RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 ZBTB34Q8NCN2 500 aa5.97□□□□□ -1.45
UBR4-204ENST00000375254 YBX1P67809 324 aaKnown RBP5.96□□□□□ -1.45
UBR4-204ENST00000375254 IFITM3Q01628 133 aa5.96□□□□□ -1.45
UBR4-204ENST00000375254 SRSF5Q13243 272 aaKnown RBP5.96□□□□□ -1.45
UBR4-204ENST00000375254 MAS1LP35410 378 aa5.96□□□□□ -1.45
UBR4-204ENST00000375254 SLC35B1P78383 322 aa5.96□□□□□ -1.45
UBR4-204ENST00000375254 DOLPP1Q86YN1 238 aa5.96□□□□□ -1.45
UBR4-204ENST00000375254 LEPROTL1O95214 131 aa5.96□□□□□ -1.45
UBR4-204ENST00000375254 IL4P05112 153 aa5.96□□□□□ -1.45
UBR4-204ENST00000375254 FLT3LGP49771 235 aa5.96□□□□□ -1.45
UBR4-204ENST00000375254 RNFT1Q5M7Z0 435 aa5.96□□□□□ -1.45
UBR4-204ENST00000375254 SLC26A1Q9H2B4 701 aa5.96□□□□□ -1.45
UBR4-204ENST00000375254 MAP1LC3AQ9H492 121 aa5.96□□□□□ -1.45
UBR4-204ENST00000375254 TECRQ9NZ01 308 aaKnown RBP5.96□□□□□ -1.45
UBR4-204ENST00000375254 GABRQQ9UN88 632 aa5.96□□□□□ -1.45
UBR4-204ENST00000375254 TRAV27A0A087WT01 109 aa5.96□□□□□ -1.45
UBR4-204ENST00000375254 SLC25A26Q70HW3 274 aa5.96□□□□□ -1.45
UBR4-204ENST00000375254 MDGA1Q8NFP4 955 aa5.96□□□□□ -1.45
UBR4-204ENST00000375254 TAAR6Q96RI8 345 aa5.96□□□□□ -1.45
UBR4-204ENST00000375254 ABCA8O94911 1581 aa5.96□□□□□ -1.45
UBR4-204ENST00000375254 SERTM1A2A2V5 107 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 TMEM250H0YL14 139 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 DUSP28Q4G0W2 176 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 FADS6Q8N9I5 356 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 PLA2G12AQ9BZM1 189 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 TRAV9-2A0A087WT02 112 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 KLRG1Q96E93 195 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 TOX2Q96NM4 488 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 TSPAN32Q96QS1 320 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 FAM189BP81408 668 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 C1orf185Q5T7R7 199 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 MARCH1Q8TCQ1 289 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 CISD1Q9NZ45 108 aaKnown RBP5.96□□□□□ -1.46
UBR4-204ENST00000375254 CHTOPQ9Y3Y2 248 aaKnown RBP5.96□□□□□ -1.46
UBR4-204ENST00000375254 ZNF318Q5VUA4 2279 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 CACNA1CQ13936 2221 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 GAGE12BA1L429 117 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 FITM1A5D6W6 292 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 J3KTA2 159 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 MOSPD3O75425 235 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 WNT3P56703 355 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 DCDP81605 110 aaKnown RBP5.96□□□□□ -1.46
UBR4-204ENST00000375254 SMAD2Q15796 467 aaKnown RBP5.96□□□□□ -1.46
UBR4-204ENST00000375254 CPEB2Q7Z5Q1 589 aaKnown RBP5.96□□□□□ -1.46
UBR4-204ENST00000375254 PLPP7Q8NBV4 271 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 GABRG3Q99928 467 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 MEGF9Q9H1U4 602 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 GDE1Q9NZC3 331 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 APLNRP35414 380 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 PPP2CBP62714 309 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 NTHL1P78549 312 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 SOX4Q06945 474 aaPredicted RBP5.96□□□□□ -1.46
UBR4-204ENST00000375254 BATF2Q8N1L9 274 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 SLC7A10Q9NS82 523 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 CEP290O15078 2479 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 C17orf67Q0P5P2 114 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 OR14C36Q8NHC7 312 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 TTTY10Q9BZA0 68 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 IL17CQ9P0M4 197 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 OR8G3PP0DMU2 310 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 CLEC12BQ2HXU8 276 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 VAX1Q5SQQ9 334 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 LIMS2Q7Z4I7 341 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 ERGIC1Q969X5 290 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 P2RY12Q9H244 342 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 ELOVL5Q9NYP7 299 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 TIMP2P16035 220 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 HOXC5Q00444 222 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 EIF3IQ13347 325 aaKnown RBP5.96□□□□□ -1.46
UBR4-204ENST00000375254 HSF5Q4G112 596 aaPredicted RBP5.96□□□□□ -1.46
UBR4-204ENST00000375254 CELF5Q8N6W0 485 aaKnown RBP5.96□□□□□ -1.46
UBR4-204ENST00000375254 MS4A6AQ9H2W1 248 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 AP5S1Q9NUS5 200 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 IGKV6D-41A0A0C4DH26 115 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 A8MWL6 223 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 ZNF732B4DXR9 585 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 CST7O76096 145 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 SMAGPQ0VAQ4 97 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 PRICKLE4Q2TBC4 344 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 OCIAD2Q56VL3 154 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 C6orf132Q5T0Z8 1188 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 TEX37Q96LM6 180 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 HIST1H4GQ99525 98 aa5.96□□□□□ -1.46
UBR4-204ENST00000375254 C1QTNF9BB2RNN3 333 aa5.95□□□□□ -1.46
UBR4-204ENST00000375254 ALOX5APP20292 161 aa5.95□□□□□ -1.46
UBR4-204ENST00000375254 ROM1Q03395 351 aa5.95□□□□□ -1.46
UBR4-204ENST00000375254 POM121L1PQ3SYA9 428 aa5.95□□□□□ -1.46
UBR4-204ENST00000375254 HIKESHIQ53FT3 197 aa5.95□□□□□ -1.46
UBR4-204ENST00000375254 GALMQ96C23 342 aa5.95□□□□□ -1.46
UBR4-204ENST00000375254 C19orf24Q9BVV8 132 aa5.95□□□□□ -1.46
UBR4-204ENST00000375254 TBPL1P62380 186 aa5.95□□□□□ -1.46
UBR4-204ENST00000375254 SMIM21Q3B7S5 101 aa5.95□□□□□ -1.46
UBR4-204ENST00000375254 GDF6Q6KF10 455 aaPredicted RBP5.95□□□□□ -1.46
UBR4-204ENST00000375254 RNASEH2CQ8TDP1 164 aaKnown RBP5.95□□□□□ -1.46
UBR4-204ENST00000375254 EDARADDQ8WWZ3 215 aa5.95□□□□□ -1.46
UBR4-204ENST00000375254 SLX1AQ9BQ83 275 aa5.95□□□□□ -1.46
UBR4-204ENST00000375254 HIF1ANQ9NWT6 349 aa5.95□□□□□ -1.46
UBR4-204ENST00000375254 HLA-DQB1P01920 261 aa5.95□□□□□ -1.46
UBR4-204ENST00000375254 FTH1P19P0C7X4 201 aa5.95□□□□□ -1.46
UBR4-204ENST00000375254 CPMP14384 443 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms