RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 TMEM225BP0DP42 221 aa4.3□□□□□ -1.72
CAST-201ENST00000309190 CAPZA1P52907 286 aa4.3□□□□□ -1.72
CAST-201ENST00000309190 FCN2Q15485 313 aa4.3□□□□□ -1.72
CAST-201ENST00000309190 BCL2L15Q5TBC7 163 aa4.3□□□□□ -1.72
CAST-201ENST00000309190 SP5Q6BEB4 398 aaPredicted RBP4.3□□□□□ -1.72
CAST-201ENST00000309190 ZNF627Q7L945 461 aa4.3□□□□□ -1.72
CAST-201ENST00000309190 LRP11Q86VZ4 500 aa4.3□□□□□ -1.72
CAST-201ENST00000309190 LRRC28Q86X40 367 aaPredicted RBP4.3□□□□□ -1.72
CAST-201ENST00000309190 Q8N402 240 aa4.3□□□□□ -1.72
CAST-201ENST00000309190 OR1J1Q8NGS3 322 aa4.3□□□□□ -1.72
CAST-201ENST00000309190 OR1S1Q8NH92 325 aa4.3□□□□□ -1.72
CAST-201ENST00000309190 GTF3AQ92664 365 aaKnown RBP4.3□□□□□ -1.72
CAST-201ENST00000309190 GPR84Q9NQS5 396 aa4.3□□□□□ -1.72
CAST-201ENST00000309190 ENOPH1Q9UHY7 261 aa4.3□□□□□ -1.72
CAST-201ENST00000309190 B3GALT5Q9Y2C3 310 aa4.3□□□□□ -1.72
CAST-201ENST00000309190 DOCK11Q5JSL3 2073 aa4.3□□□□□ -1.72
CAST-201ENST00000309190 A0A0G2JNJ9 132 aa4.3□□□□□ -1.72
CAST-201ENST00000309190 SNTNA6NMZ2 147 aa4.3□□□□□ -1.72
CAST-201ENST00000309190 GJE1A6NN92 205 aa4.3□□□□□ -1.72
CAST-201ENST00000309190 DNASE2O00115 360 aaPredicted RBP4.3□□□□□ -1.72
CAST-201ENST00000309190 TO15178 435 aa4.3□□□□□ -1.72
CAST-201ENST00000309190 PIN1P1O15428 100 aa4.3□□□□□ -1.72
CAST-201ENST00000309190 LILRA1O75019 489 aa4.3□□□□□ -1.72
CAST-201ENST00000309190 PSMA1P25786 263 aaKnown RBP4.3□□□□□ -1.72
CAST-201ENST00000309190 ALDH3B1P43353 468 aa4.3□□□□□ -1.72
CAST-201ENST00000309190 DAP3P51398 398 aaKnown RBP4.3□□□□□ -1.72
CAST-201ENST00000309190 DEFA1P59665 94 aa4.3□□□□□ -1.72
CAST-201ENST00000309190 DEFA3P59666 94 aa4.3□□□□□ -1.72
CAST-201ENST00000309190 KLRB1Q12918 225 aa4.3□□□□□ -1.72
CAST-201ENST00000309190 ZNF273Q14593 569 aa4.3□□□□□ -1.72
CAST-201ENST00000309190 ACSF3Q4G176 576 aaPredicted RBP4.3□□□□□ -1.72
CAST-201ENST00000309190 TMEM81Q6P7N7 255 aa4.3□□□□□ -1.72
CAST-201ENST00000309190 DPY19L2P2Q6ZN68 376 aa4.3□□□□□ -1.72
CAST-201ENST00000309190 TGIF2LYQ8IUE0 185 aa4.3□□□□□ -1.72
CAST-201ENST00000309190 FAM219AQ8IW50 185 aa4.3□□□□□ -1.72
CAST-201ENST00000309190 OR13C3Q8NGS6 347 aa4.3□□□□□ -1.72
CAST-201ENST00000309190 CPNE4Q96A23 557 aaPredicted RBP4.3□□□□□ -1.72
CAST-201ENST00000309190 DERL3Q96Q80 235 aa4.3□□□□□ -1.72
CAST-201ENST00000309190 NOX3Q9HBY0 568 aa4.3□□□□□ -1.72
CAST-201ENST00000309190 CMC2Q9NRP2 79 aa4.3□□□□□ -1.72
CAST-201ENST00000309190 MRPL22Q9NWU5 206 aaKnown RBP4.3□□□□□ -1.72
CAST-201ENST00000309190 Q9UFV3 132 aa4.3□□□□□ -1.72
CAST-201ENST00000309190 ERRFI1Q9UJM3 462 aaPredicted RBP4.3□□□□□ -1.72
CAST-201ENST00000309190 ING4Q9UNL4 249 aa4.3□□□□□ -1.72
CAST-201ENST00000309190 TPPPO94811 219 aa4.29□□□□□ -1.72
CAST-201ENST00000309190 ZFPL1O95159 310 aa4.29□□□□□ -1.72
CAST-201ENST00000309190 ASAH2BP0C7U1 165 aa4.29□□□□□ -1.72
CAST-201ENST00000309190 SNRPBP14678 240 aaKnown RBP4.29□□□□□ -1.72
CAST-201ENST00000309190 SERPINA2P20848 420 aa4.29□□□□□ -1.72
CAST-201ENST00000309190 MPGP29372 298 aa4.29□□□□□ -1.72
CAST-201ENST00000309190 S100A5P33763 92 aa4.29□□□□□ -1.72
CAST-201ENST00000309190 GABRA2P47869 451 aa4.29□□□□□ -1.72
CAST-201ENST00000309190 PTH2RP49190 550 aa4.29□□□□□ -1.72
CAST-201ENST00000309190 CEBPDP49716 269 aaPredicted RBP4.29□□□□□ -1.72
CAST-201ENST00000309190 RIDAP52758 137 aaKnown RBP4.29□□□□□ -1.72
CAST-201ENST00000309190 NANOS3P60323 173 aaKnown RBP4.29□□□□□ -1.72
CAST-201ENST00000309190 CD83Q01151 205 aa4.29□□□□□ -1.72
CAST-201ENST00000309190 RIPPLY1Q0D2K3 151 aa4.29□□□□□ -1.72
CAST-201ENST00000309190 SNTB2Q13425 540 aaKnown RBP4.29□□□□□ -1.72
CAST-201ENST00000309190 DYRK1AQ13627 763 aa4.29□□□□□ -1.72
CAST-201ENST00000309190 EDDM3AQ14507 147 aa4.29□□□□□ -1.72
CAST-201ENST00000309190 SNAI3Q3KNW1 292 aa4.29□□□□□ -1.72
CAST-201ENST00000309190 METTL11BQ5VVY1 283 aa4.29□□□□□ -1.72
CAST-201ENST00000309190 TMPRSS11FQ6ZWK6 438 aa4.29□□□□□ -1.72
CAST-201ENST00000309190 FAM214BQ7L5A3 538 aa4.29□□□□□ -1.72
CAST-201ENST00000309190 KLHL36Q8N4N3 616 aa4.29□□□□□ -1.72
CAST-201ENST00000309190 MFSD8Q8NHS3 518 aa4.29□□□□□ -1.72
CAST-201ENST00000309190 DYRK2Q92630 601 aa4.29□□□□□ -1.72
CAST-201ENST00000309190 PHF21AQ96BD5 680 aa4.29□□□□□ -1.72
CAST-201ENST00000309190 CMBLQ96DG6 245 aa4.29□□□□□ -1.72
CAST-201ENST00000309190 CHST6Q9GZX3 395 aa4.29□□□□□ -1.72
CAST-201ENST00000309190 NRIP3Q9NQ35 241 aa4.29□□□□□ -1.72
CAST-201ENST00000309190 PCDHB16Q9NRJ7 776 aa4.29□□□□□ -1.72
CAST-201ENST00000309190 CA10Q9NS85 328 aa4.29□□□□□ -1.72
CAST-201ENST00000309190 ZNF319Q9P2F9 582 aa4.29□□□□□ -1.72
CAST-201ENST00000309190 STARD10Q9Y365 291 aa4.29□□□□□ -1.72
CAST-201ENST00000309190 PTPRBP23467 1997 aa4.29□□□□□ -1.72
CAST-201ENST00000309190 DSCAMO60469 2012 aa4.29□□□□□ -1.72
CAST-201ENST00000309190 IGHV3OR16-10A0A075B7F0 116 aa4.29□□□□□ -1.72
CAST-201ENST00000309190 MPTX1A8MV57 137 aa4.29□□□□□ -1.72
CAST-201ENST00000309190 TIMM8AO60220 97 aaPredicted RBP4.29□□□□□ -1.72
CAST-201ENST00000309190 UCHL1P09936 223 aa4.29□□□□□ -1.72
CAST-201ENST00000309190 ZNF20P17024 532 aa4.29□□□□□ -1.72
CAST-201ENST00000309190 GABRR1P24046 479 aa4.29□□□□□ -1.72
CAST-201ENST00000309190 CD82P27701 267 aa4.29□□□□□ -1.72
CAST-201ENST00000309190 APLNRP35414 380 aa4.29□□□□□ -1.72
CAST-201ENST00000309190 GBX2P52951 348 aaPredicted RBP4.29□□□□□ -1.72
CAST-201ENST00000309190 TGFBR3Q03167 851 aa4.29□□□□□ -1.72
CAST-201ENST00000309190 SLC18B1Q6NT16 456 aa4.29□□□□□ -1.72
CAST-201ENST00000309190 Q6ZS92 163 aa4.29□□□□□ -1.72
CAST-201ENST00000309190 MRPL21Q7Z2W9 205 aaKnown RBP4.29□□□□□ -1.72
CAST-201ENST00000309190 ZIC4Q8N9L1 334 aa4.29□□□□□ -1.72
CAST-201ENST00000309190 ACOT12Q8WYK0 555 aa4.29□□□□□ -1.72
CAST-201ENST00000309190 AKAP1Q92667 903 aaKnown RBP eCLIP4.29□□□□□ -1.72
CAST-201ENST00000309190 ZBTB8AQ96BR9 441 aa4.29□□□□□ -1.72
CAST-201ENST00000309190 KCTD7Q96MP8 289 aa4.29□□□□□ -1.72
CAST-201ENST00000309190 OR2M2Q96R28 347 aa4.29□□□□□ -1.72
CAST-201ENST00000309190 S100A13Q99584 98 aa4.29□□□□□ -1.72
CAST-201ENST00000309190 CNTD2Q9H8S5 307 aa4.29□□□□□ -1.72
CAST-201ENST00000309190 DYNLRB1Q9NP97 96 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms