RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 ERVS71-1P61550 626 aa11.73□□□□□ -0.53
VAPB-202ENST00000395802 HES5Q5TA89 166 aa11.73□□□□□ -0.53
VAPB-202ENST00000395802 OR13G1Q8NGZ3 307 aa11.73□□□□□ -0.53
VAPB-202ENST00000395802 FAM222BQ8WU58 562 aa11.73□□□□□ -0.53
VAPB-202ENST00000395802 TMEM171Q8WVE6 324 aa11.73□□□□□ -0.53
VAPB-202ENST00000395802 MICU1Q9BPX6 476 aa11.73□□□□□ -0.53
VAPB-202ENST00000395802 DUSP13Q9UII6 198 aa11.73□□□□□ -0.53
VAPB-202ENST00000395802 KLF2Q9Y5W3 355 aaPredicted RBP11.73□□□□□ -0.53
VAPB-202ENST00000395802 ATP23Q9Y6H3 246 aa11.73□□□□□ -0.53
VAPB-202ENST00000395802 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.72□□□□□ -0.53
VAPB-202ENST00000395802 ZNF780AO75290 641 aaPredicted RBP11.72□□□□□ -0.53
VAPB-202ENST00000395802 PAHP00439 452 aa11.72□□□□□ -0.53
VAPB-202ENST00000395802 EVX1P49640 407 aa11.72□□□□□ -0.53
VAPB-202ENST00000395802 CNIH2Q6PI25 160 aa11.72□□□□□ -0.53
VAPB-202ENST00000395802 LRRC28Q86X40 367 aaPredicted RBP11.72□□□□□ -0.53
VAPB-202ENST00000395802 TRMT10AQ8TBZ6 339 aaKnown RBP11.72□□□□□ -0.53
VAPB-202ENST00000395802 SOSTQ9BQB4 213 aa11.72□□□□□ -0.53
VAPB-202ENST00000395802 RTL8AQ9BWD3 113 aa11.72□□□□□ -0.53
VAPB-202ENST00000395802 CNTD2Q9H8S5 307 aa11.72□□□□□ -0.53
VAPB-202ENST00000395802 RNF115Q9Y4L5 304 aa11.72□□□□□ -0.53
VAPB-202ENST00000395802 IGLV3-9A0A075B6K5 115 aa11.72□□□□□ -0.53
VAPB-202ENST00000395802 A0A0B4J203 849 aa11.72□□□□□ -0.53
VAPB-202ENST00000395802 LOC100289279A0A1B0GTE1 492 aa11.72□□□□□ -0.53
VAPB-202ENST00000395802 FAM230AA0A1W2PPH8 454 aa11.72□□□□□ -0.53
VAPB-202ENST00000395802 GOSR1O95249 250 aa11.72□□□□□ -0.53
VAPB-202ENST00000395802 BPNT1O95861 308 aa11.72□□□□□ -0.53
VAPB-202ENST00000395802 CYB5AP00167 134 aa11.72□□□□□ -0.53
VAPB-202ENST00000395802 ELK1P19419 428 aa11.72□□□□□ -0.53
VAPB-202ENST00000395802 PRSS12P56730 875 aa11.72□□□□□ -0.53
VAPB-202ENST00000395802 GNG3P63215 75 aa11.72□□□□□ -0.53
VAPB-202ENST00000395802 GPR176Q14439 515 aa11.72□□□□□ -0.53
VAPB-202ENST00000395802 AWAT2Q6E213 333 aa11.72□□□□□ -0.53
VAPB-202ENST00000395802 FAM166AQ6J272 317 aa11.72□□□□□ -0.53
VAPB-202ENST00000395802 VHLLQ6RSH7 139 aa11.72□□□□□ -0.53
VAPB-202ENST00000395802 ANGPTL5Q86XS5 388 aa11.72□□□□□ -0.53
VAPB-202ENST00000395802 ZNF573Q86YE8 665 aa11.72□□□□□ -0.53
VAPB-202ENST00000395802 SAMD12Q8N8I0 201 aa11.72□□□□□ -0.53
VAPB-202ENST00000395802 SSC4DQ8WTU2 575 aa11.72□□□□□ -0.53
VAPB-202ENST00000395802 OR5P3Q8WZ94 311 aa11.72□□□□□ -0.53
VAPB-202ENST00000395802 MRPL24Q96A35 216 aaKnown RBP11.72□□□□□ -0.53
VAPB-202ENST00000395802 PTX4Q96A99 478 aa11.72□□□□□ -0.53
VAPB-202ENST00000395802 FAM3DQ96BQ1 224 aa11.72□□□□□ -0.53
VAPB-202ENST00000395802 CCDC32Q9BV29 185 aa11.72□□□□□ -0.53
VAPB-202ENST00000395802 SRRQ9GZT4 340 aa11.72□□□□□ -0.53
VAPB-202ENST00000395802 NPDC1Q9NQX5 325 aaPredicted RBP11.72□□□□□ -0.53
VAPB-202ENST00000395802 RABL2AQ9UBK7 228 aaPredicted RBP11.72□□□□□ -0.53
VAPB-202ENST00000395802 RABL2BQ9UNT1 228 aa11.72□□□□□ -0.53
VAPB-202ENST00000395802 ADGRG4Q8IZF6 3080 aa11.71□□□□□ -0.53
VAPB-202ENST00000395802 SPTBN1Q01082 2364 aaKnown RBP11.71□□□□□ -0.53
VAPB-202ENST00000395802 FABP12A6NFH5 140 aa11.71□□□□□ -0.54
VAPB-202ENST00000395802 WIPF3A6NGB9 483 aa11.71□□□□□ -0.54
VAPB-202ENST00000395802 APOA1P02647 267 aa11.71□□□□□ -0.54
VAPB-202ENST00000395802 EIF4EP06730 217 aaKnown RBP11.71□□□□□ -0.54
VAPB-202ENST00000395802 SNRPBP14678 240 aaKnown RBP11.71□□□□□ -0.54
VAPB-202ENST00000395802 CA6P23280 308 aa11.71□□□□□ -0.54
VAPB-202ENST00000395802 MPV17P39210 176 aa11.71□□□□□ -0.54
VAPB-202ENST00000395802 PTGFRP43088 359 aa11.71□□□□□ -0.54
VAPB-202ENST00000395802 ALDH3B1P43353 468 aa11.71□□□□□ -0.54
VAPB-202ENST00000395802 OR8G1Q15617 311 aa11.71□□□□□ -0.54
VAPB-202ENST00000395802 ZNF181Q2M3W8 571 aa11.71□□□□□ -0.54
VAPB-202ENST00000395802 UBE2NLQ5JXB2 153 aa11.71□□□□□ -0.54
VAPB-202ENST00000395802 ADAM5Q6NVV9 412 aa11.71□□□□□ -0.54
VAPB-202ENST00000395802 METAP1DQ6UB28 335 aaPredicted RBP11.71□□□□□ -0.54
VAPB-202ENST00000395802 FAM131AQ6UXB0 335 aa11.71□□□□□ -0.54
VAPB-202ENST00000395802 LYPD6Q86Y78 171 aa11.71□□□□□ -0.54
VAPB-202ENST00000395802 OR5H6Q8NGV6 325 aa11.71□□□□□ -0.54
VAPB-202ENST00000395802 NPRL2Q8WTW4 380 aa11.71□□□□□ -0.54
VAPB-202ENST00000395802 ITPKCQ96DU7 683 aa11.71□□□□□ -0.54
VAPB-202ENST00000395802 RNF170Q96K19 258 aa11.71□□□□□ -0.54
VAPB-202ENST00000395802 CST11Q9H112 138 aa11.71□□□□□ -0.54
VAPB-202ENST00000395802 PLK3Q9H4B4 646 aa11.71□□□□□ -0.54
VAPB-202ENST00000395802 C14orf119Q9NWQ9 140 aa11.71□□□□□ -0.54
VAPB-202ENST00000395802 PRR14LQ5THK1 2151 aa11.7□□□□□ -0.54
VAPB-202ENST00000395802 A0A1B0GVG6 124 aa11.7□□□□□ -0.54
VAPB-202ENST00000395802 TMEM210A6NLX4 147 aa11.7□□□□□ -0.54
VAPB-202ENST00000395802 STEAP3Q658P3 488 aa11.7□□□□□ -0.54
VAPB-202ENST00000395802 LYSMD2Q8IV50 215 aa11.7□□□□□ -0.54
VAPB-202ENST00000395802 ZSCAN4Q8NAM6 433 aaPredicted RBP11.7□□□□□ -0.54
VAPB-202ENST00000395802 LGALS14Q8TCE9 139 aa11.7□□□□□ -0.54
VAPB-202ENST00000395802 RAB40AQ8WXH6 277 aa11.7□□□□□ -0.54
VAPB-202ENST00000395802 PHF21AQ96BD5 680 aa11.7□□□□□ -0.54
VAPB-202ENST00000395802 ADAT1Q9BUB4 502 aaKnown RBP11.7□□□□□ -0.54
VAPB-202ENST00000395802 PPP1R3EQ9H7J1 279 aa11.7□□□□□ -0.54
VAPB-202ENST00000395802 ABCB10Q9NRK6 738 aa11.7□□□□□ -0.54
VAPB-202ENST00000395802 CRIM1Q9NZV1 1036 aa11.7□□□□□ -0.54
VAPB-202ENST00000395802 FBXO9Q9UK97 447 aaPredicted RBP11.7□□□□□ -0.54
VAPB-202ENST00000395802 MRPS28Q9Y2Q9 187 aaKnown RBP11.7□□□□□ -0.54
VAPB-202ENST00000395802 MYO18BQ8IUG5 2567 aa11.7□□□□□ -0.54
VAPB-202ENST00000395802 HCFC1P51610 2035 aa11.7□□□□□ -0.54
VAPB-202ENST00000395802 METTL21EPA6NDL7 271 aa11.7□□□□□ -0.54
VAPB-202ENST00000395802 FAM25AB3EWG3 89 aa11.7□□□□□ -0.54
VAPB-202ENST00000395802 FAM25CB3EWG5 89 aa11.7□□□□□ -0.54
VAPB-202ENST00000395802 FAM25GB3EWG6 89 aa11.7□□□□□ -0.54
VAPB-202ENST00000395802 SCGNO76038 276 aa11.7□□□□□ -0.54
VAPB-202ENST00000395802 PTBP1P26599 531 aaKnown RBP eCLIP11.7□□□□□ -0.547e-7■■■■■ 38.5
VAPB-202ENST00000395802 APOBEC3AP31941 199 aaPredicted RBP11.7□□□□□ -0.54
VAPB-202ENST00000395802 POU3F4P49335 361 aa11.7□□□□□ -0.54
VAPB-202ENST00000395802 ART1P52961 327 aa11.7□□□□□ -0.54
VAPB-202ENST00000395802 SNTB1Q13884 538 aaKnown RBP11.7□□□□□ -0.54
VAPB-202ENST00000395802 NKPD1Q17RQ9 610 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms