RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 RAB32Q13637 225 aa22.19■■□□□ 1.14
C9orf40-201ENST00000376854 C10orf128Q5T292 105 aa22.19■■□□□ 1.14
C9orf40-201ENST00000376854 LYSMD4Q5XG99 296 aa22.19■■□□□ 1.14
C9orf40-201ENST00000376854 DTX1Q86Y01 620 aa22.19■■□□□ 1.14
C9orf40-201ENST00000376854 FAM219AQ8IW50 185 aa22.19■■□□□ 1.14
C9orf40-201ENST00000376854 SVBPQ8N300 66 aa22.19■■□□□ 1.14
C9orf40-201ENST00000376854 RHBDD1Q8TEB9 315 aa22.19■■□□□ 1.14
C9orf40-201ENST00000376854 MED12Q93074 2177 aa22.19■■□□□ 1.14
C9orf40-201ENST00000376854 AQP10Q96PS8 301 aa22.19■■□□□ 1.14
C9orf40-201ENST00000376854 MRPL14Q6P1L8 145 aaKnown RBP22.18■■□□□ 1.14
C9orf40-201ENST00000376854 POC1AQ8NBT0 407 aa22.18■■□□□ 1.14
C9orf40-201ENST00000376854 OR5T2Q8NGG2 359 aa22.18■■□□□ 1.14
C9orf40-201ENST00000376854 OR51F2Q8NH61 342 aa22.18■■□□□ 1.14
C9orf40-201ENST00000376854 PP6455Q8WZ26 134 aa22.18■■□□□ 1.14
C9orf40-201ENST00000376854 EMG1Q92979 244 aaKnown RBP22.18■■□□□ 1.14
C9orf40-201ENST00000376854 TMEM54Q969K7 222 aa22.18■■□□□ 1.14
C9orf40-201ENST00000376854 NECAB3Q96P71 396 aaPredicted RBP22.18■■□□□ 1.14
C9orf40-201ENST00000376854 ZNF385AQ96PM9 386 aaKnown RBP22.18■■□□□ 1.14
C9orf40-201ENST00000376854 PURGQ9UJV8 347 aaKnown RBP22.18■■□□□ 1.14
C9orf40-201ENST00000376854 PIGLQ9Y2B2 252 aa22.18■■□□□ 1.14
C9orf40-201ENST00000376854 IGHV3-15A0A0B4J1V0 119 aa22.18■■□□□ 1.14
C9orf40-201ENST00000376854 CELA2AP08217 269 aa22.18■■□□□ 1.14
C9orf40-201ENST00000376854 ADCYAP1P18509 176 aa22.18■■□□□ 1.14
C9orf40-201ENST00000376854 PLEKHN1Q494U1 663 aaPredicted RBP22.18■■□□□ 1.14
C9orf40-201ENST00000376854 DRAM2Q6UX65 266 aa22.18■■□□□ 1.14
C9orf40-201ENST00000376854 PUSL1Q8N0Z8 303 aaKnown RBP22.18■■□□□ 1.14
C9orf40-201ENST00000376854 CHST5Q9GZS9 411 aa22.18■■□□□ 1.14
C9orf40-201ENST00000376854 PRO3102Q9H379 93 aa22.18■■□□□ 1.14
C9orf40-201ENST00000376854 ZNF701Q9NV72 531 aaPredicted RBP22.18■■□□□ 1.14
C9orf40-201ENST00000376854 GSKIPQ9P0R6 139 aa22.18■■□□□ 1.14
C9orf40-201ENST00000376854 SIT1Q9Y3P8 196 aa22.18■■□□□ 1.14
C9orf40-201ENST00000376854 KNG1P01042 644 aa22.17■■□□□ 1.14
C9orf40-201ENST00000376854 PET100P0DJ07 73 aa22.17■■□□□ 1.14
C9orf40-201ENST00000376854 SLC16A14Q7RTX9 510 aa22.17■■□□□ 1.14
C9orf40-201ENST00000376854 SAP25Q8TEE9 199 aa22.17■■□□□ 1.14
C9orf40-201ENST00000376854 PIGTQ969N2 578 aa22.17■■□□□ 1.14
C9orf40-201ENST00000376854 NABP1Q96AH0 204 aa22.17■■□□□ 1.14
C9orf40-201ENST00000376854 TM2D1Q9BX74 207 aa22.17■■□□□ 1.14
C9orf40-201ENST00000376854 OCIAD1Q9NX40 245 aa22.17■■□□□ 1.14
C9orf40-201ENST00000376854 A0A087WZY1 265 aa22.17■■□□□ 1.14
C9orf40-201ENST00000376854 FIGNL2A6NMB9 653 aa22.17■■□□□ 1.14
C9orf40-201ENST00000376854 CSTBP04080 98 aaKnown RBP22.17■■□□□ 1.14
C9orf40-201ENST00000376854 HOXB5P09067 269 aa22.17■■□□□ 1.14
C9orf40-201ENST00000376854 FAM157CP0CG43 387 aa22.17■■□□□ 1.14
C9orf40-201ENST00000376854 CPT2P23786 658 aa22.17■■□□□ 1.14
C9orf40-201ENST00000376854 SRSF3P84103 164 aaKnown RBP22.17■■□□□ 1.14
C9orf40-201ENST00000376854 PCOLCEQ15113 449 aa22.17■■□□□ 1.14
C9orf40-201ENST00000376854 STK11Q15831 433 aa22.17■■□□□ 1.14
C9orf40-201ENST00000376854 GUCA2BQ16661 112 aa22.17■■□□□ 1.14
C9orf40-201ENST00000376854 RSPO1Q2MKA7 263 aaPredicted RBP22.17■■□□□ 1.14
C9orf40-201ENST00000376854 HAS2Q92819 552 aa22.17■■□□□ 1.14
C9orf40-201ENST00000376854 RBM24Q9BX46 236 aaKnown RBP22.17■■□□□ 1.14
C9orf40-201ENST00000376854 ZNF629Q9UEG4 869 aaPredicted RBP22.17■■□□□ 1.14
C9orf40-201ENST00000376854 S100A10P60903 97 aa22.16■■□□□ 1.14
C9orf40-201ENST00000376854 SURF2Q15527 256 aaPredicted RBP22.16■■□□□ 1.14
C9orf40-201ENST00000376854 OR2S2Q9NQN1 319 aa22.16■■□□□ 1.14
C9orf40-201ENST00000376854 C14orf166Q9Y224 244 aaKnown RBP22.16■■□□□ 1.14
C9orf40-201ENST00000376854 NUDT19A8MXV4 375 aa22.15■■□□□ 1.14
C9orf40-201ENST00000376854 NPIPA2E9PIF3 369 aa22.15■■□□□ 1.14
C9orf40-201ENST00000376854 NPIPA3F8WFD2 350 aa22.15■■□□□ 1.14
C9orf40-201ENST00000376854 IL32P24001 234 aa22.15■■□□□ 1.14
C9orf40-201ENST00000376854 ARL6IP1Q15041 203 aa22.15■■□□□ 1.14
C9orf40-201ENST00000376854 RAET1LQ5VY80 246 aa22.15■■□□□ 1.14
C9orf40-201ENST00000376854 NSUN5P2Q63ZY6 315 aa22.15■■□□□ 1.14
C9orf40-201ENST00000376854 TMEM200AQ86VY9 491 aa22.15■■□□□ 1.14
C9orf40-201ENST00000376854 SLC5A7Q9GZV3 580 aa22.15■■□□□ 1.14
C9orf40-201ENST00000376854 MMP26Q9NRE1 261 aa22.15■■□□□ 1.14
C9orf40-201ENST00000376854 COL6A3P12111 3177 aa22.15■■□□□ 1.14
C9orf40-201ENST00000376854 ZNF705EA8MWA4 302 aaPredicted RBP22.15■■□□□ 1.14
C9orf40-201ENST00000376854 IL15RAQ13261 267 aa22.15■■□□□ 1.14
C9orf40-201ENST00000376854 FOXL2NBQ6ZUU3 175 aa22.15■■□□□ 1.14
C9orf40-201ENST00000376854 GALNTL5Q7Z4T8 443 aa22.15■■□□□ 1.14
C9orf40-201ENST00000376854 C6orf201Q7Z4U5 140 aa22.15■■□□□ 1.14
C9orf40-201ENST00000376854 GNRHR2Q96P88 292 aa22.15■■□□□ 1.14
C9orf40-201ENST00000376854 UCN2Q96RP3 112 aa22.15■■□□□ 1.14
C9orf40-201ENST00000376854 DNAJB11Q9UBS4 358 aa22.15■■□□□ 1.14
C9orf40-201ENST00000376854 F8W036 122 aa22.14■■□□□ 1.14
C9orf40-201ENST00000376854 M0R135 149 aa22.14■■□□□ 1.14
C9orf40-201ENST00000376854 DHHO43323 396 aa22.14■■□□□ 1.14
C9orf40-201ENST00000376854 MTRF1O75570 445 aaKnown RBP22.14■■□□□ 1.14
C9orf40-201ENST00000376854 DBHP09172 617 aa22.14■■□□□ 1.14
C9orf40-201ENST00000376854 BLOC1S1P78537 153 aa22.14■■□□□ 1.14
C9orf40-201ENST00000376854 RSPO4Q2I0M5 234 aaPredicted RBP22.14■■□□□ 1.14
C9orf40-201ENST00000376854 HLA-BQ31612 363 aa22.14■■□□□ 1.14
C9orf40-201ENST00000376854 OR4A4PQ8NGN8 299 aa22.14■■□□□ 1.14
C9orf40-201ENST00000376854 ZNF799Q96GE5 643 aa22.14■■□□□ 1.14
C9orf40-201ENST00000376854 CNTNAP3BQ96NU0 1288 aa22.14■■□□□ 1.14
C9orf40-201ENST00000376854 MCTS1Q9ULC4 181 aaKnown RBP22.14■■□□□ 1.14
C9orf40-201ENST00000376854 EIF1BO60739 113 aaKnown RBP22.14■■□□□ 1.13
C9orf40-201ENST00000376854 SFTPBP07988 381 aa22.14■■□□□ 1.13
C9orf40-201ENST00000376854 CD63P08962 238 aa22.14■■□□□ 1.13
C9orf40-201ENST00000376854 GABRR1P24046 479 aa22.14■■□□□ 1.13
C9orf40-201ENST00000376854 HIST1H3AP68431 136 aa22.14■■□□□ 1.13
C9orf40-201ENST00000376854 SCRN3Q0VDG4 424 aa22.14■■□□□ 1.13
C9orf40-201ENST00000376854 HIST2H3PS2Q5TEC6 136 aa22.14■■□□□ 1.13
C9orf40-201ENST00000376854 HIST2H3AQ71DI3 136 aa22.14■■□□□ 1.13
C9orf40-201ENST00000376854 LDLRAD3Q86YD5 345 aa22.14■■□□□ 1.13
C9orf40-201ENST00000376854 TMEM123Q8N131 208 aa22.14■■□□□ 1.13
C9orf40-201ENST00000376854 PLEK2Q9NYT0 353 aa22.14■■□□□ 1.13
C9orf40-201ENST00000376854 LPAR3Q9UBY5 353 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms