RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 HCKP08631 526 aa16.16■□□□□ 0.18
PDLIM3-202ENST00000284770 PRKACBP22694 351 aa16.16■□□□□ 0.18
PDLIM3-202ENST00000284770 CA6P23280 308 aa16.16■□□□□ 0.18
PDLIM3-202ENST00000284770 SELENOVP59797 346 aa16.16■□□□□ 0.18
PDLIM3-202ENST00000284770 C1orf100Q5SVJ3 147 aa16.16■□□□□ 0.18
PDLIM3-202ENST00000284770 CNIH2Q6PI25 160 aa16.16■□□□□ 0.18
PDLIM3-202ENST00000284770 LRRC28Q86X40 367 aaPredicted RBP16.16■□□□□ 0.18
PDLIM3-202ENST00000284770 ZDHHC23Q8IYP9 409 aa16.16■□□□□ 0.18
PDLIM3-202ENST00000284770 ACBD4Q8NC06 268 aa16.16■□□□□ 0.18
PDLIM3-202ENST00000284770 ZNF671Q8TAW3 534 aa16.16■□□□□ 0.18
PDLIM3-202ENST00000284770 NPRL2Q8WTW4 380 aa16.16■□□□□ 0.18
PDLIM3-202ENST00000284770 MRPL24Q96A35 216 aaKnown RBP16.16■□□□□ 0.18
PDLIM3-202ENST00000284770 SLC25A28Q96A46 364 aa16.16■□□□□ 0.18
PDLIM3-202ENST00000284770 SOSTQ9BQB4 213 aa16.16■□□□□ 0.18
PDLIM3-202ENST00000284770 TMEM204Q9BSN7 226 aa16.16■□□□□ 0.18
PDLIM3-202ENST00000284770 NEK6Q9HC98 313 aa16.16■□□□□ 0.18
PDLIM3-202ENST00000284770 CGGBP1Q9UFW8 167 aaPredicted RBP16.16■□□□□ 0.18
PDLIM3-202ENST00000284770 SLC7A11Q9UPY5 501 aa16.16■□□□□ 0.18
PDLIM3-202ENST00000284770 DOPEY1Q5JWR5 2465 aa16.16■□□□□ 0.18
PDLIM3-202ENST00000284770 CLEC18AA5D8T8 446 aa16.15■□□□□ 0.18
PDLIM3-202ENST00000284770 ZNF93P35789 620 aaPredicted RBP16.15■□□□□ 0.18
PDLIM3-202ENST00000284770 ZNF79Q15937 498 aa16.15■□□□□ 0.18
PDLIM3-202ENST00000284770 CEACAM21Q3KPI0 293 aa16.15■□□□□ 0.18
PDLIM3-202ENST00000284770 CLEC18BQ6UXF7 455 aa16.15■□□□□ 0.18
PDLIM3-202ENST00000284770 JAGN1Q8N5M9 183 aa16.15■□□□□ 0.18
PDLIM3-202ENST00000284770 CLEC18CQ8NCF0 446 aa16.15■□□□□ 0.18
PDLIM3-202ENST00000284770 HS3ST6Q96QI5 342 aa16.15■□□□□ 0.18
PDLIM3-202ENST00000284770 NKX3-1Q99801 234 aaPredicted RBP16.15■□□□□ 0.18
PDLIM3-202ENST00000284770 SYT3Q9BQG1 590 aa16.15■□□□□ 0.18
PDLIM3-202ENST00000284770 MRPL37Q9BZE1 423 aaKnown RBP16.15■□□□□ 0.18
PDLIM3-202ENST00000284770 METTL17Q9H7H0 456 aaPredicted RBP16.15■□□□□ 0.18
PDLIM3-202ENST00000284770 CYSLTR2Q9NS75 346 aa16.15■□□□□ 0.18
PDLIM3-202ENST00000284770 ADAM30Q9UKF2 790 aa16.15■□□□□ 0.18
PDLIM3-202ENST00000284770 VSTM5A8MXK1 200 aa16.15■□□□□ 0.18
PDLIM3-202ENST00000284770 PLAUP00749 431 aa16.15■□□□□ 0.18
PDLIM3-202ENST00000284770 APOA1P02647 267 aa16.15■□□□□ 0.18
PDLIM3-202ENST00000284770 FUT6P51993 359 aa16.15■□□□□ 0.18
PDLIM3-202ENST00000284770 SCAND1P57086 179 aa16.15■□□□□ 0.18
PDLIM3-202ENST00000284770 ADIPOQQ15848 244 aa16.15■□□□□ 0.18
PDLIM3-202ENST00000284770 ITPKCQ96DU7 683 aa16.15■□□□□ 0.18
PDLIM3-202ENST00000284770 CMTM3Q96MX0 182 aa16.15■□□□□ 0.18
PDLIM3-202ENST00000284770 SPACA5Q96QH8 159 aa16.15■□□□□ 0.18
PDLIM3-202ENST00000284770 HIST1H2AAQ96QV6 131 aa16.15■□□□□ 0.18
PDLIM3-202ENST00000284770 SDHCQ99643 169 aaPredicted RBP16.15■□□□□ 0.18
PDLIM3-202ENST00000284770 UQCC2Q9BRT2 126 aa16.15■□□□□ 0.18
PDLIM3-202ENST00000284770 SLC22A4Q9H015 551 aa16.15■□□□□ 0.18
PDLIM3-202ENST00000284770 PALMDQ9NP74 551 aa16.15■□□□□ 0.18
PDLIM3-202ENST00000284770 TMEM100Q9NV29 134 aa16.15■□□□□ 0.18
PDLIM3-202ENST00000284770 FABP12A6NFH5 140 aa16.14■□□□□ 0.17
PDLIM3-202ENST00000284770 E7EQL1 145 aa16.14■□□□□ 0.17
PDLIM3-202ENST00000284770 OR4A8P0C604 315 aa16.14■□□□□ 0.17
PDLIM3-202ENST00000284770 HTR2CP28335 458 aa16.14■□□□□ 0.17
PDLIM3-202ENST00000284770 DAZAP2Q15038 168 aaPredicted RBP16.14■□□□□ 0.17
PDLIM3-202ENST00000284770 KISS1Q15726 138 aa16.14■□□□□ 0.17
PDLIM3-202ENST00000284770 RAB11BQ15907 218 aa16.14■□□□□ 0.17
PDLIM3-202ENST00000284770 MEX3BQ6ZN04 569 aaKnown RBP16.14■□□□□ 0.17
PDLIM3-202ENST00000284770 OR6M1Q8NGM8 313 aa16.14■□□□□ 0.17
PDLIM3-202ENST00000284770 HPSE2Q8WWQ2 592 aa16.14■□□□□ 0.17
PDLIM3-202ENST00000284770 OR5P3Q8WZ94 311 aa16.14■□□□□ 0.17
PDLIM3-202ENST00000284770 SLC25A38Q96DW6 304 aa16.14■□□□□ 0.17
PDLIM3-202ENST00000284770 BORCS8Q96FH0 119 aa16.14■□□□□ 0.17
PDLIM3-202ENST00000284770 SORCS2Q96PQ0 1159 aa16.14■□□□□ 0.17
PDLIM3-202ENST00000284770 MYEF2Q9P2K5 600 aaKnown RBP16.14■□□□□ 0.17
PDLIM3-202ENST00000284770 USP9XQ93008 2570 aaPredicted RBP16.14■□□□□ 0.17
PDLIM3-202ENST00000284770 FAM230AA0A1W2PPH8 454 aa16.13■□□□□ 0.17
PDLIM3-202ENST00000284770 RBP2P50120 134 aa16.13■□□□□ 0.17
PDLIM3-202ENST00000284770 MTCP1P56278 107 aa16.13■□□□□ 0.17
PDLIM3-202ENST00000284770 P2RY14Q15391 338 aa16.13■□□□□ 0.17
PDLIM3-202ENST00000284770 UBE2NLQ5JXB2 153 aa16.13■□□□□ 0.17
PDLIM3-202ENST00000284770 CRIP3Q6Q6R5 217 aa16.13■□□□□ 0.17
PDLIM3-202ENST00000284770 METAP1DQ6UB28 335 aaPredicted RBP16.13■□□□□ 0.17
PDLIM3-202ENST00000284770 LHFPL2Q6ZUX7 228 aa16.13■□□□□ 0.17
PDLIM3-202ENST00000284770 RNF144BQ7Z419 303 aa16.13■□□□□ 0.17
PDLIM3-202ENST00000284770 OR51D1Q8NGF3 324 aa16.13■□□□□ 0.17
PDLIM3-202ENST00000284770 OR5A2Q8NGI9 324 aa16.13■□□□□ 0.17
PDLIM3-202ENST00000284770 OR4D6Q8NGJ1 314 aa16.13■□□□□ 0.17
PDLIM3-202ENST00000284770 OR13G1Q8NGZ3 307 aa16.13■□□□□ 0.17
PDLIM3-202ENST00000284770 LILRB1Q8NHL6 650 aaPredicted RBP16.13■□□□□ 0.17
PDLIM3-202ENST00000284770 NEUROG1Q92886 237 aa16.13■□□□□ 0.17
PDLIM3-202ENST00000284770 DVL3Q92997 716 aaPredicted RBP16.13■□□□□ 0.17
PDLIM3-202ENST00000284770 CPNE2Q96FN4 548 aaPredicted RBP16.13■□□□□ 0.17
PDLIM3-202ENST00000284770 PLK3Q9H4B4 646 aa16.13■□□□□ 0.17
PDLIM3-202ENST00000284770 CNTD2Q9H8S5 307 aa16.13■□□□□ 0.17
PDLIM3-202ENST00000284770 ETV7Q9Y603 341 aa16.13■□□□□ 0.17
PDLIM3-202ENST00000284770 A0A1B0GWJ7 208 aa16.13■□□□□ 0.17
PDLIM3-202ENST00000284770 FAM25AB3EWG3 89 aa16.13■□□□□ 0.17
PDLIM3-202ENST00000284770 FAM25CB3EWG5 89 aa16.13■□□□□ 0.17
PDLIM3-202ENST00000284770 FAM25GB3EWG6 89 aa16.13■□□□□ 0.17
PDLIM3-202ENST00000284770 PRSS44E7EML9 344 aa16.13■□□□□ 0.17
PDLIM3-202ENST00000284770 MMP15P51511 669 aa16.13■□□□□ 0.17
PDLIM3-202ENST00000284770 RIN1Q13671 783 aa16.13■□□□□ 0.17
PDLIM3-202ENST00000284770 FAM131AQ6UXB0 335 aa16.13■□□□□ 0.17
PDLIM3-202ENST00000284770 Q6ZR03 302 aa16.13■□□□□ 0.17
PDLIM3-202ENST00000284770 FAM3DQ96BQ1 224 aa16.13■□□□□ 0.17
PDLIM3-202ENST00000284770 GPER1Q99527 375 aa16.13■□□□□ 0.17
PDLIM3-202ENST00000284770 SRRQ9GZT4 340 aa16.13■□□□□ 0.17
PDLIM3-202ENST00000284770 CISD1Q9NZ45 108 aaKnown RBP16.13■□□□□ 0.17
PDLIM3-202ENST00000284770 TAAR3PQ9P1P4 343 aa16.13■□□□□ 0.17
PDLIM3-202ENST00000284770 EXTL2Q9UBQ6 330 aa16.13■□□□□ 0.17
PDLIM3-202ENST00000284770 IGKV1-27A0A075B6S5 117 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms