RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 PMF1-BGLAPU3KQ54 211 aa23.05■■□□□ 1.28
SSBP4-202ENST00000348495 UTP20O75691 2785 aaKnown RBP23.04■■□□□ 1.28
SSBP4-202ENST00000348495 PLSCR5A0PG75 271 aa23.04■■□□□ 1.28
SSBP4-202ENST00000348495 HS3ST1O14792 307 aa23.04■■□□□ 1.28
SSBP4-202ENST00000348495 MAGEB3O15480 346 aa23.04■■□□□ 1.28
SSBP4-202ENST00000348495 THBS2P35442 1172 aa23.04■■□□□ 1.28
SSBP4-202ENST00000348495 KISS1Q15726 138 aa23.04■■□□□ 1.28
SSBP4-202ENST00000348495 C1orf100Q5SVJ3 147 aa23.04■■□□□ 1.28
SSBP4-202ENST00000348495 FAM166AQ6J272 317 aa23.04■■□□□ 1.28
SSBP4-202ENST00000348495 CROCCP3Q8IVE0 287 aa23.04■■□□□ 1.28
SSBP4-202ENST00000348495 FBXW5Q969U6 566 aa23.04■■□□□ 1.28
SSBP4-202ENST00000348495 FOXRED1Q96CU9 486 aaPredicted RBP23.04■■□□□ 1.28
SSBP4-202ENST00000348495 HIST1H2AAQ96QV6 131 aa23.04■■□□□ 1.28
SSBP4-202ENST00000348495 NKX3-1Q99801 234 aaPredicted RBP23.04■■□□□ 1.28
SSBP4-202ENST00000348495 NEK6Q9HC98 313 aa23.04■■□□□ 1.28
SSBP4-202ENST00000348495 GCN1Q92616 2671 aaKnown RBP23.04■■□□□ 1.28
SSBP4-202ENST00000348495 FAM230AA0A1W2PPH8 454 aa23.03■■□□□ 1.28
SSBP4-202ENST00000348495 OR5B21A6NL26 309 aa23.03■■□□□ 1.28
SSBP4-202ENST00000348495 B9A039 149 aa23.03■■□□□ 1.28
SSBP4-202ENST00000348495 AIPO00170 330 aa23.03■■□□□ 1.28
SSBP4-202ENST00000348495 ZNF93P35789 620 aaPredicted RBP23.03■■□□□ 1.28
SSBP4-202ENST00000348495 ALDH3B1P43353 468 aa23.03■■□□□ 1.28
SSBP4-202ENST00000348495 OR8G1Q15617 311 aa23.03■■□□□ 1.28
SSBP4-202ENST00000348495 NKPD1Q17RQ9 610 aa23.03■■□□□ 1.28
SSBP4-202ENST00000348495 SWI5Q1ZZU3 235 aa23.03■■□□□ 1.28
SSBP4-202ENST00000348495 LHFPL2Q6ZUX7 228 aa23.03■■□□□ 1.28
SSBP4-202ENST00000348495 OR10AD1Q8NGE0 317 aa23.03■■□□□ 1.28
SSBP4-202ENST00000348495 BORCS8Q96FH0 119 aa23.03■■□□□ 1.28
SSBP4-202ENST00000348495 UQCC2Q9BRT2 126 aa23.03■■□□□ 1.28
SSBP4-202ENST00000348495 NOP16Q9Y3C1 178 aaKnown RBP23.03■■□□□ 1.28
SSBP4-202ENST00000348495 RBP2P50120 134 aa23.02■■□□□ 1.28
SSBP4-202ENST00000348495 FAM76BQ5HYJ3 339 aa23.02■■□□□ 1.28
SSBP4-202ENST00000348495 MUC15Q8N387 334 aa23.02■■□□□ 1.28
SSBP4-202ENST00000348495 JAGN1Q8N5M9 183 aa23.02■■□□□ 1.28
SSBP4-202ENST00000348495 OR8S1Q8NH09 359 aa23.02■■□□□ 1.28
SSBP4-202ENST00000348495 RNF170Q96K19 258 aa23.02■■□□□ 1.28
SSBP4-202ENST00000348495 PSMG3-AS1Q96PY0 264 aa23.02■■□□□ 1.28
SSBP4-202ENST00000348495 ZNF732B4DXR9 585 aa23.02■■□□□ 1.28
SSBP4-202ENST00000348495 SLC17A2O00624 439 aa23.02■■□□□ 1.28
SSBP4-202ENST00000348495 CTAG2O75638 210 aa23.02■■□□□ 1.28
SSBP4-202ENST00000348495 SLC2A2P11168 524 aaPredicted RBP23.02■■□□□ 1.28
SSBP4-202ENST00000348495 COX6B1P14854 86 aa23.02■■□□□ 1.28
SSBP4-202ENST00000348495 SOX6P35712 828 aa23.02■■□□□ 1.28
SSBP4-202ENST00000348495 GPM6AP51674 278 aa23.02■■□□□ 1.28
SSBP4-202ENST00000348495 MTCP1P56278 107 aa23.02■■□□□ 1.28
SSBP4-202ENST00000348495 SPERTQ8NA61 448 aa23.02■■□□□ 1.28
SSBP4-202ENST00000348495 MICU1Q9BPX6 476 aa23.02■■□□□ 1.28
SSBP4-202ENST00000348495 RTL8AQ9BWD3 113 aa23.02■■□□□ 1.28
SSBP4-202ENST00000348495 CNTD2Q9H8S5 307 aa23.02■■□□□ 1.28
SSBP4-202ENST00000348495 DAPK2Q9UIK4 370 aa23.02■■□□□ 1.28
SSBP4-202ENST00000348495 ZNF81P51508 661 aa23.01■■□□□ 1.27
SSBP4-202ENST00000348495 GNG3P63215 75 aa23.01■■□□□ 1.27
SSBP4-202ENST00000348495 DGUOKQ16854 277 aa23.01■■□□□ 1.27
SSBP4-202ENST00000348495 WDR86Q86TI4 376 aa23.01■■□□□ 1.27
SSBP4-202ENST00000348495 FBXL14Q8N1E6 418 aa23.01■■□□□ 1.27
SSBP4-202ENST00000348495 SLC25A28Q96A46 364 aa23.01■■□□□ 1.27
SSBP4-202ENST00000348495 TMEM127O75204 238 aa23■■□□□ 1.27
SSBP4-202ENST00000348495 ADH4P08319 380 aa23■■□□□ 1.27
SSBP4-202ENST00000348495 NAT2P11245 290 aa23■■□□□ 1.27
SSBP4-202ENST00000348495 ATP1B3P54709 279 aa23■■□□□ 1.27
SSBP4-202ENST00000348495 ZP1P60852 638 aa23■■□□□ 1.27
SSBP4-202ENST00000348495 MAB21L1Q13394 359 aa23■■□□□ 1.27
SSBP4-202ENST00000348495 RIN1Q13671 783 aa23■■□□□ 1.27
SSBP4-202ENST00000348495 HES5Q5TA89 166 aa23■■□□□ 1.27
SSBP4-202ENST00000348495 OR2Z1Q8NG97 314 aa23■■□□□ 1.27
SSBP4-202ENST00000348495 OR4D6Q8NGJ1 314 aa23■■□□□ 1.27
SSBP4-202ENST00000348495 OR6M1Q8NGM8 313 aa23■■□□□ 1.27
SSBP4-202ENST00000348495 CPNE2Q96FN4 548 aaPredicted RBP23■■□□□ 1.27
SSBP4-202ENST00000348495 SORCS2Q96PQ0 1159 aa23■■□□□ 1.27
SSBP4-202ENST00000348495 NXF2Q9GZY0 626 aaKnown RBP23■■□□□ 1.27
SSBP4-202ENST00000348495 RAI1Q7Z5J4 1906 aaPredicted RBP23■■□□□ 1.27
SSBP4-202ENST00000348495 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP22.99■■□□□ 1.27
SSBP4-202ENST00000348495 F5H5P2 479 aa22.99■■□□□ 1.27
SSBP4-202ENST00000348495 M0R233 179 aa22.99■■□□□ 1.27
SSBP4-202ENST00000348495 IDNKQ5T6J7 187 aa22.99■■□□□ 1.27
SSBP4-202ENST00000348495 CXXC4Q9H2H0 198 aa22.99■■□□□ 1.27
SSBP4-202ENST00000348495 PLGRKTQ9HBL7 147 aa22.99■■□□□ 1.27
SSBP4-202ENST00000348495 PTTG2Q9NZH5 202 aa22.99■■□□□ 1.27
SSBP4-202ENST00000348495 STEAP1Q9UHE8 339 aa22.99■■□□□ 1.27
SSBP4-202ENST00000348495 ZDHHC8Q9ULC8 765 aa22.99■■□□□ 1.27
SSBP4-202ENST00000348495 LOC100289279A0A1B0GTE1 492 aa22.99■■□□□ 1.27
SSBP4-202ENST00000348495 IGHV1-46P01743 117 aa22.99■■□□□ 1.27
SSBP4-202ENST00000348495 DANCRP0C864 163 aa22.99■■□□□ 1.27
SSBP4-202ENST00000348495 HTR2CP28335 458 aa22.99■■□□□ 1.27
SSBP4-202ENST00000348495 ZNF611Q8N823 705 aa22.99■■□□□ 1.27
SSBP4-202ENST00000348495 RFT1Q96AA3 541 aa22.99■■□□□ 1.27
SSBP4-202ENST00000348495 ELMOD3Q96FG2 381 aa22.99■■□□□ 1.27
SSBP4-202ENST00000348495 OR51I2Q9H344 312 aa22.99■■□□□ 1.27
SSBP4-202ENST00000348495 C17orf100A8MU93 164 aa22.98■■□□□ 1.27
SSBP4-202ENST00000348495 SPRY3O43610 288 aa22.98■■□□□ 1.27
SSBP4-202ENST00000348495 PTBP3O95758 552 aaKnown RBP22.98■■□□□ 1.27
SSBP4-202ENST00000348495 CD200P41217 278 aa22.98■■□□□ 1.27
SSBP4-202ENST00000348495 OR3A4PP47883 348 aa22.98■■□□□ 1.27
SSBP4-202ENST00000348495 CLDN12P56749 244 aa22.98■■□□□ 1.27
SSBP4-202ENST00000348495 TLE4Q04727 773 aa22.98■■□□□ 1.27
SSBP4-202ENST00000348495 DTX2Q86UW9 622 aa22.98■■□□□ 1.27
SSBP4-202ENST00000348495 CALHM1Q8IU99 346 aa22.98■■□□□ 1.27
SSBP4-202ENST00000348495 KCTD12Q96CX2 325 aaKnown RBP22.98■■□□□ 1.27
SSBP4-202ENST00000348495 GPER1Q99527 375 aa22.98■■□□□ 1.27
SSBP4-202ENST00000348495 FAIMQ9NVQ4 179 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms