RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 SERTAD2Q14140 314 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 SLC10A1Q14973 349 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 SPATA46Q5T0L3 261 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 C1orf94Q6P1W5 598 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 STAC2Q6ZMT1 411 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 PRSS41Q7RTY9 318 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 VRK2Q86Y07 508 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 KRTAP7-1Q8IUC3 87 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 RBM45Q8IUH3 476 aaKnown RBP3.17□□□□□ -1.9
SMCO3-201ENST00000316048 ENTHD1Q8IYW4 607 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 STX19Q8N4C7 294 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 BPIFB2Q8N4F0 458 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 OR5T3Q8NGG3 340 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 OR13F1Q8NGS4 319 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 FAM81AQ8TBF8 368 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 SLC7A13Q8TCU3 470 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 GNPDA2Q8TDQ7 276 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 RAB2BQ8WUD1 216 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 PIGCQ92535 297 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 CDS1Q92903 461 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 ANKRD9Q96BM1 317 aaPredicted RBP3.17□□□□□ -1.9
SMCO3-201ENST00000316048 C12orf43Q96C57 262 aaKnown RBP3.17□□□□□ -1.9
SMCO3-201ENST00000316048 ISOC1Q96CN7 298 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 WBP1Q96G27 269 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 MCHR1Q99705 422 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 ARHGDIGQ99819 225 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 VGLL1Q99990 258 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 PELOQ9BRX2 385 aaKnown RBP3.17□□□□□ -1.9
SMCO3-201ENST00000316048 COPS4Q9BT78 406 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 POLR2J2Q9GZM3 115 aaKnown RBP3.17□□□□□ -1.9
SMCO3-201ENST00000316048 GNB4Q9HAV0 340 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 RPRD1BQ9NQG5 326 aaKnown RBP3.17□□□□□ -1.9
SMCO3-201ENST00000316048 MRPL39Q9NYK5 338 aaKnown RBP3.17□□□□□ -1.9
SMCO3-201ENST00000316048 MAT2BQ9NZL9 334 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 F5P12259 2224 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 IGHV1OR21-1A0A087WYE8 117 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 NDUFAF8A1L188 74 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 EFCAB10A6NFE3 127 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 PRR23D1E9PI22 279 aaPredicted RBP3.17□□□□□ -1.9
SMCO3-201ENST00000316048 H7C423 109 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 L7N2F9 121 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 ZNF208O43345 1280 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 HCRTR1O43613 425 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 TPST2O60704 377 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 WBP4O75554 376 aaKnown RBP3.17□□□□□ -1.9
SMCO3-201ENST00000316048 OR2B3O76000 313 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 OR5F1O95221 314 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 IFNA16P05015 189 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 DCNP07585 359 aaKnown RBP3.17□□□□□ -1.9
SMCO3-201ENST00000316048 GUSBP08236 651 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 PRR23D2P0DMB1 279 aaPredicted RBP3.17□□□□□ -1.9
SMCO3-201ENST00000316048 BCKDHBP21953 392 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 PAX8Q06710 450 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 FUT5Q11128 374 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 CRMP1Q14194 572 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 DEFB110Q30KQ9 67 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 DCST2Q5T1A1 773 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 SYT6Q5T7P8 510 aaPredicted RBP3.17□□□□□ -1.9
SMCO3-201ENST00000316048 FHL5Q5TD97 284 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 MEDAGQ5VYS4 303 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 XAF1Q6GPH4 301 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 LAIR2Q6ISS4 152 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 PAQR6Q6TCH4 344 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 Q6ZPB1 254 aaPredicted RBP3.17□□□□□ -1.9
SMCO3-201ENST00000316048 DEFB123Q8N688 67 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 STXBP6Q8NFX7 210 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 OR4K5Q8NGD3 323 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 OR4D11Q8NGI4 311 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 OR51Q1Q8NH59 317 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 PIGXQ8TBF5 258 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 TRMT10AQ8TBZ6 339 aaKnown RBP3.17□□□□□ -1.9
SMCO3-201ENST00000316048 EMG1Q92979 244 aaKnown RBP3.17□□□□□ -1.9
SMCO3-201ENST00000316048 SDSLQ96GA7 329 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 SH3YL1Q96HL8 342 aaPredicted RBP3.17□□□□□ -1.9
SMCO3-201ENST00000316048 LINC00479Q96M42 142 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 ZNF285Q96NJ3 590 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 DOK1Q99704 481 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 PRRG3Q9BZD7 231 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 ANKRA2Q9H9E1 313 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 APMAPQ9HDC9 416 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 DHRS4-AS1Q9P1J3 65 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 ZNF443Q9Y2A4 671 aaPredicted RBP3.17□□□□□ -1.9
SMCO3-201ENST00000316048 RPL36Q9Y3U8 105 aaKnown RBP3.17□□□□□ -1.9
SMCO3-201ENST00000316048 MDC1Q14676 2089 aaKnown RBP3.16□□□□□ -1.9
SMCO3-201ENST00000316048 IGHV5-51A0A0C4DH38 117 aa3.16□□□□□ -1.9
SMCO3-201ENST00000316048 TRBV7-9A0A0J9YWB2 115 aa3.16□□□□□ -1.9
SMCO3-201ENST00000316048 SAGE2PA6NJ88 616 aa3.16□□□□□ -1.9
SMCO3-201ENST00000316048 CPSF4LA6NMK7 179 aaKnown RBP3.16□□□□□ -1.9
SMCO3-201ENST00000316048 H3BMQ9 156 aa3.16□□□□□ -1.9
SMCO3-201ENST00000316048 TOX3O15405 576 aaPredicted RBP3.16□□□□□ -1.9
SMCO3-201ENST00000316048 PHF1O43189 567 aaPredicted RBP3.16□□□□□ -1.9
SMCO3-201ENST00000316048 EPPINO95925 133 aa3.16□□□□□ -1.9
SMCO3-201ENST00000316048 CDK1P06493 297 aa3.16□□□□□ -1.9
SMCO3-201ENST00000316048 HTR1AP08908 422 aa3.16□□□□□ -1.9
SMCO3-201ENST00000316048 MMP11P24347 488 aa3.16□□□□□ -1.9
SMCO3-201ENST00000316048 CD1CP29017 333 aa3.16□□□□□ -1.9
SMCO3-201ENST00000316048 ACVR1BP36896 505 aa3.16□□□□□ -1.9
SMCO3-201ENST00000316048 MAP3K8P41279 467 aa3.16□□□□□ -1.9
SMCO3-201ENST00000316048 OR1D4P47884 311 aa3.16□□□□□ -1.9
SMCO3-201ENST00000316048 GABRA4P48169 554 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms