aa15.1■□□□□ 0.01
PTPRA-205ENST00000399903 NUDT21O43809 227 aaKnown RBP15.1■□□□□ 0.01
PTPRA-205ENST00000399903 PNMTP11086 282 aa15.1■□□□□ 0.01
PTPRA-205ENST00000399903 SNU13P55769 128 aaKnown RBP15.1■□□□□ 0.01
PTPRA-205ENST00000399903 PKIAP61925 76 aa15.1■□□□□ 0.01
PTPRA-205ENST00000399903 INSM1Q01101 510 aaPredicted RBP15.1■□□□□ 0.01
PTPRA-205ENST00000399903 RBM14Q96PK6 669 aaKnown RBP15.1■□□□□ 0.01
PTPRA-205ENST00000399903 GPX7Q96SL4 187 aaPredicted RBP15.1■□□□□ 0.01
PTPRA-205ENST00000399903 SOHLH2Q9NX45 425 aa15.1■□□□□ 0.01
PTPRA-205ENST00000399903 B3GALT1Q9Y5Z6 326 aa15.1■□□□□ 0.01
PTPRA-205ENST00000399903 POMT1Q9Y6A1 747 aa15.1■□□□□ 0.01
PTPRA-205ENST00000399903 ZDBF2Q9HCK1 2354 aa15.09■□□□□ 0.01
PTPRA-205ENST00000399903 OR5H15A6NDH6 313 aa15.09■□□□□ 0.01
PTPRA-205ENST00000399903 OR5H1A6NKK0 313 aa15.09■□□□□ 0.01
PTPRA-205ENST00000399903 SEC14L6B5MCN3 397 aa15.09■□□□□ 0.01
PTPRA-205ENST00000399903 H3BQ15 152 aa15.09■□□□□ 0.01
PTPRA-205ENST00000399903 TNFRSF10CO14798 259 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms