RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 MAIP1Q8WWC4 291 aa4.09□□□□□ -1.75
RNU4-39P-201ENST00000362455 STARD4Q96DR4 205 aa4.09□□□□□ -1.75
RNU4-39P-201ENST00000362455 WDR34Q96EX3 536 aa4.09□□□□□ -1.75
RNU4-39P-201ENST00000362455 JSRP1Q96MG2 331 aaPredicted RBP4.09□□□□□ -1.75
RNU4-39P-201ENST00000362455 RBM14Q96PK6 669 aaKnown RBP4.09□□□□□ -1.75
RNU4-39P-201ENST00000362455 SLC38A2Q96QD8 506 aa4.09□□□□□ -1.75
RNU4-39P-201ENST00000362455 RNF126Q9BV68 326 aa4.09□□□□□ -1.75
RNU4-39P-201ENST00000362455 ZNF717Q9BY31 904 aaPredicted RBP4.09□□□□□ -1.75
RNU4-39P-201ENST00000362455 ANGPTL4Q9BY76 406 aa4.09□□□□□ -1.75
RNU4-39P-201ENST00000362455 Q9H3A6 140 aa4.09□□□□□ -1.75
RNU4-39P-201ENST00000362455 FN3KRPQ9HA64 309 aa4.09□□□□□ -1.75
RNU4-39P-201ENST00000362455 LYRM4Q9HD34 91 aa4.09□□□□□ -1.75
RNU4-39P-201ENST00000362455 KLHL28Q9NXS3 571 aa4.09□□□□□ -1.75
RNU4-39P-201ENST00000362455 CLCF1Q9UBD9 225 aa4.09□□□□□ -1.75
RNU4-39P-201ENST00000362455 BOKQ9UMX3 212 aaPredicted RBP4.09□□□□□ -1.75
RNU4-39P-201ENST00000362455 MOKQ9UQ07 419 aa4.09□□□□□ -1.75
RNU4-39P-201ENST00000362455 C15orf41Q9Y2V0 281 aa4.09□□□□□ -1.75
RNU4-39P-201ENST00000362455 RTTNQ86VV8 2226 aa4.09□□□□□ -1.76
RNU4-39P-201ENST00000362455 PCP4L1A6NKN8 68 aa4.08□□□□□ -1.76
RNU4-39P-201ENST00000362455 TRIM64CA6NLI5 447 aa4.08□□□□□ -1.76
RNU4-39P-201ENST00000362455 TRDCB7Z8K6 153 aa4.08□□□□□ -1.76
RNU4-39P-201ENST00000362455 H0YC42 278 aa4.08□□□□□ -1.76
RNU4-39P-201ENST00000362455 NBR2O15453 112 aa4.08□□□□□ -1.76
RNU4-39P-201ENST00000362455 PIAS1O75925 651 aa4.08□□□□□ -1.76
RNU4-39P-201ENST00000362455 DIRAS1O95057 198 aa4.08□□□□□ -1.76
RNU4-39P-201ENST00000362455 HIST1H1TP22492 207 aaPredicted RBP4.08□□□□□ -1.76
RNU4-39P-201ENST00000362455 CRYGSP22914 178 aa4.08□□□□□ -1.76
RNU4-39P-201ENST00000362455 IVDP26440 423 aa4.08□□□□□ -1.76
RNU4-39P-201ENST00000362455 RPL13AP40429 203 aaKnown RBP4.08□□□□□ -1.76
RNU4-39P-201ENST00000362455 MAP3K8P41279 467 aa4.08□□□□□ -1.76
RNU4-39P-201ENST00000362455 OR3A4PP47883 348 aa4.08□□□□□ -1.76
RNU4-39P-201ENST00000362455 TAS2R39P59534 338 aa4.08□□□□□ -1.76
RNU4-39P-201ENST00000362455 KRTAP10-6P60371 365 aaPredicted RBP4.08□□□□□ -1.76
RNU4-39P-201ENST00000362455 DDX39BQ13838 428 aaKnown RBP4.08□□□□□ -1.76
RNU4-39P-201ENST00000362455 ZNF239Q16600 458 aaKnown RBP4.08□□□□□ -1.76
RNU4-39P-201ENST00000362455 LRRC36Q1X8D7 754 aa4.08□□□□□ -1.76
RNU4-39P-201ENST00000362455 TIGD3Q6B0B8 471 aa4.08□□□□□ -1.76
RNU4-39P-201ENST00000362455 C4orf22Q6V702 233 aa4.08□□□□□ -1.76
RNU4-39P-201ENST00000362455 DNM1P46Q6ZS02 220 aa4.08□□□□□ -1.76
RNU4-39P-201ENST00000362455 ZNF550Q7Z398 422 aa4.08□□□□□ -1.76
RNU4-39P-201ENST00000362455 NRMQ8IXM6 262 aa4.08□□□□□ -1.76
RNU4-39P-201ENST00000362455 PRR22Q8IZ63 422 aa4.08□□□□□ -1.76
RNU4-39P-201ENST00000362455 LIX1Q8N485 282 aa4.08□□□□□ -1.76
RNU4-39P-201ENST00000362455 TBC1D19Q8N5T2 526 aa4.08□□□□□ -1.76
RNU4-39P-201ENST00000362455 RNF10Q8N5U6 811 aaKnown RBP4.08□□□□□ -1.76
RNU4-39P-201ENST00000362455 ZNF615Q8N8J6 731 aa4.08□□□□□ -1.76
RNU4-39P-201ENST00000362455 BBOF1Q8ND07 529 aa4.08□□□□□ -1.76
RNU4-39P-201ENST00000362455 FAM83FQ8NEG4 500 aaPredicted RBP4.08□□□□□ -1.76
RNU4-39P-201ENST00000362455 OR56B4Q8NH76 319 aa4.08□□□□□ -1.76
RNU4-39P-201ENST00000362455 HGDQ93099 445 aa4.08□□□□□ -1.76
RNU4-39P-201ENST00000362455 FGGYQ96C11 551 aa4.08□□□□□ -1.76
RNU4-39P-201ENST00000362455 EFHD2Q96C19 240 aaPredicted RBP4.08□□□□□ -1.76
RNU4-39P-201ENST00000362455 RILPQ96NA2 401 aa4.08□□□□□ -1.76
RNU4-39P-201ENST00000362455 TBX15Q96SF7 602 aa4.08□□□□□ -1.76
RNU4-39P-201ENST00000362455 DOHHQ9BU89 302 aa4.08□□□□□ -1.76
RNU4-39P-201ENST00000362455 MS4A8Q9BY19 250 aa4.08□□□□□ -1.76
RNU4-39P-201ENST00000362455 PARD6BQ9BYG5 372 aa4.08□□□□□ -1.76
RNU4-39P-201ENST00000362455 SRXN1Q9BYN0 137 aa4.08□□□□□ -1.76
RNU4-39P-201ENST00000362455 OR51B5Q9H339 312 aa4.08□□□□□ -1.76
RNU4-39P-201ENST00000362455 ZNF702PQ9H963 129 aa4.08□□□□□ -1.76
RNU4-39P-201ENST00000362455 POLE4Q9NR33 117 aa4.08□□□□□ -1.76
RNU4-39P-201ENST00000362455 ONECUT1Q9UBC0 465 aa4.08□□□□□ -1.76
RNU4-39P-201ENST00000362455 PRPF19Q9UMS4 504 aaKnown RBP4.08□□□□□ -1.76
RNU4-39P-201ENST00000362455 GUCA1BQ9UMX6 200 aa4.08□□□□□ -1.76
RNU4-39P-201ENST00000362455 VSIG4Q9Y279 399 aa4.08□□□□□ -1.76
RNU4-39P-201ENST00000362455 ASB4Q9Y574 426 aa4.08□□□□□ -1.76
RNU4-39P-201ENST00000362455 ARID1AO14497 2285 aa4.07□□□□□ -1.76
RNU4-39P-201ENST00000362455 USF3Q68DE3 2245 aa4.07□□□□□ -1.76
RNU4-39P-201ENST00000362455 HEATR5BQ9P2D3 2071 aa4.07□□□□□ -1.76
RNU4-39P-201ENST00000362455 SCN3AQ9NY46 2000 aa4.07□□□□□ -1.76
RNU4-39P-201ENST00000362455 KIAA1549Q9HCM3 1950 aa4.07□□□□□ -1.76
RNU4-39P-201ENST00000362455 TENM1Q9UKZ4 2725 aa4.07□□□□□ -1.76
RNU4-39P-201ENST00000362455 IGHV1OR15-1A0A075B7D0 117 aa4.07□□□□□ -1.76
RNU4-39P-201ENST00000362455 A0A096LNT2 108 aa4.07□□□□□ -1.76
RNU4-39P-201ENST00000362455 A0A1B0GUS0 222 aa4.07□□□□□ -1.76
RNU4-39P-201ENST00000362455 NCF1BA6NI72 391 aaPredicted RBP4.07□□□□□ -1.76
RNU4-39P-201ENST00000362455 NCF1CA8MVU1 366 aaPredicted RBP4.07□□□□□ -1.76
RNU4-39P-201ENST00000362455 RGS16O15492 202 aaPredicted RBP4.07□□□□□ -1.76
RNU4-39P-201ENST00000362455 FCMRO60667 390 aa4.07□□□□□ -1.76
RNU4-39P-201ENST00000362455 ICOSLGO75144 302 aa4.07□□□□□ -1.76
RNU4-39P-201ENST00000362455 SRSF10O75494 262 aaKnown RBP4.07□□□□□ -1.76
RNU4-39P-201ENST00000362455 EEDO75530 441 aaKnown RBP4.07□□□□□ -1.76
RNU4-39P-201ENST00000362455 SERF1AO75920 110 aa4.07□□□□□ -1.76
RNU4-39P-201ENST00000362455 GPR75O95800 540 aa4.07□□□□□ -1.76
RNU4-39P-201ENST00000362455 AIFM1O95831 613 aa4.07□□□□□ -1.76
RNU4-39P-201ENST00000362455 LALBAP00709 142 aa4.07□□□□□ -1.76
RNU4-39P-201ENST00000362455 IGHV3-23P01764 117 aa4.07□□□□□ -1.76
RNU4-39P-201ENST00000362455 PGAM1P18669 254 aa4.07□□□□□ -1.76
RNU4-39P-201ENST00000362455 CPN2P22792 545 aa4.07□□□□□ -1.76
RNU4-39P-201ENST00000362455 UGT2B10P36537 528 aa4.07□□□□□ -1.76
RNU4-39P-201ENST00000362455 ANP32AP39687 249 aaKnown RBP4.07□□□□□ -1.76
RNU4-39P-201ENST00000362455 LHX2P50458 406 aa4.07□□□□□ -1.76
RNU4-39P-201ENST00000362455 P2RY4P51582 365 aa4.07□□□□□ -1.76
RNU4-39P-201ENST00000362455 HNRNPA3P51991 378 aaKnown RBP4.07□□□□□ -1.76
RNU4-39P-201ENST00000362455 SUCLG1P53597 346 aaKnown RBP4.07□□□□□ -1.76
RNU4-39P-201ENST00000362455 CLDN18P56856 261 aa4.07□□□□□ -1.76
RNU4-39P-201ENST00000362455 SARNPP82979 210 aaKnown RBP4.07□□□□□ -1.76
RNU4-39P-201ENST00000362455 CHRNB3Q05901 458 aa4.07□□□□□ -1.76
RNU4-39P-201ENST00000362455 SLAMF1Q13291 335 aa4.07□□□□□ -1.76
RNU4-39P-201ENST00000362455 KIAA0040Q15053 153 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms