RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 KIAA1456Q9P272 454 aa13.31□□□□□ -0.28
CHD4-201ENST00000357008 GPANK1O95872 356 aa13.31□□□□□ -0.28
CHD4-201ENST00000357008 RPS16P62249 146 aaKnown RBP13.31□□□□□ -0.28
CHD4-201ENST00000357008 ZNF793Q6ZN11 406 aa13.31□□□□□ -0.28
CHD4-201ENST00000357008 TMEM37Q8WXS4 190 aa13.31□□□□□ -0.28
CHD4-201ENST00000357008 GPR137Q96N19 417 aa13.31□□□□□ -0.28
CHD4-201ENST00000357008 IP6K3Q96PC2 410 aa13.31□□□□□ -0.28
CHD4-201ENST00000357008 COX7A2P2O60397 106 aa13.31□□□□□ -0.28
CHD4-201ENST00000357008 PTTG1IPP53801 180 aa13.31□□□□□ -0.28
CHD4-201ENST00000357008 PCBP3P57721 371 aaKnown RBP13.31□□□□□ -0.28
CHD4-201ENST00000357008 ANKRD33Q7Z3H0 272 aa13.31□□□□□ -0.28
CHD4-201ENST00000357008 FAM24BQ8N5W8 94 aa13.31□□□□□ -0.28
CHD4-201ENST00000357008 NHLRC2Q8NBF2 726 aa13.31□□□□□ -0.28
CHD4-201ENST00000357008 APOBEC3DQ96AK3 386 aaPredicted RBP13.31□□□□□ -0.28
CHD4-201ENST00000357008 WDR34Q96EX3 536 aa13.31□□□□□ -0.28
CHD4-201ENST00000357008 DEFB127Q9H1M4 99 aa13.31□□□□□ -0.28
CHD4-201ENST00000357008 ZNF835Q9Y2P0 537 aa13.31□□□□□ -0.28
CHD4-201ENST00000357008 PPIL1Q9Y3C6 166 aa13.31□□□□□ -0.28
CHD4-201ENST00000357008 NUP205Q92621 2012 aa13.31□□□□□ -0.28
CHD4-201ENST00000357008 CYC1P08574 325 aa13.31□□□□□ -0.28
CHD4-201ENST00000357008 GFERP55789 205 aa13.31□□□□□ -0.28
CHD4-201ENST00000357008 ZNF718Q3SXZ3 478 aa13.31□□□□□ -0.28
CHD4-201ENST00000357008 TOMM20LQ6UXN7 152 aa13.31□□□□□ -0.28
CHD4-201ENST00000357008 DEFB108BQ8NET1 73 aa13.31□□□□□ -0.28
CHD4-201ENST00000357008 RAB40CQ96S21 281 aa13.31□□□□□ -0.28
CHD4-201ENST00000357008 POMT1Q9Y6A1 747 aa13.31□□□□□ -0.28
CHD4-201ENST00000357008 C1QAP02745 245 aa13.31□□□□□ -0.28
CHD4-201ENST00000357008 FAM157BP0CG42 384 aa13.31□□□□□ -0.28
CHD4-201ENST00000357008 ZNF816Q0VGE8 651 aaPredicted RBP13.31□□□□□ -0.28
CHD4-201ENST00000357008 KISS1Q15726 138 aa13.31□□□□□ -0.28
CHD4-201ENST00000357008 DMRTC1Q5HYR2 192 aa13.31□□□□□ -0.28
CHD4-201ENST00000357008 NHLRC1Q6VVB1 395 aa13.31□□□□□ -0.28
CHD4-201ENST00000357008 OR1F12Q8NHA8 337 aa13.31□□□□□ -0.28
CHD4-201ENST00000357008 AKR7LQ8NHP1 331 aa13.31□□□□□ -0.28
CHD4-201ENST00000357008 PIK3IP1Q96FE7 263 aa13.31□□□□□ -0.28
CHD4-201ENST00000357008 TIMD4Q96H15 378 aa13.31□□□□□ -0.28
CHD4-201ENST00000357008 UQCC1Q9NVA1 299 aa13.31□□□□□ -0.28
CHD4-201ENST00000357008 EPPINO95925 133 aa13.3□□□□□ -0.28
CHD4-201ENST00000357008 FUT7Q11130 342 aa13.3□□□□□ -0.28
CHD4-201ENST00000357008 IFI44Q8TCB0 444 aa13.3□□□□□ -0.28
CHD4-201ENST00000357008 ZNF426Q9BUY5 554 aa13.3□□□□□ -0.28
CHD4-201ENST00000357008 A0A1W2PPC4 97 aa13.3□□□□□ -0.28
CHD4-201ENST00000357008 ONECUT2O95948 504 aa13.3□□□□□ -0.28
CHD4-201ENST00000357008 TMEM241Q24JQ0 296 aa13.3□□□□□ -0.28
CHD4-201ENST00000357008 SMIM21Q3B7S5 101 aa13.3□□□□□ -0.28
CHD4-201ENST00000357008 C17orf47Q8NEP4 570 aa13.3□□□□□ -0.28
CHD4-201ENST00000357008 BARX1Q9HBU1 254 aaPredicted RBP13.3□□□□□ -0.28
CHD4-201ENST00000357008 LYRM2Q9NU23 88 aaPredicted RBP13.3□□□□□ -0.28
CHD4-201ENST00000357008 PKD1L3Q7Z443 1732 aa13.3□□□□□ -0.28
CHD4-201ENST00000357008 PNPP00491 289 aa13.3□□□□□ -0.28
CHD4-201ENST00000357008 GGNBP1Q5YKI7 109 aa13.3□□□□□ -0.28
CHD4-201ENST00000357008 OR1N1Q8NGS0 311 aa13.3□□□□□ -0.28
CHD4-201ENST00000357008 CLDN23Q96B33 292 aa13.3□□□□□ -0.28
CHD4-201ENST00000357008 CTDSPLO15194 276 aa13.3□□□□□ -0.28
CHD4-201ENST00000357008 PTCRAQ6ISU1 281 aaPredicted RBP13.3□□□□□ -0.28
CHD4-201ENST00000357008 UBE2ZQ9H832 354 aaPredicted RBP13.3□□□□□ -0.28
CHD4-201ENST00000357008 DNAJB12Q9NXW2 375 aaKnown RBP13.3□□□□□ -0.28
CHD4-201ENST00000357008 GSTZ1O43708 216 aaPredicted RBP13.3□□□□□ -0.28
CHD4-201ENST00000357008 HPP00738 406 aa13.3□□□□□ -0.28
CHD4-201ENST00000357008 CEACAM16Q2WEN9 425 aa13.3□□□□□ -0.28
CHD4-201ENST00000357008 NXF2Q9GZY0 626 aaKnown RBP13.3□□□□□ -0.28
CHD4-201ENST00000357008 ZNF391Q9UJN7 358 aa13.3□□□□□ -0.28
CHD4-201ENST00000357008 LSMEM1Q8N8F7 131 aa13.29□□□□□ -0.28
CHD4-201ENST00000357008 OR2V1Q8NHB1 315 aa13.29□□□□□ -0.28
CHD4-201ENST00000357008 SPACA9Q96E40 222 aaPredicted RBP13.29□□□□□ -0.28
CHD4-201ENST00000357008 LY86O95711 162 aa13.29□□□□□ -0.28
CHD4-201ENST00000357008 GALR1P47211 349 aa13.29□□□□□ -0.28
CHD4-201ENST00000357008 MEOX2P50222 304 aa13.29□□□□□ -0.28
CHD4-201ENST00000357008 PPIAP62937 165 aaKnown RBP13.29□□□□□ -0.28
CHD4-201ENST00000357008 IL13RA2Q14627 380 aa13.29□□□□□ -0.28
CHD4-201ENST00000357008 FOXB1Q99853 325 aa13.29□□□□□ -0.28
CHD4-201ENST00000357008 MYOGP15173 224 aa13.29□□□□□ -0.28
CHD4-201ENST00000357008 PTGFRP43088 359 aa13.29□□□□□ -0.28
CHD4-201ENST00000357008 ZC3HAV1LQ96H79 300 aaKnown RBP13.29□□□□□ -0.28
CHD4-201ENST00000357008 PROCRQ9UNN8 238 aa13.29□□□□□ -0.28
CHD4-201ENST00000357008 PHIPQ8WWQ0 1821 aa13.29□□□□□ -0.28
CHD4-201ENST00000357008 SEMG1P04279 462 aa13.29□□□□□ -0.28
CHD4-201ENST00000357008 HIST1H3AP68431 136 aa13.29□□□□□ -0.28
CHD4-201ENST00000357008 SARAFQ96BY9 339 aa13.29□□□□□ -0.28
CHD4-201ENST00000357008 LILRA5A6NI73 299 aa13.29□□□□□ -0.28
CHD4-201ENST00000357008 G0S2P27469 103 aa13.29□□□□□ -0.28
CHD4-201ENST00000357008 DSCR4P56555 118 aaPredicted RBP13.29□□□□□ -0.28
CHD4-201ENST00000357008 FAHD2BQ6P2I3 314 aaPredicted RBP13.29□□□□□ -0.28
CHD4-201ENST00000357008 OR5C1Q8NGR4 320 aa13.29□□□□□ -0.28
CHD4-201ENST00000357008 FAHD2AQ96GK7 314 aa13.29□□□□□ -0.28
CHD4-201ENST00000357008 FAM210BQ96KR6 192 aa13.29□□□□□ -0.28
CHD4-201ENST00000357008 V9GYH0 126 aa13.29□□□□□ -0.28
CHD4-201ENST00000357008 PIAS2O75928 621 aa13.28□□□□□ -0.28
CHD4-201ENST00000357008 GPM6AP51674 278 aa13.28□□□□□ -0.28
CHD4-201ENST00000357008 LIMK1P53667 647 aa13.28□□□□□ -0.28
CHD4-201ENST00000357008 C21orf58P58505 322 aa13.28□□□□□ -0.28
CHD4-201ENST00000357008 OR4C3Q8NH37 302 aa13.28□□□□□ -0.28
CHD4-201ENST00000357008 POM121L2Q96KW2 1035 aa13.28□□□□□ -0.28
CHD4-201ENST00000357008 NOL4LQ96MY1 436 aaPredicted RBP13.28□□□□□ -0.28
CHD4-201ENST00000357008 TMEM30CPA0ZSE6 113 aa13.28□□□□□ -0.28
CHD4-201ENST00000357008 LEUTXA8MZ59 168 aa13.28□□□□□ -0.28
CHD4-201ENST00000357008 CD200P41217 278 aa13.28□□□□□ -0.28
CHD4-201ENST00000357008 Q8IYB0 196 aa13.28□□□□□ -0.28
CHD4-201ENST00000357008 OR4C5Q8NGB2 326 aa13.28□□□□□ -0.28
CHD4-201ENST00000357008 PMCHP20382 165 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms