RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 SLC35B3Q9H1N7 401 aa12.96□□□□□ -0.33
COL6A2-202ENST00000310645 OR10A2Q9H208 303 aa12.96□□□□□ -0.33
COL6A2-202ENST00000310645 IGFLR1Q9H665 355 aa12.96□□□□□ -0.33
COL6A2-202ENST00000310645 TUBA4BQ9H853 241 aa12.96□□□□□ -0.33
COL6A2-202ENST00000310645 A0A1B0GV90 55 aa12.95□□□□□ -0.34
COL6A2-202ENST00000310645 SHISA8B8ZZ34 492 aa12.95□□□□□ -0.34
COL6A2-202ENST00000310645 DEDDO75618 318 aa12.95□□□□□ -0.34
COL6A2-202ENST00000310645 TNFP01375 233 aa12.95□□□□□ -0.34
COL6A2-202ENST00000310645 CARD17Q5XLA6 110 aa12.95□□□□□ -0.34
COL6A2-202ENST00000310645 C16orf47Q6ZP98 133 aaPredicted RBP12.95□□□□□ -0.34
COL6A2-202ENST00000310645 C1QL2Q7Z5L3 287 aa12.95□□□□□ -0.34
COL6A2-202ENST00000310645 SUMF2Q8NBJ7 301 aa12.95□□□□□ -0.34
COL6A2-202ENST00000310645 SLC46A1Q96NT5 459 aa12.95□□□□□ -0.34
COL6A2-202ENST00000310645 GNRHR2Q96P88 292 aa12.95□□□□□ -0.34
COL6A2-202ENST00000310645 WFDC1Q9HC57 220 aa12.95□□□□□ -0.34
COL6A2-202ENST00000310645 IGKV1D-8A0A087WSZ0 117 aa12.95□□□□□ -0.34
COL6A2-202ENST00000310645 BORCS7-ASMTA0A0B4J1R7 106 aa12.95□□□□□ -0.34
COL6A2-202ENST00000310645 MS4A18H0YCH9 400 aa12.95□□□□□ -0.34
COL6A2-202ENST00000310645 RAMP1O60894 148 aa12.95□□□□□ -0.34
COL6A2-202ENST00000310645 BIDP55957 195 aa12.95□□□□□ -0.34
COL6A2-202ENST00000310645 TLE3Q04726 772 aa12.95□□□□□ -0.34
COL6A2-202ENST00000310645 MS4A18Q3C1V0 323 aa12.95□□□□□ -0.34
COL6A2-202ENST00000310645 HIST2H3AQ71DI3 136 aa12.95□□□□□ -0.34
COL6A2-202ENST00000310645 OR5AS1Q8N127 324 aa12.95□□□□□ -0.34
COL6A2-202ENST00000310645 HDHD3Q9BSH5 251 aaPredicted RBP12.95□□□□□ -0.34
COL6A2-202ENST00000310645 TREM2Q9NZC2 230 aa12.95□□□□□ -0.34
COL6A2-202ENST00000310645 DOK5Q9P104 306 aa12.95□□□□□ -0.34
COL6A2-202ENST00000310645 FIGNL2A6NMB9 653 aa12.95□□□□□ -0.34
COL6A2-202ENST00000310645 TMEM150CB9EJG8 249 aa12.95□□□□□ -0.34
COL6A2-202ENST00000310645 SLC34A2O95436 690 aa12.95□□□□□ -0.34
COL6A2-202ENST00000310645 GAPDHP04406 335 aaKnown RBP12.95□□□□□ -0.34
COL6A2-202ENST00000310645 TSPO2Q5TGU0 170 aa12.95□□□□□ -0.34
COL6A2-202ENST00000310645 LHFPL1Q86WI0 220 aa12.95□□□□□ -0.34
COL6A2-202ENST00000310645 OR10S1Q8NGN2 331 aa12.95□□□□□ -0.34
COL6A2-202ENST00000310645 GAR1Q9NY12 217 aaKnown RBP12.95□□□□□ -0.34
COL6A2-202ENST00000310645 DANCRP0C864 163 aa12.94□□□□□ -0.34
COL6A2-202ENST00000310645 FOSL1P15407 271 aa12.94□□□□□ -0.34
COL6A2-202ENST00000310645 SLC35A1P78382 337 aa12.94□□□□□ -0.34
COL6A2-202ENST00000310645 NHLH2Q02577 135 aa12.94□□□□□ -0.34
COL6A2-202ENST00000310645 TMEM156Q8N614 296 aa12.94□□□□□ -0.34
COL6A2-202ENST00000310645 THAP3Q8WTV1 239 aaPredicted RBP12.94□□□□□ -0.34
COL6A2-202ENST00000310645 PRO1933Q9H354 126 aa12.94□□□□□ -0.34
COL6A2-202ENST00000310645 ZNF319Q9P2F9 582 aa12.94□□□□□ -0.34
COL6A2-202ENST00000310645 CXorf65A6NEN9 183 aa12.94□□□□□ -0.34
COL6A2-202ENST00000310645 IFITM10A6NMD0 228 aa12.94□□□□□ -0.34
COL6A2-202ENST00000310645 FKTNO75072 461 aa12.94□□□□□ -0.34
COL6A2-202ENST00000310645 GABRA4P48169 554 aa12.94□□□□□ -0.34
COL6A2-202ENST00000310645 FXYD4P59646 89 aa12.94□□□□□ -0.34
COL6A2-202ENST00000310645 RHEBQ15382 184 aa12.94□□□□□ -0.34
COL6A2-202ENST00000310645 PCK2Q16822 640 aa12.94□□□□□ -0.34
COL6A2-202ENST00000310645 ASB10Q8WXI3 467 aa12.94□□□□□ -0.34
COL6A2-202ENST00000310645 MARS2Q96GW9 593 aaKnown RBP12.94□□□□□ -0.34
COL6A2-202ENST00000310645 MEGF10Q96KG7 1140 aa12.94□□□□□ -0.34
COL6A2-202ENST00000310645 C1orf147Q96MC9 270 aaPredicted RBP12.94□□□□□ -0.34
COL6A2-202ENST00000310645 PBDC1Q9BVG4 233 aa12.94□□□□□ -0.34
COL6A2-202ENST00000310645 REV3LO60673 3130 aa12.94□□□□□ -0.34
COL6A2-202ENST00000310645 A0A1W2PQF6 199 aa12.94□□□□□ -0.34
COL6A2-202ENST00000310645 FRG2CA6NGY1 282 aa12.94□□□□□ -0.34
COL6A2-202ENST00000310645 ATXN7O15265 892 aaPredicted RBP12.94□□□□□ -0.34
COL6A2-202ENST00000310645 HOXA5P20719 270 aa12.94□□□□□ -0.34
COL6A2-202ENST00000310645 GABRR1P24046 479 aa12.94□□□□□ -0.34
COL6A2-202ENST00000310645 CHATP28329 748 aa12.94□□□□□ -0.34
COL6A2-202ENST00000310645 FOXL2P58012 376 aa12.94□□□□□ -0.34
COL6A2-202ENST00000310645 TAS2R46P59540 309 aa12.94□□□□□ -0.34
COL6A2-202ENST00000310645 GFI1BQ5VTD9 330 aa12.94□□□□□ -0.34
COL6A2-202ENST00000310645 FAM57BQ71RH2 274 aa12.94□□□□□ -0.34
COL6A2-202ENST00000310645 UBAC2Q8NBM4 344 aa12.94□□□□□ -0.34
COL6A2-202ENST00000310645 LIN37Q96GY3 246 aaPredicted RBP12.94□□□□□ -0.34
COL6A2-202ENST00000310645 SCRT1Q9BWW7 348 aa12.94□□□□□ -0.34
COL6A2-202ENST00000310645 MASP2O00187 686 aa12.93□□□□□ -0.34
COL6A2-202ENST00000310645 NPIPB7O75200 414 aa12.93□□□□□ -0.34
COL6A2-202ENST00000310645 MBPP02686 304 aaPredicted RBP12.93□□□□□ -0.34
COL6A2-202ENST00000310645 ZNF84P51523 738 aa12.93□□□□□ -0.34
COL6A2-202ENST00000310645 HSF1Q00613 529 aa12.93□□□□□ -0.34
COL6A2-202ENST00000310645 DEGS2Q6QHC5 323 aa12.93□□□□□ -0.34
COL6A2-202ENST00000310645 SSX9Q7RTT3 188 aa12.93□□□□□ -0.34
COL6A2-202ENST00000310645 C6orf201Q7Z4U5 140 aa12.93□□□□□ -0.34
COL6A2-202ENST00000310645 SGK3Q96BR1 496 aa12.93□□□□□ -0.34
COL6A2-202ENST00000310645 TGIF2Q9GZN2 237 aa12.93□□□□□ -0.34
COL6A2-202ENST00000310645 LMAN1LQ9HAT1 526 aa12.93□□□□□ -0.34
COL6A2-202ENST00000310645 B3GALT1Q9Y5Z6 326 aa12.93□□□□□ -0.34
COL6A2-202ENST00000310645 A6NIZ1 184 aa12.93□□□□□ -0.34
COL6A2-202ENST00000310645 CEACAM18A8MTB9 384 aa12.93□□□□□ -0.34
COL6A2-202ENST00000310645 HPNP05981 417 aa12.93□□□□□ -0.34
COL6A2-202ENST00000310645 KLK2P20151 261 aa12.93□□□□□ -0.34
COL6A2-202ENST00000310645 TAGLN2P37802 199 aaKnown RBP12.93□□□□□ -0.34
COL6A2-202ENST00000310645 PMELP40967 661 aa12.93□□□□□ -0.34
COL6A2-202ENST00000310645 ZNF121P58317 390 aaPredicted RBP12.93□□□□□ -0.34
COL6A2-202ENST00000310645 RAP1BP61224 184 aa12.93□□□□□ -0.34
COL6A2-202ENST00000310645 SPNS3Q6ZMD2 512 aa12.93□□□□□ -0.34
COL6A2-202ENST00000310645 GRINAQ7Z429 371 aa12.93□□□□□ -0.34
COL6A2-202ENST00000310645 OR2AJ1Q8NGZ0 328 aa12.93□□□□□ -0.34
COL6A2-202ENST00000310645 LYPD6BQ8NI32 183 aa12.93□□□□□ -0.34
COL6A2-202ENST00000310645 ADIPOR1Q96A54 375 aa12.93□□□□□ -0.34
COL6A2-202ENST00000310645 ZNF700Q9H0M5 742 aa12.93□□□□□ -0.34
COL6A2-202ENST00000310645 CDRT15L2A8MXV6 281 aa12.93□□□□□ -0.34
COL6A2-202ENST00000310645 STMND1H3BQB6 276 aa12.93□□□□□ -0.34
COL6A2-202ENST00000310645 GNRH1P01148 92 aa12.93□□□□□ -0.34
COL6A2-202ENST00000310645 CDX1P47902 265 aaPredicted RBP12.93□□□□□ -0.34
COL6A2-202ENST00000310645 RGS19P49795 217 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms