RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 MPZP25189 248 aa17.44■□□□□ 0.38
CRLF3-201ENST00000324238 TAS2R31P59538 309 aa17.44■□□□□ 0.38
CRLF3-201ENST00000324238 PJVKQ0ZLH3 352 aa17.44■□□□□ 0.38
CRLF3-201ENST00000324238 CHRFAM7AQ494W8 412 aa17.44■□□□□ 0.38
CRLF3-201ENST00000324238 NFAM1Q8NET5 270 aaPredicted RBP17.44■□□□□ 0.38
CRLF3-201ENST00000324238 TOMM40LQ969M1 308 aa17.44■□□□□ 0.38
CRLF3-201ENST00000324238 C20orf24Q9BUV8 137 aa17.44■□□□□ 0.38
CRLF3-201ENST00000324238 TAF9BQ9HBM6 251 aa17.44■□□□□ 0.38
CRLF3-201ENST00000324238 ZNF726A6NNF4 738 aa17.44■□□□□ 0.38
CRLF3-201ENST00000324238 DAOP14920 347 aa17.44■□□□□ 0.38
CRLF3-201ENST00000324238 ASCL1P50553 236 aa17.44■□□□□ 0.38
CRLF3-201ENST00000324238 NRIP2Q9BQI9 281 aa17.44■□□□□ 0.38
CRLF3-201ENST00000324238 SLC5A7Q9GZV3 580 aa17.44■□□□□ 0.38
CRLF3-201ENST00000324238 ASPMQ8IZT6 3477 aa17.44■□□□□ 0.38
CRLF3-201ENST00000324238 SFTA3P0C7M3 94 aa17.43■□□□□ 0.38
CRLF3-201ENST00000324238 PTGFRP43088 359 aa17.43■□□□□ 0.38
CRLF3-201ENST00000324238 FHITP49789 147 aa17.43■□□□□ 0.38
CRLF3-201ENST00000324238 AFF3P51826 1226 aaKnown RBP17.43■□□□□ 0.38
CRLF3-201ENST00000324238 OR2AE1Q8NHA4 323 aa17.43■□□□□ 0.38
CRLF3-201ENST00000324238 ZNF837Q96EG3 531 aaPredicted RBP17.43■□□□□ 0.38
CRLF3-201ENST00000324238 REEP6Q96HR9 211 aa17.43■□□□□ 0.38
CRLF3-201ENST00000324238 CRB3Q9BUF7 120 aa17.43■□□□□ 0.38
CRLF3-201ENST00000324238 PHF7Q9BWX1 381 aaPredicted RBP17.43■□□□□ 0.38
CRLF3-201ENST00000324238 NDRG3Q9UGV2 375 aa17.43■□□□□ 0.38
CRLF3-201ENST00000324238 TRBV6-7A0A0A0MS04 114 aa17.43■□□□□ 0.38
CRLF3-201ENST00000324238 MEX3AA1L020 520 aaKnown RBP17.43■□□□□ 0.38
CRLF3-201ENST00000324238 GSTP1P09211 210 aaKnown RBP17.43■□□□□ 0.38
CRLF3-201ENST00000324238 OR8U9P0C7N5 309 aa17.43■□□□□ 0.38
CRLF3-201ENST00000324238 RAB13P51153 203 aa17.43■□□□□ 0.38
CRLF3-201ENST00000324238 CYCSP99999 105 aaKnown RBP17.43■□□□□ 0.38
CRLF3-201ENST00000324238 CRIP3Q6Q6R5 217 aa17.43■□□□□ 0.38
CRLF3-201ENST00000324238 OR56B1Q8NGI3 324 aa17.43■□□□□ 0.38
CRLF3-201ENST00000324238 OR8U1Q8NH10 309 aa17.43■□□□□ 0.38
CRLF3-201ENST00000324238 AKR1E2Q96JD6 320 aa17.43■□□□□ 0.38
CRLF3-201ENST00000324238 ZNF2Q9BSG1 426 aaPredicted RBP17.43■□□□□ 0.38
CRLF3-201ENST00000324238 MMP26Q9NRE1 261 aa17.43■□□□□ 0.38
CRLF3-201ENST00000324238 FBXO9Q9UK97 447 aaPredicted RBP17.43■□□□□ 0.38
CRLF3-201ENST00000324238 CSTBP04080 98 aaKnown RBP17.43■□□□□ 0.38
CRLF3-201ENST00000324238 RPS2P15880 293 aaKnown RBP17.43■□□□□ 0.38
CRLF3-201ENST00000324238 RAB11FIP2Q7L804 512 aa17.43■□□□□ 0.38
CRLF3-201ENST00000324238 URM1Q9BTM9 101 aaKnown RBP17.43■□□□□ 0.38
CRLF3-201ENST00000324238 ZNF160Q9HCG1 818 aa17.43■□□□□ 0.38
CRLF3-201ENST00000324238 PCDHGA1Q9Y5H4 931 aa17.43■□□□□ 0.38
CRLF3-201ENST00000324238 SPRY1O43609 319 aaPredicted RBP17.42■□□□□ 0.38
CRLF3-201ENST00000324238 VAX1Q5SQQ9 334 aa17.42■□□□□ 0.38
CRLF3-201ENST00000324238 ARRDC1Q8N5I2 433 aa17.42■□□□□ 0.38
CRLF3-201ENST00000324238 POC1AQ8NBT0 407 aa17.42■□□□□ 0.38
CRLF3-201ENST00000324238 PLPP5Q8NEB5 264 aa17.42■□□□□ 0.38
CRLF3-201ENST00000324238 OR5T2Q8NGG2 359 aa17.42■□□□□ 0.38
CRLF3-201ENST00000324238 MRPL24Q96A35 216 aaKnown RBP17.42■□□□□ 0.38
CRLF3-201ENST00000324238 C2orf50Q96LR7 162 aa17.42■□□□□ 0.38
CRLF3-201ENST00000324238 UCN2Q96RP3 112 aa17.42■□□□□ 0.38
CRLF3-201ENST00000324238 WDR77Q9BQA1 342 aaPredicted RBP17.42■□□□□ 0.38
CRLF3-201ENST00000324238 RBM24Q9BX46 236 aaKnown RBP17.42■□□□□ 0.38
CRLF3-201ENST00000324238 PECRQ9BY49 303 aa17.42■□□□□ 0.38
CRLF3-201ENST00000324238 RAB18Q9NP72 206 aa17.42■□□□□ 0.38
CRLF3-201ENST00000324238 OSGIN2Q9Y236 505 aa17.42■□□□□ 0.38
CRLF3-201ENST00000324238 GPR179Q6PRD1 2367 aa17.42■□□□□ 0.38
CRLF3-201ENST00000324238 RNASEK-C17orf49H0YIS7 233 aa17.42■□□□□ 0.38
CRLF3-201ENST00000324238 XRCC2O43543 280 aa17.42■□□□□ 0.38
CRLF3-201ENST00000324238 C1QL1O75973 258 aa17.42■□□□□ 0.38
CRLF3-201ENST00000324238 DIRAS3O95661 229 aa17.42■□□□□ 0.38
CRLF3-201ENST00000324238 PATE4P0C8F1 98 aa17.42■□□□□ 0.38
CRLF3-201ENST00000324238 NOVA1P51513 510 aaKnown RBP17.42■□□□□ 0.38
CRLF3-201ENST00000324238 FXYD4P59646 89 aa17.42■□□□□ 0.38
CRLF3-201ENST00000324238 C5orf46Q6UWT4 87 aa17.42■□□□□ 0.38
CRLF3-201ENST00000324238 SEMA6DQ8NFY4 1073 aa17.42■□□□□ 0.38
CRLF3-201ENST00000324238 OR14K1Q8NGZ2 314 aa17.42■□□□□ 0.38
CRLF3-201ENST00000324238 SECTM1Q8WVN6 248 aa17.42■□□□□ 0.38
CRLF3-201ENST00000324238 LIME1Q9H400 295 aa17.42■□□□□ 0.38
CRLF3-201ENST00000324238 LINC01387J3KSC0 135 aa17.41■□□□□ 0.38
CRLF3-201ENST00000324238 ZNF708P17019 499 aa17.41■□□□□ 0.38
CRLF3-201ENST00000324238 FPR2P25090 351 aa17.41■□□□□ 0.38
CRLF3-201ENST00000324238 PTGDSP41222 190 aa17.41■□□□□ 0.38
CRLF3-201ENST00000324238 PPT1P50897 306 aa17.41■□□□□ 0.38
CRLF3-201ENST00000324238 CCL7P80098 99 aa17.41■□□□□ 0.38
CRLF3-201ENST00000324238 TAF9Q16594 264 aa17.41■□□□□ 0.38
CRLF3-201ENST00000324238 ZNF528Q3MIS6 628 aa17.41■□□□□ 0.38
CRLF3-201ENST00000324238 ZNF385AQ96PM9 386 aaKnown RBP17.41■□□□□ 0.38
CRLF3-201ENST00000324238 FAAP24Q9BTP7 215 aa17.41■□□□□ 0.38
CRLF3-201ENST00000324238 GPR173Q9NS66 373 aa17.41■□□□□ 0.38
CRLF3-201ENST00000324238 RCC2Q9P258 522 aaKnown RBP17.41■□□□□ 0.38
CRLF3-201ENST00000324238 PIGLQ9Y2B2 252 aa17.41■□□□□ 0.38
CRLF3-201ENST00000324238 GLAP06280 429 aa17.41■□□□□ 0.38
CRLF3-201ENST00000324238 HKR1P10072 659 aa17.41■□□□□ 0.38
CRLF3-201ENST00000324238 C5orf24Q7Z6I8 188 aa17.41■□□□□ 0.38
CRLF3-201ENST00000324238 ISOC2Q96AB3 205 aa17.41■□□□□ 0.38
CRLF3-201ENST00000324238 GNRHR2Q96P88 292 aa17.41■□□□□ 0.38
CRLF3-201ENST00000324238 RFNGQ9Y644 331 aa17.41■□□□□ 0.38
CRLF3-201ENST00000324238 A0A1W2PQM1 296 aa17.4■□□□□ 0.38
CRLF3-201ENST00000324238 CCDC85CA6NKD9 419 aa17.4■□□□□ 0.38
CRLF3-201ENST00000324238 NME2P1O60361 137 aa17.4■□□□□ 0.38
CRLF3-201ENST00000324238 SNAPINO95295 136 aa17.4■□□□□ 0.38
CRLF3-201ENST00000324238 TBPP20226 339 aa17.4■□□□□ 0.38
CRLF3-201ENST00000324238 SLC25A47Q6Q0C1 308 aa17.4■□□□□ 0.38
CRLF3-201ENST00000324238 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.4■□□□□ 0.38
CRLF3-201ENST00000324238 ERGIC1Q969X5 290 aa17.4■□□□□ 0.38
CRLF3-201ENST00000324238 S100A13Q99584 98 aa17.4■□□□□ 0.38
CRLF3-201ENST00000324238 OCSTAMPQ9BR26 566 aa17.4■□□□□ 0.38
CRLF3-201ENST00000324238 FBXL17Q9UF56 701 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms