RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 UBE2V2Q15819 145 aa12.24□□□□□ -0.45
USF1-202ENST00000368020 HYAL4Q2M3T9 481 aa12.24□□□□□ -0.45
USF1-202ENST00000368020 LHFPL2Q6ZUX7 228 aa12.24□□□□□ -0.45
USF1-202ENST00000368020 LYG2Q86SG7 212 aa12.24□□□□□ -0.45
USF1-202ENST00000368020 VASH2Q86V25 355 aa12.24□□□□□ -0.45
USF1-202ENST00000368020 OR4S1Q8NGB4 309 aa12.24□□□□□ -0.45
USF1-202ENST00000368020 OR51T1Q8NGJ9 327 aa12.24□□□□□ -0.45
USF1-202ENST00000368020 OR13C8Q8NGS7 320 aa12.24□□□□□ -0.45
USF1-202ENST00000368020 SGK3Q96BR1 496 aa12.24□□□□□ -0.45
USF1-202ENST00000368020 SPACA5Q96QH8 159 aa12.24□□□□□ -0.45
USF1-202ENST00000368020 SOX7Q9BT81 388 aa12.24□□□□□ -0.45
USF1-202ENST00000368020 OR2H1Q9GZK4 316 aa12.24□□□□□ -0.45
USF1-202ENST00000368020 PINLYPA6NC86 204 aa12.23□□□□□ -0.45
USF1-202ENST00000368020 ZNF891A8MT65 544 aaPredicted RBP12.23□□□□□ -0.45
USF1-202ENST00000368020 ZNF724A8MTY0 619 aa12.23□□□□□ -0.45
USF1-202ENST00000368020 RPL36A-HNRNPH2H7BZ11 118 aa12.23□□□□□ -0.45
USF1-202ENST00000368020 SSX5O60225 188 aa12.23□□□□□ -0.45
USF1-202ENST00000368020 HLA-AP01891 365 aaKnown RBP12.23□□□□□ -0.45
USF1-202ENST00000368020 B4GALT1P15291 398 aa12.23□□□□□ -0.45
USF1-202ENST00000368020 ZNF708P17019 499 aa12.23□□□□□ -0.45
USF1-202ENST00000368020 HLA-GP17693 338 aa12.23□□□□□ -0.45
USF1-202ENST00000368020 CD34P28906 385 aa12.23□□□□□ -0.45
USF1-202ENST00000368020 RRADP55042 308 aa12.23□□□□□ -0.45
USF1-202ENST00000368020 H2BFSP57053 126 aa12.23□□□□□ -0.45
USF1-202ENST00000368020 RAB14P61106 215 aa12.23□□□□□ -0.45
USF1-202ENST00000368020 SEC61A1P61619 476 aaKnown RBP12.23□□□□□ -0.45
USF1-202ENST00000368020 SRSF4Q08170 494 aaKnown RBP12.23□□□□□ -0.45
USF1-202ENST00000368020 DHRS2Q13268 280 aa12.23□□□□□ -0.45
USF1-202ENST00000368020 ARFRP1Q13795 201 aa12.23□□□□□ -0.45
USF1-202ENST00000368020 GRK1Q15835 563 aa12.23□□□□□ -0.45
USF1-202ENST00000368020 ZNF774Q6NX45 483 aa12.23□□□□□ -0.45
USF1-202ENST00000368020 CD163Q86VB7 1156 aa12.23□□□□□ -0.45
USF1-202ENST00000368020 ZNF837Q96EG3 531 aaPredicted RBP12.23□□□□□ -0.45
USF1-202ENST00000368020 ELMOD3Q96FG2 381 aa12.23□□□□□ -0.45
USF1-202ENST00000368020 POM121Q96HA1 1249 aa12.23□□□□□ -0.45
USF1-202ENST00000368020 PHB2Q99623 299 aa12.23□□□□□ -0.45
USF1-202ENST00000368020 NICN1Q9BSH3 213 aa12.23□□□□□ -0.45
USF1-202ENST00000368020 TTTY12Q9BZ98 90 aa12.23□□□□□ -0.45
USF1-202ENST00000368020 A0A0A6YYD4 124 aa12.23□□□□□ -0.45
USF1-202ENST00000368020 A6NL46 340 aa12.23□□□□□ -0.45
USF1-202ENST00000368020 CEACAM18A8MTB9 384 aa12.23□□□□□ -0.45
USF1-202ENST00000368020 E9PLN8 166 aa12.23□□□□□ -0.45
USF1-202ENST00000368020 ACTL6AO96019 429 aa12.23□□□□□ -0.45
USF1-202ENST00000368020 IL2RAP01589 272 aa12.23□□□□□ -0.45
USF1-202ENST00000368020 LCATP04180 440 aa12.23□□□□□ -0.45
USF1-202ENST00000368020 DBHP09172 617 aa12.23□□□□□ -0.45
USF1-202ENST00000368020 ZNF35P13682 527 aa12.23□□□□□ -0.45
USF1-202ENST00000368020 ECI1P42126 302 aa12.23□□□□□ -0.45
USF1-202ENST00000368020 CLDN18P56856 261 aa12.23□□□□□ -0.45
USF1-202ENST00000368020 SOX8P57073 446 aa12.23□□□□□ -0.45
USF1-202ENST00000368020 PLGLB1Q02325 96 aa12.23□□□□□ -0.45
USF1-202ENST00000368020 OPCMLQ14982 345 aa12.23□□□□□ -0.45
USF1-202ENST00000368020 RNPS1Q15287 305 aaKnown RBP12.23□□□□□ -0.45
USF1-202ENST00000368020 NKPD1Q17RQ9 610 aa12.23□□□□□ -0.45
USF1-202ENST00000368020 SNAI3Q3KNW1 292 aa12.23□□□□□ -0.45
USF1-202ENST00000368020 PLAC9Q5JTB6 97 aa12.23□□□□□ -0.45
USF1-202ENST00000368020 GVQW1Q8N7I0 195 aa12.23□□□□□ -0.45
USF1-202ENST00000368020 OR5M8Q8NGP6 311 aa12.23□□□□□ -0.45
USF1-202ENST00000368020 TERB2Q8NHR7 220 aa12.23□□□□□ -0.45
USF1-202ENST00000368020 ABHD3Q8WU67 409 aa12.23□□□□□ -0.45
USF1-202ENST00000368020 SIGLEC12Q96PQ1 595 aa12.23□□□□□ -0.45
USF1-202ENST00000368020 PRDM14Q9GZV8 571 aa12.23□□□□□ -0.45
USF1-202ENST00000368020 METTL9Q9H1A3 318 aa12.23□□□□□ -0.45
USF1-202ENST00000368020 BANF2Q9H503 90 aa12.23□□□□□ -0.45
USF1-202ENST00000368020 FREM2Q5SZK8 3169 aa12.22□□□□□ -0.45
USF1-202ENST00000368020 MCRIP1C9JLW8 97 aa12.22□□□□□ -0.45
USF1-202ENST00000368020 ZNF587BE7ETH6 402 aa12.22□□□□□ -0.45
USF1-202ENST00000368020 SOCS1O15524 211 aa12.22□□□□□ -0.45
USF1-202ENST00000368020 NME2P1O60361 137 aa12.22□□□□□ -0.45
USF1-202ENST00000368020 CD8AP01732 235 aa12.22□□□□□ -0.45
USF1-202ENST00000368020 COX5BP10606 129 aa12.22□□□□□ -0.45
USF1-202ENST00000368020 CD46P15529 392 aa12.22□□□□□ -0.45
USF1-202ENST00000368020 NME2P22392 152 aa12.22□□□□□ -0.45
USF1-202ENST00000368020 MTCP1P56278 107 aa12.22□□□□□ -0.45
USF1-202ENST00000368020 PSG4Q00888 419 aa12.22□□□□□ -0.45
USF1-202ENST00000368020 TMEM42Q69YG0 159 aa12.22□□□□□ -0.45
USF1-202ENST00000368020 PLXDC2Q6UX71 529 aa12.22□□□□□ -0.45
USF1-202ENST00000368020 DPPA2Q7Z7J5 298 aa12.22□□□□□ -0.45
USF1-202ENST00000368020 HOGA1Q86XE5 327 aa12.22□□□□□ -0.45
USF1-202ENST00000368020 OR5H2Q8NGV7 314 aa12.22□□□□□ -0.45
USF1-202ENST00000368020 MRPS24Q96EL2 167 aaKnown RBP12.22□□□□□ -0.45
USF1-202ENST00000368020 CHST6Q9GZX3 395 aa12.22□□□□□ -0.45
USF1-202ENST00000368020 VSIG4Q9Y279 399 aa12.22□□□□□ -0.45
USF1-202ENST00000368020 NOP16Q9Y3C1 178 aaKnown RBP12.22□□□□□ -0.45
USF1-202ENST00000368020 LINC00862A6NCI5 91 aa12.21□□□□□ -0.45
USF1-202ENST00000368020 RFPL4AA6NLU0 287 aa12.21□□□□□ -0.45
USF1-202ENST00000368020 FOXI3A8MTJ6 420 aaPredicted RBP12.21□□□□□ -0.45
USF1-202ENST00000368020 RFPL4AL1F8VTS6 287 aa12.21□□□□□ -0.45
USF1-202ENST00000368020 KLK10O43240 276 aa12.21□□□□□ -0.45
USF1-202ENST00000368020 DUS4LO95620 317 aaKnown RBP12.21□□□□□ -0.45
USF1-202ENST00000368020 CSTBP04080 98 aaKnown RBP12.21□□□□□ -0.45
USF1-202ENST00000368020 CSN2P05814 226 aa12.21□□□□□ -0.45
USF1-202ENST00000368020 SP1P08047 785 aa12.21□□□□□ -0.45
USF1-202ENST00000368020 RPA2P15927 270 aa12.21□□□□□ -0.45
USF1-202ENST00000368020 ZBTB25P24278 435 aa12.21□□□□□ -0.45
USF1-202ENST00000368020 S100A11P31949 105 aa12.21□□□□□ -0.45
USF1-202ENST00000368020 NTF4P34130 210 aa12.21□□□□□ -0.45
USF1-202ENST00000368020 RBP2P50120 134 aa12.21□□□□□ -0.45
USF1-202ENST00000368020 TMEM50BP56557 158 aa12.21□□□□□ -0.45
USF1-202ENST00000368020 IL13RA1P78552 427 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms